RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C PCT1P13259 424 aa4.31□□□□□ -1.72
SHU2YDR078C SRP54P20424 541 aaKnown RBP4.31□□□□□ -1.72
SHU2YDR078C EMP70P32802 667 aa4.31□□□□□ -1.72
SHU2YDR078C MTH1P35198 433 aa4.31□□□□□ -1.72
SHU2YDR078C KES1P35844 434 aaKnown RBP4.31□□□□□ -1.72
SHU2YDR078C NTR2P36118 322 aaPredicted RBP4.31□□□□□ -1.72
SHU2YDR078C AAP1P37898 856 aaKnown RBP4.31□□□□□ -1.72
SHU2YDR078C UTP9P38882 575 aaKnown RBP4.31□□□□□ -1.72
SHU2YDR078C TPA1P40032 644 aaKnown RBP4.31□□□□□ -1.72
SHU2YDR078C SNM1P40993 198 aa4.31□□□□□ -1.72
SHU2YDR078C VPS73P53142 486 aaKnown RBP4.31□□□□□ -1.72
SHU2YDR078C YGL036WP53185 909 aaPredicted RBP4.31□□□□□ -1.72
SHU2YDR078C ARP9Q05123 467 aa4.31□□□□□ -1.72
SHU2YDR078C LYS21Q12122 440 aaKnown RBP4.31□□□□□ -1.72
SHU2YDR078C HSH49Q99181 213 aaPredicted RBP4.31□□□□□ -1.72
SHU2YDR078C ARG3P05150 338 aa4.3□□□□□ -1.72
SHU2YDR078C SAT4P25333 603 aaKnown RBP4.3□□□□□ -1.72
SHU2YDR078C OCA4P25366 362 aa4.3□□□□□ -1.72
SHU2YDR078C NPL6P32832 435 aa4.3□□□□□ -1.72
SHU2YDR078C UGP1P32861 499 aaKnown RBP4.3□□□□□ -1.72
SHU2YDR078C MAL33P38157 468 aa4.3□□□□□ -1.72
SHU2YDR078C RKM3P38222 552 aa4.3□□□□□ -1.72
SHU2YDR078C YNG2P38806 282 aaKnown RBP4.3□□□□□ -1.72
SHU2YDR078C SEC31P38968 1273 aaKnown RBP4.3□□□□□ -1.72
SHU2YDR078C TCO89Q08921 799 aa4.3□□□□□ -1.72
SHU2YDR078C SEC3P33332 1336 aaKnown RBP4.29□□□□□ -1.72
SHU2YDR078C CBS1P14066 229 aa4.29□□□□□ -1.72
SHU2YDR078C CKA1P15790 372 aa4.29□□□□□ -1.72
SHU2YDR078C FUR1P18562 216 aaKnown RBP4.29□□□□□ -1.72
SHU2YDR078C AAD3P25612 363 aa4.29□□□□□ -1.72
SHU2YDR078C PDB1P32473 366 aaKnown RBP4.29□□□□□ -1.72
SHU2YDR078C AUR1P36107 401 aaPredicted RBP4.29□□□□□ -1.72
SHU2YDR078C YEL020CP39994 560 aa4.29□□□□□ -1.72
SHU2YDR078C ASG1P40467 964 aa4.29□□□□□ -1.72
SHU2YDR078C CIR1P42940 261 aa4.29□□□□□ -1.72
SHU2YDR078C RPN11P43588 306 aaKnown RBP4.29□□□□□ -1.72
SHU2YDR078C GLO1P50107 326 aa4.29□□□□□ -1.72
SHU2YDR078C RPT6Q01939 405 aaKnown RBP4.29□□□□□ -1.72
SHU2YDR078C LGE1Q02796 332 aaKnown RBP4.29□□□□□ -1.72
SHU2YDR078C SYF1Q04048 859 aaPredicted RBP4.29□□□□□ -1.72
SHU2YDR078C UTP21Q06078 939 aaPredicted RBP4.29□□□□□ -1.72
SHU2YDR078C CYK3Q07533 885 aa4.29□□□□□ -1.72
SHU2YDR078C ULA1Q12059 462 aa4.29□□□□□ -1.72
SHU2YDR078C SPE4Q12455 300 aa4.29□□□□□ -1.72
SHU2YDR078C RPN13O13563 156 aa4.28□□□□□ -1.72
SHU2YDR078C ILV2P07342 687 aaKnown RBP4.28□□□□□ -1.72
SHU2YDR078C HEM1P09950 548 aaPredicted RBP4.28□□□□□ -1.72
SHU2YDR078C RED1P14291 827 aa4.28□□□□□ -1.72
SHU2YDR078C POL4P25615 582 aa4.28□□□□□ -1.72
SHU2YDR078C PTC6P25646 442 aa4.28□□□□□ -1.72
SHU2YDR078C PEP3P27801 918 aa4.28□□□□□ -1.72
SHU2YDR078C AGP2P38090 596 aa4.28□□□□□ -1.72
SHU2YDR078C UBP13P38187 747 aa4.28□□□□□ -1.72
SHU2YDR078C EXO1P39875 702 aa4.28□□□□□ -1.72
SHU2YDR078C MRX1P40050 688 aa4.28□□□□□ -1.72
SHU2YDR078C RGI2P40188 164 aa4.28□□□□□ -1.72
SHU2YDR078C SPO22P40511 975 aa4.28□□□□□ -1.72
SHU2YDR078C LYS4P49367 693 aaPredicted RBP4.28□□□□□ -1.72
SHU2YDR078C MRK1P50873 501 aa4.28□□□□□ -1.72
SHU2YDR078C YPL071CQ02864 156 aa4.28□□□□□ -1.72
SHU2YDR078C RSM28Q03430 361 aa4.28□□□□□ -1.72
SHU2YDR078C YML037CQ03703 340 aa4.28□□□□□ -1.72
SHU2YDR078C PSR1Q07800 427 aa4.28□□□□□ -1.72
SHU2YDR078C IRC10Q08118 586 aa4.28□□□□□ -1.72
SHU2YDR078C LEA1Q08963 238 aaPredicted RBP4.28□□□□□ -1.72
SHU2YDR078C MSL5Q12186 476 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
SHU2YDR078C RTC1Q08281 1341 aa4.27□□□□□ -1.73
SHU2YDR078C ROX1P25042 368 aa4.27□□□□□ -1.73
SHU2YDR078C YMC1P32331 307 aa4.27□□□□□ -1.73
SHU2YDR078C RPC34P32910 317 aa4.27□□□□□ -1.73
SHU2YDR078C SOF1P33750 489 aaKnown RBP4.27□□□□□ -1.73
SHU2YDR078C LHS1P36016 881 aa4.27□□□□□ -1.73
SHU2YDR078C QRI1P43123 477 aaKnown RBP4.27□□□□□ -1.73
SHU2YDR078C STR3P53101 465 aaKnown RBP4.27□□□□□ -1.73
SHU2YDR078C RAD34Q06665 692 aa4.27□□□□□ -1.73
SHU2YDR078C YEH1Q07804 573 aa4.27□□□□□ -1.73
SHU2YDR078C YPL272CQ08984 517 aa4.27□□□□□ -1.73
SHU2YDR078C RRG1Q12167 365 aaPredicted RBP4.27□□□□□ -1.73
SHU2YDR078C PGA3Q12746 312 aaKnown RBP4.27□□□□□ -1.73
SHU2YDR078C MET17P06106 444 aa4.26□□□□□ -1.73
SHU2YDR078C PWP1P21304 576 aaKnown RBP4.26□□□□□ -1.73
SHU2YDR078C LCB1P25045 558 aaKnown RBP4.26□□□□□ -1.73
SHU2YDR078C YIH1P25637 258 aa4.26□□□□□ -1.73
SHU2YDR078C GSH1P32477 678 aa4.26□□□□□ -1.73
SHU2YDR078C ADE17P38009 592 aaKnown RBP4.26□□□□□ -1.73
SHU2YDR078C DIA4P38705 446 aaPredicted RBP4.26□□□□□ -1.73
SHU2YDR078C CCT6P39079 546 aa4.26□□□□□ -1.73
SHU2YDR078C ECM10P39987 644 aa4.26□□□□□ -1.73
SHU2YDR078C LCL3P53153 274 aa4.26□□□□□ -1.73
SHU2YDR078C IST1P53843 298 aaPredicted RBP4.26□□□□□ -1.73
SHU2YDR078C SPN1Q06505 410 aaPredicted RBP4.26□□□□□ -1.73
SHU2YDR078C SFI1Q12369 946 aa4.26□□□□□ -1.73
SHU2YDR078C YJR112W-AQ3E743 109 aa4.26□□□□□ -1.73
SHU2YDR078C HXK2P04807 486 aaKnown RBP4.25□□□□□ -1.73
SHU2YDR078C ADE5,7P07244 802 aaKnown RBP4.25□□□□□ -1.73
SHU2YDR078C ARD1P07347 238 aaPredicted RBP4.25□□□□□ -1.73
SHU2YDR078C AQY1P0CD91 305 aa4.25□□□□□ -1.73
SHU2YDR078C VMA16P23968 213 aa4.25□□□□□ -1.73
SHU2YDR078C ERG3P32353 365 aa4.25□□□□□ -1.73
SHU2YDR078C SRO77P38163 1010 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms