RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	CBS1	P14066	229 aa		5.8	□□□□□ -1.48
RPN5	YDL147W	VMA16	P23968	213 aa		5.8	□□□□□ -1.48
RPN5	YDL147W	RRP43	P25359	394 aa	Predicted RBP	5.8	□□□□□ -1.48
RPN5	YDL147W	OAR1	P35731	278 aa		5.8	□□□□□ -1.48
RPN5	YDL147W	NTR2	P36118	322 aa	Predicted RBP	5.8	□□□□□ -1.48
RPN5	YDL147W	REG2	P38232	338 aa		5.8	□□□□□ -1.48
RPN5	YDL147W	CHS7	P38843	316 aa		5.8	□□□□□ -1.48
RPN5	YDL147W	SEC31	P38968	1273 aa	Known RBP	5.8	□□□□□ -1.48
RPN5	YDL147W	TPA1	P40032	644 aa	Known RBP	5.8	□□□□□ -1.48
RPN5	YDL147W	YFL015C	P43578	164 aa		5.8	□□□□□ -1.48
RPN5	YDL147W	GND2	P53319	492 aa		5.8	□□□□□ -1.48
RPN5	YDL147W	NGL3	Q03210	505 aa		5.8	□□□□□ -1.48
RPN5	YDL147W	ARG7	Q04728	441 aa		5.8	□□□□□ -1.48
RPN5	YDL147W	PCL8	Q08966	492 aa		5.8	□□□□□ -1.48
RPN5	YDL147W	MRH1	Q12117	320 aa	Predicted RBP	5.8	□□□□□ -1.48
RPN5	YDL147W	RPL7B	Q12213	244 aa	Known RBP	5.8	□□□□□ -1.48
RPN5	YDL147W	MET17	P06106	444 aa		5.79	□□□□□ -1.48
RPN5	YDL147W	PMA2	P19657	947 aa		5.79	□□□□□ -1.48
RPN5	YDL147W	AAP1	P37898	856 aa	Known RBP	5.79	□□□□□ -1.48
RPN5	YDL147W	AFG3	P39925	761 aa		5.79	□□□□□ -1.48
RPN5	YDL147W	BUR6	P40096	142 aa		5.79	□□□□□ -1.48
RPN5	YDL147W	RGI2	P40188	164 aa		5.79	□□□□□ -1.48
RPN5	YDL147W	SPO22	P40511	975 aa		5.79	□□□□□ -1.48
RPN5	YDL147W	YGL036W	P53185	909 aa	Predicted RBP	5.79	□□□□□ -1.48
RPN5	YDL147W	INA17	Q02888	182 aa		5.79	□□□□□ -1.48
RPN5	YDL147W	BUD22	Q04347	519 aa	Known RBP	5.79	□□□□□ -1.48
RPN5	YDL147W	RPN13	O13563	156 aa		5.78	□□□□□ -1.48
RPN5	YDL147W	HXK2	P04807	486 aa	Known RBP	5.78	□□□□□ -1.48
RPN5	YDL147W	YSP3	P25036	478 aa		5.78	□□□□□ -1.48
RPN5	YDL147W	LCB1	P25045	558 aa	Known RBP	5.78	□□□□□ -1.48
RPN5	YDL147W	SAT4	P25333	603 aa	Known RBP	5.78	□□□□□ -1.48
RPN5	YDL147W	PTC6	P25646	442 aa		5.78	□□□□□ -1.48
RPN5	YDL147W	UGP1	P32861	499 aa	Known RBP	5.78	□□□□□ -1.48
RPN5	YDL147W	PXA2	P34230	853 aa		5.78	□□□□□ -1.48
RPN5	YDL147W	MOH1	P38191	138 aa		5.78	□□□□□ -1.48
RPN5	YDL147W	YNG2	P38806	282 aa	Known RBP	5.78	□□□□□ -1.48
RPN5	YDL147W	SWP82	P43554	623 aa		5.78	□□□□□ -1.48
RPN5	YDL147W	YGR066C	P53242	292 aa		5.78	□□□□□ -1.48
RPN5	YDL147W	IST1	P53843	298 aa	Predicted RBP	5.78	□□□□□ -1.48
RPN5	YDL147W	RSM28	Q03430	361 aa		5.78	□□□□□ -1.48
RPN5	YDL147W	YML037C	Q03703	340 aa		5.78	□□□□□ -1.48
RPN5	YDL147W	SPN1	Q06505	410 aa	Predicted RBP	5.78	□□□□□ -1.48
RPN5	YDL147W	GPN2	Q08726	347 aa	Predicted RBP	5.78	□□□□□ -1.48
RPN5	YDL147W	CIR2	Q08822	631 aa		5.78	□□□□□ -1.48
RPN5	YDL147W	SES1	P07284	462 aa	Known RBP	5.77	□□□□□ -1.49
RPN5	YDL147W	HEM1	P09950	548 aa	Predicted RBP	5.77	□□□□□ -1.49
RPN5	YDL147W	KAR3	P17119	729 aa		5.77	□□□□□ -1.49
RPN5	YDL147W	PDB1	P32473	366 aa	Known RBP	5.77	□□□□□ -1.49
RPN5	YDL147W	BYE1	P36106	594 aa		5.77	□□□□□ -1.49
RPN5	YDL147W	MUM2	P38236	366 aa		5.77	□□□□□ -1.49
RPN5	YDL147W	PHM8	P40025	321 aa		5.77	□□□□□ -1.49
RPN5	YDL147W	GIS1	Q03833	894 aa		5.77	□□□□□ -1.49
RPN5	YDL147W	HRD3	Q05787	833 aa		5.77	□□□□□ -1.49
RPN5	YDL147W	YEH1	Q07804	573 aa		5.77	□□□□□ -1.49
RPN5	YDL147W	LEA1	Q08963	238 aa	Predicted RBP	5.77	□□□□□ -1.49
RPN5	YDL147W	YJR112W-A	Q3E743	109 aa		5.77	□□□□□ -1.49
RPN5	YDL147W	Q0010	Q9ZZX9	128 aa		5.77	□□□□□ -1.49
RPN5	YDL147W	SRP54	P20424	541 aa	Known RBP	5.76	□□□□□ -1.49
RPN5	YDL147W	YIH1	P25637	258 aa		5.76	□□□□□ -1.49
RPN5	YDL147W	ORC2	P32833	620 aa		5.76	□□□□□ -1.49
RPN5	YDL147W	RPC34	P32910	317 aa		5.76	□□□□□ -1.49
RPN5	YDL147W	MTH1	P35198	433 aa		5.76	□□□□□ -1.49
RPN5	YDL147W	YKL050C	P35736	922 aa		5.76	□□□□□ -1.49
RPN5	YDL147W	GPD2	P41911	440 aa	Known RBP	5.76	□□□□□ -1.49
RPN5	YDL147W	TDA10	P42938	290 aa		5.76	□□□□□ -1.49
RPN5	YDL147W	STR3	P53101	465 aa	Known RBP	5.76	□□□□□ -1.49
RPN5	YDL147W	VPS73	P53142	486 aa	Known RBP	5.76	□□□□□ -1.49
RPN5	YDL147W	LCL3	P53153	274 aa		5.76	□□□□□ -1.49
RPN5	YDL147W	TMN2	Q04562	672 aa		5.76	□□□□□ -1.49
RPN5	YDL147W	ULA1	Q12059	462 aa		5.76	□□□□□ -1.49
RPN5	YDL147W	PNS1	Q12412	539 aa		5.76	□□□□□ -1.49
RPN5	YDL147W	BI2	P03873	423 aa		5.75	□□□□□ -1.49
RPN5	YDL147W	ADE5,7	P07244	802 aa	Known RBP	5.75	□□□□□ -1.49
RPN5	YDL147W	ROX1	P25042	368 aa		5.75	□□□□□ -1.49
RPN5	YDL147W	AAD3	P25612	363 aa		5.75	□□□□□ -1.49
RPN5	YDL147W	EXO1	P39875	702 aa		5.75	□□□□□ -1.49
RPN5	YDL147W	YJL043W	P47053	257 aa		5.75	□□□□□ -1.49
RPN5	YDL147W	LYS4	P49367	693 aa	Predicted RBP	5.75	□□□□□ -1.49
RPN5	YDL147W	YOR389W	Q08912	624 aa		5.75	□□□□□ -1.49
RPN5	YDL147W	DBF4	P32325	704 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	UBP13	P38187	747 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	YEL020C	P39994	560 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	RPN11	P43588	306 aa	Known RBP	5.74	□□□□□ -1.49
RPN5	YDL147W	DPB11	P47027	764 aa	Predicted RBP	5.74	□□□□□ -1.49
RPN5	YDL147W	YMR155W	Q03795	547 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	RTN2	Q12443	393 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	SPE4	Q12455	300 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	RTC1	Q08281	1341 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
RPN5	YDL147W	PCT1	P13259	424 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	SPE2	P21182	396 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	PWP1	P21304	576 aa	Known RBP	5.74	□□□□□ -1.49
RPN5	YDL147W	SPO11	P23179	398 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	ADH7	P25377	361 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	YJU2	P28320	278 aa	Predicted RBP	5.74	□□□□□ -1.49
RPN5	YDL147W	ERG3	P32353	365 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	PEX5	P35056	612 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	SRO77	P38163	1010 aa		5.74	□□□□□ -1.49
RPN5	YDL147W	DIA4	P38705	446 aa	Predicted RBP	5.74	□□□□□ -1.49
RPN5	YDL147W	ECM10	P39987	644 aa		5.74	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms