RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C TIF3P34167 436 aaKnown RBP4.43□□□□□ -1.7
CDC9YDL164C MAL33P38157 468 aa4.43□□□□□ -1.7
CDC9YDL164C YBL028CP38202 106 aa4.43□□□□□ -1.7
CDC9YDL164C TDP1P38319 544 aa4.43□□□□□ -1.7
CDC9YDL164C ALG5P40350 334 aa4.43□□□□□ -1.7
CDC9YDL164C PXA1P41909 870 aa4.43□□□□□ -1.7
CDC9YDL164C ATG21Q02887 496 aa4.43□□□□□ -1.7
CDC9YDL164C YDR444WQ04093 687 aa4.43□□□□□ -1.7
CDC9YDL164C CUR1Q06469 252 aa4.43□□□□□ -1.7
CDC9YDL164C HRP1Q99383 534 aaKnown RBP4.43□□□□□ -1.7
CDC9YDL164C SAC3P46674 1301 aa4.43□□□□□ -1.7
CDC9YDL164C EST1P17214 699 aaPredicted RBP4.43□□□□□ -1.7
CDC9YDL164C KGD1P20967 1014 aaKnown RBP4.43□□□□□ -1.7
CDC9YDL164C FPS1P23900 669 aa4.43□□□□□ -1.7
CDC9YDL164C CAD1P24813 409 aaKnown RBP4.43□□□□□ -1.7
CDC9YDL164C DMC1P25453 334 aa4.43□□□□□ -1.7
CDC9YDL164C YER034WP40022 185 aaKnown RBP4.43□□□□□ -1.7
CDC9YDL164C MAF1P41910 395 aa4.43□□□□□ -1.7
CDC9YDL164C ELP2P42935 788 aa4.43□□□□□ -1.7
CDC9YDL164C SCW11P53189 542 aa4.43□□□□□ -1.7
CDC9YDL164C YNL143CP53908 130 aa4.43□□□□□ -1.7
CDC9YDL164C KTR5P53966 522 aaPredicted RBP4.43□□□□□ -1.7
CDC9YDL164C ATG29Q12092 213 aa4.43□□□□□ -1.7
CDC9YDL164C NBP2Q12163 236 aa4.43□□□□□ -1.7
CDC9YDL164C DFR1P07807 211 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
CDC9YDL164C YML002WP0CF17 737 aa4.42□□□□□ -1.7
CDC9YDL164C MSS1P32559 526 aaPredicted RBP4.42□□□□□ -1.7
CDC9YDL164C SSE1P32589 693 aaKnown RBP4.42□□□□□ -1.7
CDC9YDL164C YUH1P35127 236 aa4.42□□□□□ -1.7
CDC9YDL164C DED81P38707 554 aaKnown RBP4.42□□□□□ -1.7
CDC9YDL164C OTU2P38747 307 aaKnown RBP4.42□□□□□ -1.7
CDC9YDL164C SFB3P38810 929 aa4.42□□□□□ -1.7
CDC9YDL164C SDP1P40479 209 aa4.42□□□□□ -1.7
CDC9YDL164C SEC24P40482 926 aaKnown RBP4.42□□□□□ -1.7
CDC9YDL164C BIO3P50277 480 aa4.42□□□□□ -1.7
CDC9YDL164C IMO32P53219 342 aa4.42□□□□□ -1.7
CDC9YDL164C ADE12P80210 433 aaKnown RBP4.42□□□□□ -1.7
CDC9YDL164C VPS64Q03944 604 aa4.42□□□□□ -1.7
CDC9YDL164C SYT1Q06836 1226 aa4.42□□□□□ -1.7
CDC9YDL164C CLP1Q08685 445 aaPredicted RBP4.42□□□□□ -1.7
CDC9YDL164C SLP1Q12232 587 aa4.42□□□□□ -1.7
CDC9YDL164C RPP1AP05318 106 aaPredicted RBP4.42□□□□□ -1.7
CDC9YDL164C RNR1P21524 888 aaKnown RBP4.42□□□□□ -1.7
CDC9YDL164C RML2P32611 393 aa4.42□□□□□ -1.7
CDC9YDL164C BUD2P33314 1104 aa4.42□□□□□ -1.7
CDC9YDL164C MAE1P36013 669 aaKnown RBP4.42□□□□□ -1.7
CDC9YDL164C PIM1P36775 1133 aa4.42□□□□□ -1.7
CDC9YDL164C REG2P38232 338 aa4.42□□□□□ -1.7
CDC9YDL164C EPL1P43572 832 aa4.42□□□□□ -1.7
CDC9YDL164C APT1P49435 187 aaKnown RBP4.42□□□□□ -1.7
CDC9YDL164C YGL242CP53066 181 aa4.42□□□□□ -1.7
CDC9YDL164C YGR111WP53265 400 aa4.42□□□□□ -1.7
CDC9YDL164C YNL050CP53952 270 aa4.42□□□□□ -1.7
CDC9YDL164C YMR111CQ04461 462 aaPredicted RBP4.42□□□□□ -1.7
CDC9YDL164C YDR461C-AQ2V2P7 80 aa4.42□□□□□ -1.7
CDC9YDL164C ECM3Q99252 613 aa4.42□□□□□ -1.7
CDC9YDL164C SSN2P38931 1420 aa4.41□□□□□ -1.7
CDC9YDL164C GAL80P04387 435 aa4.41□□□□□ -1.7
CDC9YDL164C ARD1P07347 238 aaPredicted RBP4.41□□□□□ -1.7
CDC9YDL164C PDC5P16467 563 aaKnown RBP4.41□□□□□ -1.7
CDC9YDL164C GEX1P25596 615 aa4.41□□□□□ -1.7
CDC9YDL164C FAA1P30624 700 aaKnown RBP4.41□□□□□ -1.7
CDC9YDL164C LTV1P34078 463 aa4.41□□□□□ -1.7
CDC9YDL164C IME4P41833 600 aa4.41□□□□□ -1.7
CDC9YDL164C ALK1P43633 760 aaKnown RBP4.41□□□□□ -1.7
CDC9YDL164C CTK2P46962 323 aa4.41□□□□□ -1.7
CDC9YDL164C PET130P47065 347 aa4.41□□□□□ -1.7
CDC9YDL164C YML037CQ03703 340 aa4.41□□□□□ -1.7
CDC9YDL164C RTT109Q07794 436 aa4.41□□□□□ -1.7
CDC9YDL164C TCO89Q08921 799 aa4.41□□□□□ -1.7
CDC9YDL164C RLM1Q12224 676 aa4.41□□□□□ -1.7
CDC9YDL164C YVC1Q12324 675 aa4.41□□□□□ -1.7
CDC9YDL164C GPM1P00950 247 aaKnown RBP4.41□□□□□ -1.7
CDC9YDL164C CAR2P07991 424 aaKnown RBP4.41□□□□□ -1.7
CDC9YDL164C RPS4AP0CX35 261 aaKnown RBP4.41□□□□□ -1.7
CDC9YDL164C RPS4BP0CX36 261 aaKnown RBP4.41□□□□□ -1.7
CDC9YDL164C UNG1P12887 359 aa4.41□□□□□ -1.7
CDC9YDL164C YCR061WP25639 631 aa4.41□□□□□ -1.7
CDC9YDL164C MRE11P32829 692 aa4.41□□□□□ -1.7
CDC9YDL164C PGM1P33401 570 aaKnown RBP4.41□□□□□ -1.7
CDC9YDL164C YKT6P36015 200 aaKnown RBP4.41□□□□□ -1.7
CDC9YDL164C CMC1P36064 111 aa4.41□□□□□ -1.7
CDC9YDL164C RRM3P38766 723 aa4.41□□□□□ -1.7
CDC9YDL164C ERC1P38767 581 aa4.41□□□□□ -1.7
CDC9YDL164C YHR078WP38799 552 aa4.41□□□□□ -1.7
CDC9YDL164C VPS45P38932 577 aa4.41□□□□□ -1.7
CDC9YDL164C GTS1P40956 396 aa4.41□□□□□ -1.7
CDC9YDL164C MTR3P48240 250 aaPredicted RBP4.41□□□□□ -1.7
CDC9YDL164C YGR012WP53206 393 aa4.41□□□□□ -1.7
CDC9YDL164C VPS38Q05919 439 aa4.41□□□□□ -1.7
CDC9YDL164C TY1A-NL1Q12391 440 aaKnown RBP4.41□□□□□ -1.7
CDC9YDL164C PRB1P09232 635 aa4.4□□□□□ -1.71
CDC9YDL164C SAC7P17121 654 aa4.4□□□□□ -1.71
CDC9YDL164C ELO2P25358 347 aa4.4□□□□□ -1.71
CDC9YDL164C ARC19P33204 171 aaKnown RBP4.4□□□□□ -1.71
CDC9YDL164C TOS1P38288 455 aa4.4□□□□□ -1.71
CDC9YDL164C SMC2P38989 1170 aaKnown RBP4.4□□□□□ -1.71
CDC9YDL164C SCC4P40090 624 aa4.4□□□□□ -1.71
CDC9YDL164C SWP82P43554 623 aa4.4□□□□□ -1.71
CDC9YDL164C DLD2P46681 530 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms