RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C CDC24P11433 854 aaPredicted RBP3.49□□□□□ -1.85
VAB2YEL005C MBR1P23493 339 aa3.49□□□□□ -1.85
VAB2YEL005C NTR2P36118 322 aaPredicted RBP3.49□□□□□ -1.85
VAB2YEL005C AAP1P37898 856 aaKnown RBP3.49□□□□□ -1.85
VAB2YEL005C YBL029WP38201 376 aa3.49□□□□□ -1.85
VAB2YEL005C SEC31P38968 1273 aaKnown RBP3.49□□□□□ -1.85
VAB2YEL005C NAB3P38996 802 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
VAB2YEL005C MNT3P40549 630 aa3.49□□□□□ -1.85
VAB2YEL005C IME4P41833 600 aa3.49□□□□□ -1.85
VAB2YEL005C UBP8P50102 471 aa3.49□□□□□ -1.85
VAB2YEL005C IST1P53843 298 aaPredicted RBP3.49□□□□□ -1.85
VAB2YEL005C MUB1Q03162 620 aa3.49□□□□□ -1.85
VAB2YEL005C PFA5Q03289 374 aa3.49□□□□□ -1.85
VAB2YEL005C VPS72Q03388 795 aa3.49□□□□□ -1.85
VAB2YEL005C PDR8Q06149 701 aa3.49□□□□□ -1.85
VAB2YEL005C SKG3Q06315 1026 aa3.49□□□□□ -1.85
VAB2YEL005C MCH4Q08268 501 aa3.49□□□□□ -1.85
VAB2YEL005C HUA2Q12134 243 aa3.49□□□□□ -1.85
VAB2YEL005C YOR019WQ99248 730 aa3.49□□□□□ -1.85
VAB2YEL005C RPB2P08518 1224 aaKnown RBP3.48□□□□□ -1.85
VAB2YEL005C RAP1P11938 827 aa3.48□□□□□ -1.85
VAB2YEL005C SPE2P21182 396 aa3.48□□□□□ -1.85
VAB2YEL005C MAK32P23060 363 aa3.48□□□□□ -1.85
VAB2YEL005C CBF2P32504 956 aa3.48□□□□□ -1.85
VAB2YEL005C OCT1P35999 772 aa3.48□□□□□ -1.85
VAB2YEL005C ALY1P36117 915 aa3.48□□□□□ -1.85
VAB2YEL005C ESL2P36168 1195 aa3.48□□□□□ -1.85
VAB2YEL005C ADE17P38009 592 aaKnown RBP3.48□□□□□ -1.85
VAB2YEL005C YEL068CP39977 110 aa3.48□□□□□ -1.85
VAB2YEL005C JHD1P40034 492 aa3.48□□□□□ -1.85
VAB2YEL005C NET1P47035 1189 aa3.48□□□□□ -1.85
VAB2YEL005C NNF2P53253 936 aa3.48□□□□□ -1.85
VAB2YEL005C MEP3P53390 489 aa3.48□□□□□ -1.85
VAB2YEL005C YPR003CP53394 754 aa3.48□□□□□ -1.85
VAB2YEL005C RSC9Q03124 581 aa3.48□□□□□ -1.85
VAB2YEL005C RSM28Q03430 361 aa3.48□□□□□ -1.85
VAB2YEL005C PSK2Q08217 1101 aa3.48□□□□□ -1.85
VAB2YEL005C TCO89Q08921 799 aa3.48□□□□□ -1.85
VAB2YEL005C GET3Q12154 354 aaKnown RBP3.48□□□□□ -1.85
VAB2YEL005C FRE7Q12333 620 aa3.48□□□□□ -1.85
VAB2YEL005C YMR085WP0CF18 432 aa3.47□□□□□ -1.85
VAB2YEL005C PCT1P13259 424 aa3.47□□□□□ -1.85
VAB2YEL005C YAP1P19880 650 aaKnown RBP3.47□□□□□ -1.85
VAB2YEL005C UBP13P38187 747 aa3.47□□□□□ -1.85
VAB2YEL005C ARN1P38731 627 aa3.47□□□□□ -1.85
VAB2YEL005C ERV46P39727 415 aa3.47□□□□□ -1.85
VAB2YEL005C AFG3P39925 761 aa3.47□□□□□ -1.85
VAB2YEL005C ECM10P39987 644 aa3.47□□□□□ -1.85
VAB2YEL005C SLZ1P40167 298 aa3.47□□□□□ -1.85
VAB2YEL005C LYS14P40971 790 aa3.47□□□□□ -1.85
VAB2YEL005C ARC1P46672 376 aaKnown RBP3.47□□□□□ -1.85
VAB2YEL005C VPS25P47142 202 aa3.47□□□□□ -1.85
VAB2YEL005C STP1Q00947 519 aa3.47□□□□□ -1.85
VAB2YEL005C PSR1Q07800 427 aa3.47□□□□□ -1.85
VAB2YEL005C PFA4Q12006 378 aa3.47□□□□□ -1.85
VAB2YEL005C CRC1Q12289 327 aa3.47□□□□□ -1.85
VAB2YEL005C YOL087CQ99247 1116 aa3.47□□□□□ -1.85
VAB2YEL005C VMA16P23968 213 aa3.46□□□□□ -1.86
VAB2YEL005C YSP3P25036 478 aa3.46□□□□□ -1.86
VAB2YEL005C AGP2P38090 596 aa3.46□□□□□ -1.86
VAB2YEL005C RTS1P38903 757 aa3.46□□□□□ -1.86
VAB2YEL005C PSD1P39006 500 aa3.46□□□□□ -1.86
VAB2YEL005C VRG4P40107 337 aa3.46□□□□□ -1.86
VAB2YEL005C DPH1P40487 425 aaKnown RBP3.46□□□□□ -1.86
VAB2YEL005C YIL024CP40543 189 aa3.46□□□□□ -1.86
VAB2YEL005C YJL107CP42947 387 aa3.46□□□□□ -1.86
VAB2YEL005C SWP82P43554 623 aa3.46□□□□□ -1.86
VAB2YEL005C STB2P46679 850 aa3.46□□□□□ -1.86
VAB2YEL005C CTK2P46962 323 aa3.46□□□□□ -1.86
VAB2YEL005C AAD10P47182 288 aa3.46□□□□□ -1.86
VAB2YEL005C TDA9Q04545 1251 aa3.46□□□□□ -1.86
VAB2YEL005C TMA64Q04600 565 aaKnown RBP3.46□□□□□ -1.86
VAB2YEL005C ECM22Q05958 814 aaPredicted RBP3.46□□□□□ -1.86
VAB2YEL005C ENT4Q07872 247 aa3.46□□□□□ -1.86
VAB2YEL005C RRI1Q12468 440 aa3.46□□□□□ -1.86
VAB2YEL005C CDC16P09798 840 aa3.45□□□□□ -1.86
VAB2YEL005C MUD2P36084 527 aaKnown RBP3.45□□□□□ -1.86
VAB2YEL005C GEX2P36173 615 aa3.45□□□□□ -1.86
VAB2YEL005C STV1P37296 890 aa3.45□□□□□ -1.86
VAB2YEL005C BUR6P40096 142 aa3.45□□□□□ -1.86
VAB2YEL005C SEC24P40482 926 aaKnown RBP3.45□□□□□ -1.86
VAB2YEL005C DPB11P47027 764 aaPredicted RBP3.45□□□□□ -1.86
VAB2YEL005C BNA3P47039 444 aaKnown RBP3.45□□□□□ -1.86
VAB2YEL005C COP1P53622 1201 aaKnown RBP3.45□□□□□ -1.86
VAB2YEL005C ZDS2P54786 942 aa3.45□□□□□ -1.86
VAB2YEL005C VTC3Q02725 835 aa3.45□□□□□ -1.86
VAB2YEL005C RAD30Q04049 632 aa3.45□□□□□ -1.86
VAB2YEL005C SWF1Q04629 336 aa3.45□□□□□ -1.86
VAB2YEL005C YLR455WQ06188 304 aa3.45□□□□□ -1.86
VAB2YEL005C APL4Q12028 832 aa3.45□□□□□ -1.86
VAB2YEL005C SRP54P20424 541 aaKnown RBP3.44□□□□□ -1.86
VAB2YEL005C PAH1P32567 862 aa3.44□□□□□ -1.86
VAB2YEL005C YKL050CP35736 922 aa3.44□□□□□ -1.86
VAB2YEL005C FLO5P38894 1075 aa3.44□□□□□ -1.86
VAB2YEL005C TPA1P40032 644 aaKnown RBP3.44□□□□□ -1.86
VAB2YEL005C PKP1P40530 394 aa3.44□□□□□ -1.86
VAB2YEL005C CFD1P40558 293 aa3.44□□□□□ -1.86
VAB2YEL005C YFR020WP43600 232 aa3.44□□□□□ -1.86
VAB2YEL005C SMC3P47037 1230 aa3.44□□□□□ -1.86
VAB2YEL005C MRPL1Q04599 285 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 99.9 ms