RNA–Protein interactions for RNA: YFR001W

LOC1, Nuclear protein involved in asymmetric localization of ASH1 mRNA, yeastyeast

Gene LOC1, Length 615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LOC1YFR001W UME6P39001 836 aa3.56□□□□□ -1.84
LOC1YFR001W SWP82P43554 623 aa3.56□□□□□ -1.84
LOC1YFR001W YPT11P48559 417 aa3.56□□□□□ -1.84
LOC1YFR001W VID22Q05934 901 aa3.56□□□□□ -1.84
LOC1YFR001W YLR455WQ06188 304 aa3.56□□□□□ -1.84
LOC1YFR001W CIR2Q08822 631 aa3.56□□□□□ -1.84
LOC1YFR001W FRE3Q08905 711 aa3.56□□□□□ -1.84
LOC1YFR001W ERG27Q12452 347 aaKnown RBP3.56□□□□□ -1.84
LOC1YFR001W PET111P08468 800 aa3.55□□□□□ -1.84
LOC1YFR001W ERG8P24521 451 aa3.55□□□□□ -1.84
LOC1YFR001W TFC3P34111 1160 aa3.55□□□□□ -1.84
LOC1YFR001W LHS1P36016 881 aa3.55□□□□□ -1.84
LOC1YFR001W NTR2P36118 322 aaPredicted RBP3.55□□□□□ -1.84
LOC1YFR001W AAP1P37898 856 aaKnown RBP3.55□□□□□ -1.84
LOC1YFR001W SCO2P38072 301 aa3.55□□□□□ -1.84
LOC1YFR001W SEC31P38968 1273 aaKnown RBP3.55□□□□□ -1.84
LOC1YFR001W UBP8P50102 471 aa3.55□□□□□ -1.84
LOC1YFR001W YNL144CP53907 740 aa3.55□□□□□ -1.84
LOC1YFR001W REG1Q00816 1014 aa3.55□□□□□ -1.84
LOC1YFR001W YLR049CQ12110 428 aa3.55□□□□□ -1.84
LOC1YFR001W VCX1Q99385 411 aa3.55□□□□□ -1.84
LOC1YFR001W CHO1P08456 276 aa3.54□□□□□ -1.84
LOC1YFR001W SOF1P33750 489 aaKnown RBP3.54□□□□□ -1.84
LOC1YFR001W PXL1P36166 706 aa3.54□□□□□ -1.84
LOC1YFR001W GND1P38720 489 aaKnown RBP3.54□□□□□ -1.84
LOC1YFR001W PSD1P39006 500 aa3.54□□□□□ -1.84
LOC1YFR001W MRX1P40050 688 aa3.54□□□□□ -1.84
LOC1YFR001W MDV1P47025 714 aa3.54□□□□□ -1.84
LOC1YFR001W IRC8P47046 822 aa3.54□□□□□ -1.84
LOC1YFR001W YGL036WP53185 909 aaPredicted RBP3.54□□□□□ -1.84
LOC1YFR001W YNR061CP53747 219 aa3.54□□□□□ -1.84
LOC1YFR001W RSM28Q03430 361 aa3.54□□□□□ -1.84
LOC1YFR001W SWF1Q04629 336 aa3.54□□□□□ -1.84
LOC1YFR001W TRX2P22803 104 aaKnown RBP3.53□□□□□ -1.84
LOC1YFR001W CNS1P33313 385 aa3.53□□□□□ -1.84
LOC1YFR001W SLC1P33333 303 aa3.53□□□□□ -1.84
LOC1YFR001W RIC1P40395 1056 aa3.53□□□□□ -1.84
LOC1YFR001W PFK26P40433 827 aaKnown RBP3.53□□□□□ -1.84
LOC1YFR001W YIR016WP40572 265 aa3.53□□□□□ -1.84
LOC1YFR001W RPN11P43588 306 aaKnown RBP3.53□□□□□ -1.84
LOC1YFR001W CTK2P46962 323 aa3.53□□□□□ -1.84
LOC1YFR001W IML2P47031 731 aa3.53□□□□□ -1.84
LOC1YFR001W LYS20P48570 428 aaKnown RBP3.53□□□□□ -1.84
LOC1YFR001W VPS4P52917 437 aa3.53□□□□□ -1.84
LOC1YFR001W PFA5Q03289 374 aa3.53□□□□□ -1.84
LOC1YFR001W CAC2Q04199 468 aa3.53□□□□□ -1.84
LOC1YFR001W GSH2Q08220 491 aa3.53□□□□□ -1.84
LOC1YFR001W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
LOC1YFR001W UBX3Q12229 455 aa3.53□□□□□ -1.84
LOC1YFR001W YLR302CO13544 120 aa3.52□□□□□ -1.85
LOC1YFR001W GUK1P15454 187 aaKnown RBP3.52□□□□□ -1.85
LOC1YFR001W STE50P25344 346 aa3.52□□□□□ -1.85
LOC1YFR001W AXL2P38928 823 aa3.52□□□□□ -1.85
LOC1YFR001W ECM10P39987 644 aa3.52□□□□□ -1.85
LOC1YFR001W VPS25P47142 202 aa3.52□□□□□ -1.85
LOC1YFR001W ASI1P54074 624 aa3.52□□□□□ -1.85
LOC1YFR001W YML131WQ03102 365 aa3.52□□□□□ -1.85
LOC1YFR001W FCP1Q03254 732 aa3.52□□□□□ -1.85
LOC1YFR001W ECM16Q04217 1267 aaKnown RBP3.52□□□□□ -1.85
LOC1YFR001W POS5Q06892 414 aa3.52□□□□□ -1.85
LOC1YFR001W PSK2Q08217 1101 aa3.52□□□□□ -1.85
LOC1YFR001W NUS1Q12063 375 aa3.52□□□□□ -1.85
LOC1YFR001W YLR112WQ12130 139 aa3.52□□□□□ -1.85
LOC1YFR001W TKL1P23254 680 aaKnown RBP3.51□□□□□ -1.85
LOC1YFR001W CDC15P27636 974 aa3.51□□□□□ -1.85
LOC1YFR001W RRN3P36070 627 aa3.51□□□□□ -1.85
LOC1YFR001W YER010CP40011 234 aa3.51□□□□□ -1.85
LOC1YFR001W KAP123P40069 1113 aaKnown RBP3.51□□□□□ -1.85
LOC1YFR001W YIL152WP40455 235 aa3.51□□□□□ -1.85
LOC1YFR001W BOP3P53958 396 aa3.51□□□□□ -1.85
LOC1YFR001W RCO1Q04779 684 aa3.51□□□□□ -1.85
LOC1YFR001W GPN2Q08726 347 aaPredicted RBP3.51□□□□□ -1.85
LOC1YFR001W YOL087CQ99247 1116 aa3.51□□□□□ -1.85
LOC1YFR001W YOR019WQ99248 730 aa3.51□□□□□ -1.85
LOC1YFR001W RPB2P08518 1224 aaKnown RBP3.5□□□□□ -1.85
LOC1YFR001W RPL42AP0CX27 106 aaKnown RBP3.5□□□□□ -1.85
LOC1YFR001W RPL42BP0CX28 106 aaKnown RBP3.5□□□□□ -1.85
LOC1YFR001W SAC1P32368 623 aaKnown RBP3.5□□□□□ -1.85
LOC1YFR001W ATO2P32907 282 aa3.5□□□□□ -1.85
LOC1YFR001W SNO4Q04902 237 aa3.5□□□□□ -1.85
LOC1YFR001W SNA4Q07549 140 aa3.5□□□□□ -1.85
LOC1YFR001W HSP33Q08914 237 aaKnown RBP3.5□□□□□ -1.85
LOC1YFR001W HSP32Q08992 237 aa3.5□□□□□ -1.85
LOC1YFR001W MRP20P32387 263 aa3.49□□□□□ -1.85
LOC1YFR001W CBF2P32504 956 aa3.49□□□□□ -1.85
LOC1YFR001W LEU5P38702 357 aa3.49□□□□□ -1.85
LOC1YFR001W IME4P41833 600 aa3.49□□□□□ -1.85
LOC1YFR001W YFR020WP43600 232 aa3.49□□□□□ -1.85
LOC1YFR001W IST1P53843 298 aaPredicted RBP3.49□□□□□ -1.85
LOC1YFR001W MUB1Q03162 620 aa3.49□□□□□ -1.85
LOC1YFR001W SSP2Q08646 371 aa3.49□□□□□ -1.85
LOC1YFR001W SRL1Q08673 210 aa3.49□□□□□ -1.85
LOC1YFR001W NEW1Q08972 1196 aaKnown RBP3.49□□□□□ -1.85
LOC1YFR001W YBR085C-AO43137 85 aa3.48□□□□□ -1.85
LOC1YFR001W YFL068WP0CX99 160 aa3.48□□□□□ -1.85
LOC1YFR001W YLL066W-AP0CY00 160 aa3.48□□□□□ -1.85
LOC1YFR001W YLL067W-AP0CY01 160 aa3.48□□□□□ -1.85
LOC1YFR001W RAP1P11938 827 aa3.48□□□□□ -1.85
LOC1YFR001W ESL2P36168 1195 aa3.48□□□□□ -1.85
LOC1YFR001W FMP10P40098 244 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms