RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W ELM1P32801 640 aa1.79□□□□□ -2.12
TRM3YDL112W NOP4P37838 685 aaKnown RBP1.79□□□□□ -2.12
TRM3YDL112W EXO1P39875 702 aa1.79□□□□□ -2.12
TRM3YDL112W SDP1P40479 209 aa1.79□□□□□ -2.12
TRM3YDL112W SDS3P40505 327 aa1.79□□□□□ -2.12
TRM3YDL112W CTF18P49956 741 aa1.79□□□□□ -2.12
TRM3YDL112W SNU56Q03782 492 aaKnown RBP1.79□□□□□ -2.12
TRM3YDL112W CTK1Q03957 528 aaKnown RBP1.79□□□□□ -2.12
TRM3YDL112W SHS1Q07657 551 aa1.79□□□□□ -2.12
TRM3YDL112W HRT3Q12347 344 aa1.79□□□□□ -2.12
TRM3YDL112W MAL33P38157 468 aa1.79□□□□□ -2.12
TRM3YDL112W AIM23P47015 356 aa1.79□□□□□ -2.12
TRM3YDL112W NBP1P52919 319 aaPredicted RBP1.79□□□□□ -2.12
TRM3YDL112W PCL10P53124 433 aa1.79□□□□□ -2.12
TRM3YDL112W CWC21Q03375 135 aaKnown RBP1.79□□□□□ -2.12
TRM3YDL112W MZM1Q03429 123 aaPredicted RBP1.79□□□□□ -2.12
TRM3YDL112W TRS23Q03784 219 aa1.79□□□□□ -2.12
TRM3YDL112W RTN1Q04947 295 aaKnown RBP1.79□□□□□ -2.12
TRM3YDL112W UPC2Q12151 913 aa1.79□□□□□ -2.12
TRM3YDL112W CPA2P03965 1118 aaKnown RBP1.78□□□□□ -2.12
TRM3YDL112W EST1P17214 699 aaPredicted RBP1.78□□□□□ -2.12
TRM3YDL112W PPS1P38148 807 aa1.78□□□□□ -2.12
TRM3YDL112W NPR3P38742 1146 aa1.78□□□□□ -2.12
TRM3YDL112W ERC1P38767 581 aa1.78□□□□□ -2.12
TRM3YDL112W BAT1P38891 393 aaKnown RBP1.78□□□□□ -2.12
TRM3YDL112W UME6P39001 836 aa1.78□□□□□ -2.12
TRM3YDL112W ULP2P40537 1034 aaPredicted RBP1.78□□□□□ -2.12
TRM3YDL112W YCG1Q06680 1035 aa1.78□□□□□ -2.12
TRM3YDL112W BEM2P39960 2167 aaKnown RBP1.78□□□□□ -2.12
TRM3YDL112W TUF1P02992 437 aaKnown RBP1.78□□□□□ -2.12
TRM3YDL112W STE12P13574 688 aa1.78□□□□□ -2.12
TRM3YDL112W PRP4P20053 465 aaKnown RBP1.78□□□□□ -2.12
TRM3YDL112W RNR1P21524 888 aaKnown RBP1.78□□□□□ -2.12
TRM3YDL112W PDE1P22434 369 aa1.78□□□□□ -2.12
TRM3YDL112W SAT4P25333 603 aaKnown RBP1.78□□□□□ -2.12
TRM3YDL112W FRE1P32791 686 aa1.78□□□□□ -2.12
TRM3YDL112W UTH1P36135 365 aa1.78□□□□□ -2.12
TRM3YDL112W YKR078WP36158 585 aaKnown RBP1.78□□□□□ -2.12
TRM3YDL112W YJR061WP40355 935 aa1.78□□□□□ -2.12
TRM3YDL112W CAF16P43569 289 aa1.78□□□□□ -2.12
TRM3YDL112W EXG2P52911 562 aa1.78□□□□□ -2.12
TRM3YDL112W NMA2P53204 395 aa1.78□□□□□ -2.12
TRM3YDL112W TOF1P53840 1238 aa1.78□□□□□ -2.12
TRM3YDL112W TIM8P57744 87 aa1.78□□□□□ -2.12
TRM3YDL112W WAR1Q03631 944 aa1.78□□□□□ -2.12
TRM3YDL112W HSP82P02829 709 aaKnown RBP1.78□□□□□ -2.12
TRM3YDL112W SWI3P32591 825 aa1.78□□□□□ -2.12
TRM3YDL112W SGE1P33335 543 aa1.78□□□□□ -2.12
TRM3YDL112W GPP1P41277 250 aaKnown RBP1.78□□□□□ -2.12
TRM3YDL112W PIL1P53252 339 aaKnown RBP1.78□□□□□ -2.12
TRM3YDL112W DLT1Q04216 342 aa1.78□□□□□ -2.12
TRM3YDL112W SEG1Q04279 960 aa1.78□□□□□ -2.12
TRM3YDL112W GRX8Q05926 109 aa1.78□□□□□ -2.12
TRM3YDL112W SRO7Q12038 1033 aa1.78□□□□□ -2.12
TRM3YDL112W CWC2Q12046 339 aaPredicted RBP1.78□□□□□ -2.12
TRM3YDL112W USV1Q12132 391 aa1.78□□□□□ -2.12
TRM3YDL112W AI5_BETAQ9ZZX0 354 aa1.78□□□□□ -2.12
TRM3YDL112W TOR1P35169 2470 aa1.78□□□□□ -2.13
TRM3YDL112W ADE3P07245 946 aaKnown RBP1.77□□□□□ -2.13
TRM3YDL112W RPL4AP10664 362 aaKnown RBP1.77□□□□□ -2.13
TRM3YDL112W SIR1P21691 654 aa1.77□□□□□ -2.13
TRM3YDL112W CCR4P31384 837 aaKnown RBP1.77□□□□□ -2.13
TRM3YDL112W RPC82P32349 654 aa1.77□□□□□ -2.13
TRM3YDL112W YEL1P34225 687 aa1.77□□□□□ -2.13
TRM3YDL112W TMN3P40071 706 aa1.77□□□□□ -2.13
TRM3YDL112W GUF1P46943 645 aa1.77□□□□□ -2.13
TRM3YDL112W RTT101P47050 842 aa1.77□□□□□ -2.13
TRM3YDL112W RPL4BP49626 362 aaKnown RBP1.77□□□□□ -2.13
TRM3YDL112W COG8Q04632 607 aa1.77□□□□□ -2.13
TRM3YDL112W CDD1Q06549 142 aa1.77□□□□□ -2.13
TRM3YDL112W OMS1Q06668 471 aa1.77□□□□□ -2.13
TRM3YDL112W CDA2Q06703 312 aa1.77□□□□□ -2.13
TRM3YDL112W IWR1Q07532 353 aaPredicted RBP1.77□□□□□ -2.13
TRM3YDL112W DIA2Q08496 732 aaPredicted RBP1.77□□□□□ -2.13
TRM3YDL112W FRE5Q08908 694 aa1.77□□□□□ -2.13
TRM3YDL112W NBP2Q12163 236 aa1.77□□□□□ -2.13
TRM3YDL112W TOR2P32600 2474 aaKnown RBP1.77□□□□□ -2.13
TRM3YDL112W RPP2AP05319 106 aaKnown RBP1.77□□□□□ -2.13
TRM3YDL112W RIP1P08067 215 aa1.77□□□□□ -2.13
TRM3YDL112W MIS1P09440 975 aaKnown RBP1.77□□□□□ -2.13
TRM3YDL112W AEP2P22136 580 aa1.77□□□□□ -2.13
TRM3YDL112W MRP4P32902 394 aa1.77□□□□□ -2.13
TRM3YDL112W PRX1P34227 261 aaKnown RBP1.77□□□□□ -2.13
TRM3YDL112W KTR4P38131 464 aa1.77□□□□□ -2.13
TRM3YDL112W SIF2P38262 535 aa1.77□□□□□ -2.13
TRM3YDL112W ASG1P40467 964 aa1.77□□□□□ -2.13
TRM3YDL112W HSH155P49955 971 aaKnown RBP1.77□□□□□ -2.13
TRM3YDL112W MND1P53102 219 aa1.77□□□□□ -2.13
TRM3YDL112W ESBP6P53918 673 aa1.77□□□□□ -2.13
TRM3YDL112W PRM6Q04705 352 aa1.77□□□□□ -2.13
TRM3YDL112W UBR1P19812 1950 aa1.77□□□□□ -2.13
TRM3YDL112W ERG20P08524 352 aaKnown RBP1.77□□□□□ -2.13
TRM3YDL112W YKT6P36015 200 aaKnown RBP1.77□□□□□ -2.13
TRM3YDL112W UBS1P38290 277 aa1.77□□□□□ -2.13
TRM3YDL112W LEU5P38702 357 aa1.77□□□□□ -2.13
TRM3YDL112W LNP1P38878 278 aa1.77□□□□□ -2.13
TRM3YDL112W SET2P46995 733 aaKnown RBP1.77□□□□□ -2.13
TRM3YDL112W PYK2P52489 506 aaKnown RBP1.77□□□□□ -2.13
TRM3YDL112W IPI3P53877 555 aa1.77□□□□□ -2.13
TRM3YDL112W EIS1Q05050 843 aaKnown RBP1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms