RNA–Protein interactions for RNA: YGR134W

CAF130, Transcript of Subunit of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF130, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF130YGR134W DIF1O13577 133 aa3.65□□□□□ -1.82
CAF130YGR134W FUN12P39730 1002 aaKnown RBP3.65□□□□□ -1.82
CAF130YGR134W BRE2P43132 505 aa3.65□□□□□ -1.82
CAF130YGR134W ALK1P43633 760 aaKnown RBP3.65□□□□□ -1.82
CAF130YGR134W CUL3P53202 744 aa3.65□□□□□ -1.82
CAF130YGR134W DSL1P53847 754 aa3.65□□□□□ -1.82
CAF130YGR134W INA17Q02888 182 aa3.65□□□□□ -1.82
CAF130YGR134W CWC21Q03375 135 aaKnown RBP3.65□□□□□ -1.82
CAF130YGR134W ATG38Q05789 226 aaKnown RBP3.65□□□□□ -1.82
CAF130YGR134W ADE13Q05911 482 aaKnown RBP3.65□□□□□ -1.82
CAF130YGR134W TGS1Q12052 315 aa3.65□□□□□ -1.82
CAF130YGR134W UPC2Q12151 913 aa3.65□□□□□ -1.82
CAF130YGR134W YLL054CQ12244 843 aa3.65□□□□□ -1.82
CAF130YGR134W SEC53P07283 254 aaKnown RBP3.65□□□□□ -1.83
CAF130YGR134W HMX1P32339 317 aa3.65□□□□□ -1.83
CAF130YGR134W MSS1P32559 526 aaPredicted RBP3.65□□□□□ -1.83
CAF130YGR134W YSC84P32793 468 aa3.65□□□□□ -1.83
CAF130YGR134W LTV1P34078 463 aa3.65□□□□□ -1.83
CAF130YGR134W CEM1P39525 442 aa3.65□□□□□ -1.83
CAF130YGR134W LRO1P40345 661 aa3.65□□□□□ -1.83
CAF130YGR134W TIM21P53220 239 aa3.65□□□□□ -1.83
CAF130YGR134W UTP6Q02354 440 aaKnown RBP3.65□□□□□ -1.83
CAF130YGR134W YDR444WQ04093 687 aa3.65□□□□□ -1.83
CAF130YGR134W BOP2Q06150 570 aa3.65□□□□□ -1.83
CAF130YGR134W RCN2Q12044 265 aa3.65□□□□□ -1.83
CAF130YGR134W YOR022CQ12204 715 aa3.65□□□□□ -1.83
CAF130YGR134W HER1Q12276 1246 aa3.65□□□□□ -1.83
CAF130YGR134W NDJ1Q12366 352 aa3.65□□□□□ -1.83
CAF130YGR134W YLR358CO13565 187 aa3.65□□□□□ -1.83
CAF130YGR134W PRE10P21242 288 aaKnown RBP RIP-Chip data3.65□□□□□ -1.83not detected
CAF130YGR134W PAP1P29468 568 aaKnown RBP3.65□□□□□ -1.83
CAF130YGR134W RRT2P38332 387 aa3.65□□□□□ -1.83
CAF130YGR134W LIN1P38852 340 aaPredicted RBP3.65□□□□□ -1.83
CAF130YGR134W ELO3P40319 345 aa3.65□□□□□ -1.83
CAF130YGR134W ATF1P40353 525 aa3.65□□□□□ -1.83
CAF130YGR134W BPL1P48445 690 aaPredicted RBP3.65□□□□□ -1.83
CAF130YGR134W YNL143CP53908 130 aa3.65□□□□□ -1.83
CAF130YGR134W VPS36Q06696 566 aa3.65□□□□□ -1.83
CAF130YGR134W RRD2Q12461 358 aa3.65□□□□□ -1.83
CAF130YGR134W SAC3P46674 1301 aa3.64□□□□□ -1.83
CAF130YGR134W HXT3P32466 567 aaKnown RBP3.64□□□□□ -1.83
CAF130YGR134W PPE1P38796 400 aa3.64□□□□□ -1.83
CAF130YGR134W PEX18P38855 283 aa3.64□□□□□ -1.83
CAF130YGR134W BIT61P47041 543 aa3.64□□□□□ -1.83
CAF130YGR134W COS12P53053 380 aa3.64□□□□□ -1.83
CAF130YGR134W GEP3Q08622 556 aa3.64□□□□□ -1.83
CAF130YGR134W BUD7Q08754 746 aa3.64□□□□□ -1.83
CAF130YGR134W LPD1P09624 499 aaKnown RBP3.64□□□□□ -1.83
CAF130YGR134W YML003WP0CF16 290 aa3.64□□□□□ -1.83
CAF130YGR134W MSP1P28737 362 aa3.64□□□□□ -1.83
CAF130YGR134W STE14P32584 239 aa3.64□□□□□ -1.83
CAF130YGR134W RML2P32611 393 aa3.64□□□□□ -1.83
CAF130YGR134W ALY1P36117 915 aa3.64□□□□□ -1.83
CAF130YGR134W AHP1P38013 176 aaKnown RBP3.64□□□□□ -1.83
CAF130YGR134W VID24P38263 362 aa3.64□□□□□ -1.83
CAF130YGR134W TOS1P38288 455 aa3.64□□□□□ -1.83
CAF130YGR134W SFB3P38810 929 aa3.64□□□□□ -1.83
CAF130YGR134W MTG2P38860 518 aa3.64□□□□□ -1.83
CAF130YGR134W CAK1P43568 368 aaPredicted RBP3.64□□□□□ -1.83
CAF130YGR134W PIB2P53191 635 aa3.64□□□□□ -1.83
CAF130YGR134W TY1A-DR2Q03964 440 aaKnown RBP3.64□□□□□ -1.83
CAF130YGR134W SEG1Q04279 960 aa3.64□□□□□ -1.83
CAF130YGR134W CDA1Q06702 301 aa3.64□□□□□ -1.83
CAF130YGR134W CLP1Q08685 445 aaPredicted RBP3.64□□□□□ -1.83
CAF130YGR134W AVL9Q12500 764 aa3.64□□□□□ -1.83
CAF130YGR134W YJR112W-AQ3E743 109 aa3.64□□□□□ -1.83
CAF130YGR134W DFR1P07807 211 aaKnown RBP RIP-Chip data3.63□□□□□ -1.83not detected
CAF130YGR134W HMG2P12684 1045 aa3.63□□□□□ -1.83
CAF130YGR134W DMC1P25453 334 aa3.63□□□□□ -1.83
CAF130YGR134W RPC82P32349 654 aa3.63□□□□□ -1.83
CAF130YGR134W TPO5P36029 618 aa3.63□□□□□ -1.83
CAF130YGR134W YKL023WP36103 277 aaKnown RBP3.63□□□□□ -1.83
CAF130YGR134W FTR1P40088 404 aa3.63□□□□□ -1.83
CAF130YGR134W YMR147WP40218 223 aaKnown RBP3.63□□□□□ -1.83
CAF130YGR134W YJL171CP46992 396 aa3.63□□□□□ -1.83
CAF130YGR134W TAF4P50105 388 aa3.63□□□□□ -1.83
CAF130YGR134W YBP2P53169 641 aa3.63□□□□□ -1.83
CAF130YGR134W RIA1P53893 1110 aa3.63□□□□□ -1.83
CAF130YGR134W SMA2Q04658 369 aa3.63□□□□□ -1.83
CAF130YGR134W AFT2Q08957 416 aa3.63□□□□□ -1.83
CAF130YGR134W NTO1Q12311 748 aa3.63□□□□□ -1.83
CAF130YGR134W IDH2P28241 369 aaKnown RBP3.63□□□□□ -1.83
CAF130YGR134W EFB1P32471 206 aaKnown RBP3.63□□□□□ -1.83
CAF130YGR134W KRE6P32486 720 aa3.63□□□□□ -1.83
CAF130YGR134W AUR1P36107 401 aaPredicted RBP3.63□□□□□ -1.83
CAF130YGR134W CTF8P38877 133 aa3.63□□□□□ -1.83
CAF130YGR134W ASE1P50275 885 aa3.63□□□□□ -1.83
CAF130YGR134W ART5P53244 586 aaKnown RBP3.63□□□□□ -1.83
CAF130YGR134W DUS1P53759 423 aaKnown RBP3.63□□□□□ -1.83
CAF130YGR134W GYL1Q04322 720 aa3.63□□□□□ -1.83
CAF130YGR134W STP3Q05937 343 aa3.63□□□□□ -1.83
CAF130YGR134W SKM1Q12469 655 aa3.63□□□□□ -1.83
CAF130YGR134W PCK1P10963 549 aa3.63□□□□□ -1.83
CAF130YGR134W ELO2P25358 347 aa3.63□□□□□ -1.83
CAF130YGR134W PRE2P30656 287 aaKnown RBP3.63□□□□□ -1.83
CAF130YGR134W TIF3P34167 436 aaKnown RBP3.63□□□□□ -1.83
CAF130YGR134W JHD1P40034 492 aa3.63□□□□□ -1.83
CAF130YGR134W MMM1P41800 426 aa3.63□□□□□ -1.83
CAF130YGR134W SQS1P53866 767 aaKnown RBP3.63□□□□□ -1.83
CAF130YGR134W KTR6P54070 446 aa3.63□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms