RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W RPL24AP04449 155 aaKnown RBP5.34□□□□□ -1.56
UBP9YER098W HMG2P12684 1045 aa5.34□□□□□ -1.56
UBP9YER098W CHS2P14180 963 aa5.34□□□□□ -1.56
UBP9YER098W PRE4P30657 266 aa5.34□□□□□ -1.56
UBP9YER098W YBR225WP38321 900 aa5.34□□□□□ -1.56
UBP9YER098W MSS4P38994 779 aa5.34□□□□□ -1.56
UBP9YER098W SYG1P40528 902 aa5.34□□□□□ -1.56
UBP9YER098W PRY1P47032 299 aa5.34□□□□□ -1.56
UBP9YER098W BTN2P53286 410 aa5.34□□□□□ -1.56
UBP9YER098W ARE2P53629 642 aaKnown RBP5.34□□□□□ -1.56
UBP9YER098W ERO1Q03103 563 aa5.34□□□□□ -1.56
UBP9YER098W VTI1Q04338 217 aa5.34□□□□□ -1.56
UBP9YER098W CRD1Q07560 283 aa5.34□□□□□ -1.56
UBP9YER098W COX17Q12287 69 aa5.34□□□□□ -1.56
UBP9YER098W SED4P25365 1065 aa5.33□□□□□ -1.56
UBP9YER098W SGF29P25554 259 aa5.33□□□□□ -1.56
UBP9YER098W ADY2P25613 283 aa5.33□□□□□ -1.56
UBP9YER098W NOP4P37838 685 aaKnown RBP5.33□□□□□ -1.56
UBP9YER098W OSH3P38713 996 aaKnown RBP5.33□□□□□ -1.56
UBP9YER098W ETP1P38748 585 aaKnown RBP5.33□□□□□ -1.56
UBP9YER098W IMA1P53051 589 aa5.33□□□□□ -1.56
UBP9YER098W BSC5P53755 489 aa5.33□□□□□ -1.56
UBP9YER098W YML119WQ03208 357 aa5.33□□□□□ -1.56
UBP9YER098W PPM1Q04081 328 aa5.33□□□□□ -1.56
UBP9YER098W PPN1Q04119 674 aa5.33□□□□□ -1.56
UBP9YER098W UPC2Q12151 913 aa5.33□□□□□ -1.56
UBP9YER098W CKI1P20485 582 aa5.32□□□□□ -1.56
UBP9YER098W ARP2P32381 391 aaKnown RBP5.32□□□□□ -1.56
UBP9YER098W APE4P38821 490 aa5.32□□□□□ -1.56
UBP9YER098W CCT3P39077 534 aaKnown RBP5.32□□□□□ -1.56
UBP9YER098W CAB2P40506 365 aa5.32□□□□□ -1.56
UBP9YER098W YNL320WP42840 284 aa5.32□□□□□ -1.56
UBP9YER098W RMD8P43620 662 aa5.32□□□□□ -1.56
UBP9YER098W BIT61P47041 543 aa5.32□□□□□ -1.56
UBP9YER098W TAH11P47112 604 aa5.32□□□□□ -1.56
UBP9YER098W MEH1Q02205 184 aa5.32□□□□□ -1.56
UBP9YER098W REC102Q02721 264 aa5.32□□□□□ -1.56
UBP9YER098W FMP30Q02883 468 aa5.32□□□□□ -1.56
UBP9YER098W EBS1Q03466 884 aaKnown RBP5.32□□□□□ -1.56
UBP9YER098W UTP21Q06078 939 aaPredicted RBP5.32□□□□□ -1.56
UBP9YER098W VAM6Q07468 1049 aa5.32□□□□□ -1.56
UBP9YER098W NSE1Q07913 336 aa5.32□□□□□ -1.56
UBP9YER098W YDL176WQ12027 708 aa5.32□□□□□ -1.56
UBP9YER098W TAF10Q12030 206 aa5.32□□□□□ -1.56
UBP9YER098W SGT2Q12118 346 aaKnown RBP5.32□□□□□ -1.56
UBP9YER098W IES3Q12345 250 aa5.32□□□□□ -1.56
UBP9YER098W GAL10P04397 699 aa5.32□□□□□ -1.56
UBP9YER098W TPK1P06244 397 aa5.32□□□□□ -1.56
UBP9YER098W ERG20P08524 352 aaKnown RBP5.32□□□□□ -1.56
UBP9YER098W YCR051WP25631 222 aa5.32□□□□□ -1.56
UBP9YER098W PEP3P27801 918 aa5.32□□□□□ -1.56
