RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W COX1P00401 534 aa5.07□□□□□ -1.6
DEG1YFL001W BPT1P14772 1559 aa5.07□□□□□ -1.6
DEG1YFL001W OPI1P21957 404 aa5.07□□□□□ -1.6
DEG1YFL001W YSP3P25036 478 aa5.07□□□□□ -1.6
DEG1YFL001W POL4P25615 582 aa5.07□□□□□ -1.6
DEG1YFL001W PMI40P29952 429 aaKnown RBP5.07□□□□□ -1.6
DEG1YFL001W KES1P35844 434 aaKnown RBP5.07□□□□□ -1.6
DEG1YFL001W SRO77P38163 1010 aa5.07□□□□□ -1.6
DEG1YFL001W YNG2P38806 282 aaKnown RBP5.07□□□□□ -1.6
DEG1YFL001W YEL057CP39983 233 aa5.07□□□□□ -1.6
DEG1YFL001W MET18P40469 1032 aa5.07□□□□□ -1.6
DEG1YFL001W MET28P40573 187 aa5.07□□□□□ -1.6
DEG1YFL001W ROK1P45818 564 aaPredicted RBP5.07□□□□□ -1.6
DEG1YFL001W MSE1P48525 536 aa5.07□□□□□ -1.6
DEG1YFL001W LYS4P49367 693 aaPredicted RBP5.07□□□□□ -1.6
DEG1YFL001W UBP16Q02863 499 aa5.07□□□□□ -1.6
DEG1YFL001W RCF1Q03713 159 aa5.07□□□□□ -1.6
DEG1YFL001W YDR131CQ03899 556 aa5.07□□□□□ -1.6
DEG1YFL001W CRN1Q06440 651 aa5.07□□□□□ -1.6
DEG1YFL001W YEH1Q07804 573 aa5.07□□□□□ -1.6
DEG1YFL001W YPL272CQ08984 517 aa5.07□□□□□ -1.6
DEG1YFL001W SMC6Q12749 1114 aa5.07□□□□□ -1.6
DEG1YFL001W YJR112W-AQ3E743 109 aa5.07□□□□□ -1.6
DEG1YFL001W TAD3Q9URQ3 322 aa5.07□□□□□ -1.6
DEG1YFL001W AI5_ALPHAQ9ZZX1 630 aa5.07□□□□□ -1.6
DEG1YFL001W Q0010Q9ZZX9 128 aa5.07□□□□□ -1.6
DEG1YFL001W UFD4P33202 1483 aa5.07□□□□□ -1.6
DEG1YFL001W PWP1P21304 576 aaKnown RBP5.06□□□□□ -1.6
DEG1YFL001W DBF4P32325 704 aa5.06□□□□□ -1.6
DEG1YFL001W PDB1P32473 366 aaKnown RBP5.06□□□□□ -1.6
DEG1YFL001W MUM2P38236 366 aa5.06□□□□□ -1.6
DEG1YFL001W CBR1P38626 284 aaKnown RBP5.06□□□□□ -1.6
DEG1YFL001W YHL017WP38745 532 aa5.06□□□□□ -1.6
DEG1YFL001W PCL5P38794 229 aa5.06□□□□□ -1.6
DEG1YFL001W PHM8P40025 321 aa5.06□□□□□ -1.6
DEG1YFL001W SWP82P43554 623 aa5.06□□□□□ -1.6
DEG1YFL001W COQ6P53318 479 aa5.06□□□□□ -1.6
DEG1YFL001W DCP2P53550 970 aaKnown RBP5.06□□□□□ -1.6
DEG1YFL001W JJJ1P53863 590 aa5.06□□□□□ -1.6
DEG1YFL001W YAT1P80235 687 aa5.06□□□□□ -1.6
DEG1YFL001W YML037CQ03703 340 aa5.06□□□□□ -1.6
DEG1YFL001W SCC2Q04002 1493 aa5.06□□□□□ -1.6
DEG1YFL001W DFR1P07807 211 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
DEG1YFL001W WHI2P12611 486 aa5.05□□□□□ -1.6
DEG1YFL001W CDC60P26637 1090 aaKnown RBP5.05□□□□□ -1.6
DEG1YFL001W GDA1P32621 518 aa5.05□□□□□ -1.6
DEG1YFL001W ORC2P32833 620 aa5.05□□□□□ -1.6
DEG1YFL001W NTR2P36118 322 aaPredicted RBP5.05□□□□□ -1.6
DEG1YFL001W GLG1P36143 616 aa5.05□□□□□ -1.6
DEG1YFL001W AGP2P38090 596 aa5.05□□□□□ -1.6
DEG1YFL001W REG2P38232 338 aa5.05□□□□□ -1.6
DEG1YFL001W LRP1P38801 184 aaKnown RBP5.05□□□□□ -1.6
DEG1YFL001W MTG2P38860 518 aa5.05□□□□□ -1.6
DEG1YFL001W CCT6P39079 546 aa5.05□□□□□ -1.6
DEG1YFL001W UBX6P47049 396 aa5.05□□□□□ -1.6
DEG1YFL001W YGR066CP53242 292 aa5.05□□□□□ -1.6
DEG1YFL001W ZDS2P54786 942 aa5.05□□□□□ -1.6
DEG1YFL001W YPL191CQ08930 360 aa5.05□□□□□ -1.6
DEG1YFL001W YPT6Q99260 215 aa5.05□□□□□ -1.6
DEG1YFL001W RPO31P04051 1460 aa5.05□□□□□ -1.6
DEG1YFL001W CPA2P03965 1118 aaKnown RBP5.04□□□□□ -1.6
DEG1YFL001W SRP54P20424 541 aaKnown RBP5.04□□□□□ -1.6
DEG1YFL001W RNR3P21672 869 aaKnown RBP5.04□□□□□ -1.6
DEG1YFL001W LAC1P28496 418 aa5.04□□□□□ -1.6
DEG1YFL001W AAP1P37898 856 aaKnown RBP5.04□□□□□ -1.6
DEG1YFL001W APE4P38821 490 aa5.04□□□□□ -1.6
DEG1YFL001W SMF1P38925 575 aa5.04□□□□□ -1.6
DEG1YFL001W BDH2P39713 417 aa5.04□□□□□ -1.6
DEG1YFL001W STR3P53101 465 aaKnown RBP5.04□□□□□ -1.6
DEG1YFL001W LCL3P53153 274 aa5.04□□□□□ -1.6
DEG1YFL001W COG2P53271 262 aa5.04□□□□□ -1.6
DEG1YFL001W YDR109CQ04585 715 aa5.04□□□□□ -1.6
DEG1YFL001W GFD1Q04839 188 aaKnown RBP5.04□□□□□ -1.6
DEG1YFL001W YML053CQ04978 212 aa5.04□□□□□ -1.6
DEG1YFL001W SWA2Q06677 668 aa5.04□□□□□ -1.6
DEG1YFL001W PSR1Q07800 427 aa5.04□□□□□ -1.6
DEG1YFL001W ZPS1Q12512 249 aa5.04□□□□□ -1.6
DEG1YFL001W PCT1P13259 424 aa5.03□□□□□ -1.6
DEG1YFL001W YIH1P25637 258 aa5.03□□□□□ -1.6
DEG1YFL001W UBP11P36026 717 aa5.03□□□□□ -1.6
DEG1YFL001W VBA2P38358 474 aaKnown RBP5.03□□□□□ -1.6
DEG1YFL001W SEC31P38968 1273 aaKnown RBP5.03□□□□□ -1.6
DEG1YFL001W MIT1P40002 666 aa5.03□□□□□ -1.6
DEG1YFL001W YJL068CP40363 299 aa5.03□□□□□ -1.6
DEG1YFL001W RPN11P43588 306 aaKnown RBP5.03□□□□□ -1.6
DEG1YFL001W ADE16P54113 591 aaKnown RBP5.03□□□□□ -1.6
DEG1YFL001W KIN4Q01919 800 aa5.03□□□□□ -1.6
DEG1YFL001W PCL8Q08966 492 aa5.03□□□□□ -1.6
DEG1YFL001W YOL159C-AQ3E769 90 aa5.03□□□□□ -1.6
DEG1YFL001W POL1P13382 1468 aa5.02□□□□□ -1.61
DEG1YFL001W ECM32P32644 1121 aaKnown RBP5.02□□□□□ -1.61
DEG1YFL001W YMC2P38087 329 aa5.02□□□□□ -1.61
DEG1YFL001W VID24P38263 362 aa5.02□□□□□ -1.61
DEG1YFL001W CCT7P42943 550 aaKnown RBP5.02□□□□□ -1.61
DEG1YFL001W CTK2P46962 323 aa5.02□□□□□ -1.61
DEG1YFL001W CPR8P53728 308 aa5.02□□□□□ -1.61
DEG1YFL001W ERO1Q03103 563 aa5.02□□□□□ -1.61
DEG1YFL001W RAD33Q04231 177 aa5.02□□□□□ -1.61
DEG1YFL001W BUD22Q04347 519 aaKnown RBP5.02□□□□□ -1.61
DEG1YFL001W ECM22Q05958 814 aaPredicted RBP5.02□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 65.7 ms