RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C FHN1P53279 174 aa2.49□□□□□ -2.01
PRE4YFR050C ATG4P53867 494 aa2.49□□□□□ -2.01
PRE4YFR050C HER2Q03557 464 aa2.49□□□□□ -2.01
PRE4YFR050C SEG1Q04279 960 aa2.49□□□□□ -2.01
PRE4YFR050C VBA4Q04602 768 aaKnown RBP2.49□□□□□ -2.01
PRE4YFR050C THI73Q07904 523 aa2.49□□□□□ -2.01
PRE4YFR050C VHS3Q08438 674 aa2.49□□□□□ -2.01
PRE4YFR050C YDL211CQ12121 372 aa2.49□□□□□ -2.01
PRE4YFR050C DCS2Q12123 353 aa2.49□□□□□ -2.01
PRE4YFR050C RPL7BQ12213 244 aaKnown RBP2.49□□□□□ -2.01
PRE4YFR050C PRS5Q12265 496 aaKnown RBP2.49□□□□□ -2.01
PRE4YFR050C POM34Q12445 299 aa2.49□□□□□ -2.01
PRE4YFR050C SEC39Q12745 709 aa2.49□□□□□ -2.01
PRE4YFR050C THR1P17423 357 aaKnown RBP2.48□□□□□ -2.01
PRE4YFR050C PRP28P23394 588 aa2.48□□□□□ -2.01
PRE4YFR050C NTH1P32356 751 aa2.48□□□□□ -2.01
PRE4YFR050C PPZ2P33329 710 aa2.48□□□□□ -2.01
PRE4YFR050C RXT2P38255 430 aa2.48□□□□□ -2.01
PRE4YFR050C FTH1P38310 465 aa2.48□□□□□ -2.01
PRE4YFR050C BIT2P38346 545 aa2.48□□□□□ -2.01
PRE4YFR050C YIL166CP40445 542 aa2.48□□□□□ -2.01
PRE4YFR050C YJR142WP47173 342 aa2.48□□□□□ -2.01
PRE4YFR050C NUP84P52891 726 aa2.48□□□□□ -2.01
PRE4YFR050C COQ6P53318 479 aa2.48□□□□□ -2.01
PRE4YFR050C RGC1Q06108 1083 aaKnown RBP2.48□□□□□ -2.01
PRE4YFR050C LEA1Q08963 238 aaPredicted RBP2.48□□□□□ -2.01
PRE4YFR050C MLH3Q12083 715 aa2.48□□□□□ -2.01
PRE4YFR050C CHS5Q12114 671 aaKnown RBP2.48□□□□□ -2.01
PRE4YFR050C MRP7P12687 371 aa2.47□□□□□ -2.01
PRE4YFR050C FRS1P15624 595 aaKnown RBP2.47□□□□□ -2.01
PRE4YFR050C GLN3P18494 730 aa2.47□□□□□ -2.01
PRE4YFR050C KGD2P19262 463 aaPredicted RBP2.47□□□□□ -2.01
PRE4YFR050C PRP22P24384 1145 aaKnown RBP2.47□□□□□ -2.01
PRE4YFR050C SWC3P31376 625 aa2.47□□□□□ -2.01
PRE4YFR050C RSM22P36056 628 aa2.47□□□□□ -2.01
PRE4YFR050C CUE2P36075 443 aaKnown RBP2.47□□□□□ -2.01
PRE4YFR050C YIL077CP40508 320 aa2.47□□□□□ -2.01
PRE4YFR050C CFD1P40558 293 aa2.47□□□□□ -2.01
PRE4YFR050C SPG5P42933 373 aa2.47□□□□□ -2.01
PRE4YFR050C YJR096WP47137 282 aa2.47□□□□□ -2.01
PRE4YFR050C SPC98P53540 846 aa2.47□□□□□ -2.01
PRE4YFR050C LGE1Q02796 332 aaKnown RBP2.47□□□□□ -2.01
PRE4YFR050C UME1Q03010 460 aa2.47□□□□□ -2.01
PRE4YFR050C YLR407WQ06070 228 aa2.47□□□□□ -2.01
PRE4YFR050C VPS36Q06696 566 aa2.47□□□□□ -2.01
PRE4YFR050C RPN8Q08723 338 aaKnown RBP2.47□□□□□ -2.01
PRE4YFR050C YLR049CQ12110 428 aa2.47□□□□□ -2.01
PRE4YFR050C RPN13O13563 156 aa2.46□□□□□ -2.02
PRE4YFR050C SEC62P21825 274 aa2.46□□□□□ -2.02
PRE4YFR050C FEN2P25621 512 aaKnown RBP2.46□□□□□ -2.02
PRE4YFR050C GMH1P36125 273 aa2.46□□□□□ -2.02
PRE4YFR050C CTP1P38152 299 aa2.46□□□□□ -2.02
PRE4YFR050C DUN1P39009 513 aa2.46□□□□□ -2.02
PRE4YFR050C ATF1P40353 525 aa2.46□□□□□ -2.02
PRE4YFR050C PHB1P40961 287 aa2.46□□□□□ -2.02
PRE4YFR050C CCT7P42943 550 aaKnown RBP2.46□□□□□ -2.02
PRE4YFR050C BIT61P47041 543 aa2.46□□□□□ -2.02
PRE4YFR050C MPS3P47069 682 aa2.46□□□□□ -2.02
PRE4YFR050C TAH11P47112 604 aa2.46□□□□□ -2.02
PRE4YFR050C RFX1P48743 811 aa2.46□□□□□ -2.02
PRE4YFR050C YGR237CP50089 785 aa2.46□□□□□ -2.02
PRE4YFR050C VEL1P53058 206 aa2.46□□□□□ -2.02
PRE4YFR050C YGR151CP53287 111 aa2.46□□□□□ -2.02
PRE4YFR050C AQR1P53943 586 aa2.46□□□□□ -2.02
PRE4YFR050C FDC1Q03034 503 aa2.46□□□□□ -2.02
PRE4YFR050C MTQ2Q03920 221 aaPredicted RBP2.46□□□□□ -2.02
PRE4YFR050C YCG1Q06680 1035 aa2.46□□□□□ -2.02
PRE4YFR050C YDL086WQ07505 273 aa2.46□□□□□ -2.02
PRE4YFR050C YDL218WQ07629 317 aa2.46□□□□□ -2.02
PRE4YFR050C SAM4Q08985 325 aaKnown RBP2.46□□□□□ -2.02
PRE4YFR050C FAP7Q12055 197 aaPredicted RBP2.46□□□□□ -2.02
PRE4YFR050C HUA2Q12134 243 aa2.46□□□□□ -2.02
PRE4YFR050C TAF3Q12297 353 aa2.46□□□□□ -2.02
PRE4YFR050C HSP42Q12329 375 aa2.46□□□□□ -2.02
PRE4YFR050C AIM44Q99299 758 aa2.46□□□□□ -2.02
PRE4YFR050C COX4P04037 155 aa2.45□□□□□ -2.02
PRE4YFR050C SEC65P29478 273 aa2.45□□□□□ -2.02
PRE4YFR050C SET3P36124 751 aa2.45□□□□□ -2.02
PRE4YFR050C APL3P38065 1025 aa2.45□□□□□ -2.02
PRE4YFR050C COS111P38308 924 aa2.45□□□□□ -2.02
PRE4YFR050C RIX1P38883 763 aaPredicted RBP2.45□□□□□ -2.02
PRE4YFR050C VPS45P38932 577 aa2.45□□□□□ -2.02
PRE4YFR050C BEM4P39011 633 aa2.45□□□□□ -2.02
PRE4YFR050C YIL161WP40449 235 aaKnown RBP2.45□□□□□ -2.02
PRE4YFR050C PXA1P41909 870 aa2.45□□□□□ -2.02
PRE4YFR050C GZF3P42944 551 aaKnown RBP2.45□□□□□ -2.02
PRE4YFR050C APM1Q00776 475 aaPredicted RBP2.45□□□□□ -2.02
PRE4YFR050C ELP3Q02908 557 aaKnown RBP2.45□□□□□ -2.02
PRE4YFR050C PPN1Q04119 674 aa2.45□□□□□ -2.02
PRE4YFR050C HFD1Q04458 532 aa2.45□□□□□ -2.02
PRE4YFR050C YSH1Q06224 779 aaPredicted RBP2.45□□□□□ -2.02
PRE4YFR050C YTM1Q12024 460 aaPredicted RBP2.45□□□□□ -2.02
PRE4YFR050C NAG1Q8TGN9 163 aa2.45□□□□□ -2.02
PRE4YFR050C RPS17AP02407 136 aaKnown RBP2.44□□□□□ -2.02
PRE4YFR050C TUB1P09733 447 aaKnown RBP2.44□□□□□ -2.02
PRE4YFR050C RPS17BP14127 136 aaKnown RBP2.44□□□□□ -2.02
PRE4YFR050C REC107P21651 314 aa2.44□□□□□ -2.02
PRE4YFR050C RPA135P22138 1203 aaKnown RBP2.44□□□□□ -2.02
PRE4YFR050C ILV6P25605 309 aaKnown RBP2.44□□□□□ -2.02
PRE4YFR050C BRN1P38170 754 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 34.4 ms