UBP9YER098W SIN4P32259 974 aa5.32□□□□□ -1.56
UBP9YER098W STE14P32584 239 aa5.32□□□□□ -1.56
UBP9YER098W YPT7P32939 208 aa5.32□□□□□ -1.56
UBP9YER098W RPC25P35718 212 aa5.32□□□□□ -1.56
UBP9YER098W YHR112CP38716 378 aa5.32□□□□□ -1.56
UBP9YER098W TDA10P42938 290 aa5.32□□□□□ -1.56
UBP9YER098W GSM1P42950 618 aa5.32□□□□□ -1.56
UBP9YER098W PKH1Q03407 766 aa5.32□□□□□ -1.56
UBP9YER098W MCM21Q06675 368 aa5.32□□□□□ -1.56
UBP9YER098W CYC1P00044 109 aaPredicted RBP5.31□□□□□ -1.56
UBP9YER098W VMA2P16140 517 aaKnown RBP5.31□□□□□ -1.56
UBP9YER098W EFB1P32471 206 aaKnown RBP5.31□□□□□ -1.56
UBP9YER098W FSH1P38777 243 aaKnown RBP5.31□□□□□ -1.56
UBP9YER098W POL31P46957 487 aa5.31□□□□□ -1.56
UBP9YER098W URB2P47108 1174 aa5.31□□□□□ -1.56
UBP9YER098W IMD4P50094 524 aaKnown RBP5.31□□□□□ -1.56
UBP9YER098W HMO1Q03973 246 aaKnown RBP5.31□□□□□ -1.56
UBP9YER098W MRD1Q06106 887 aaKnown RBP5.31□□□□□ -1.56
UBP9YER098W GPB1Q08886 897 aa5.31□□□□□ -1.56
UBP9YER098W ICL2Q12031 575 aa5.31□□□□□ -1.56
UBP9YER098W MSH5Q12175 901 aa5.31□□□□□ -1.56
UBP9YER098W ECM3Q99252 613 aa5.31□□□□□ -1.56
UBP9YER098W TUB3P09734 445 aaKnown RBP5.31□□□□□ -1.56
UBP9YER098W RED1P14291 827 aa5.31□□□□□ -1.56
UBP9YER098W THR4P16120 514 aaKnown RBP5.31□□□□□ -1.56
UBP9YER098W OLE1P21147 510 aaKnown RBP5.31□□□□□ -1.56
UBP9YER098W RNR1P21524 888 aaKnown RBP5.31□□□□□ -1.56
UBP9YER098W SPO11P23179 398 aa5.31□□□□□ -1.56
UBP9YER098W MAC1P35192 417 aa5.31□□□□□ -1.56
UBP9YER098W MTH1P35198 433 aa5.31□□□□□ -1.56
UBP9YER098W MUM2P38236 366 aa5.31□□□□□ -1.56
UBP9YER098W NPR2P39923 615 aa5.31□□□□□ -1.56
UBP9YER098W PDS1P40316 373 aaPredicted RBP5.31□□□□□ -1.56
UBP9YER098W URM1P40554 99 aaPredicted RBP5.31□□□□□ -1.56
UBP9YER098W RPT6Q01939 405 aaKnown RBP5.31□□□□□ -1.56
UBP9YER098W YPL071CQ02864 156 aa5.31□□□□□ -1.56
UBP9YER098W RCF1Q03713 159 aa5.31□□□□□ -1.56
UBP9YER098W ATG26Q06321 1198 aa5.31□□□□□ -1.56
UBP9YER098W TPO1Q07824 586 aa5.31□□□□□ -1.56
UBP9YER098W GPN2Q08726 347 aaPredicted RBP5.31□□□□□ -1.56
UBP9YER098W SKM1Q12469 655 aa5.31□□□□□ -1.56
UBP9YER098W UTP10P42945 1769 aaKnown RBP5.3□□□□□ -1.56
UBP9YER098W YLR415CO13578 112 aa5.3□□□□□ -1.56
UBP9YER098W RPS9BP05755 195 aaKnown RBP5.3□□□□□ -1.56
UBP9YER098W PPR1P07272 904 aaPredicted RBP5.3□□□□□ -1.56
UBP9YER098W PET122P10355 254 aa5.3□□□□□ -1.56
UBP9YER098W FAR1P21268 830 aa5.3□□□□□ -1.56
UBP9YER098W APT2P36973 181 aa5.3□□□□□ -1.56
UBP9YER098W CDS1P38221 457 aa5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms