RNA–Protein interactions for RNA: YBL022C

PIM1, Transcript of ATP-dependent Lon protease, yeast

Gene PIM1, Length 3,402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PIM1	YBL022C	MRPL40	P36534	297 aa		4.1	□□□□□ -1.75
PIM1	YBL022C	YBL036C	P38197	257 aa		4.1	□□□□□ -1.75
PIM1	YBL022C	MSS4	P38994	779 aa		4.1	□□□□□ -1.75
PIM1	YBL022C	DSS1	P39112	969 aa		4.1	□□□□□ -1.75
PIM1	YBL022C	YIL055C	P40523	627 aa	Known RBP	4.1	□□□□□ -1.75
PIM1	YBL022C	IRC8	P47046	822 aa		4.1	□□□□□ -1.75
PIM1	YBL022C	APP1	P53933	587 aa		4.1	□□□□□ -1.75
PIM1	YBL022C	NAM8	Q00539	523 aa	Known RBP	4.1	□□□□□ -1.75
PIM1	YBL022C	ATG16	Q03818	150 aa		4.1	□□□□□ -1.75
PIM1	YBL022C	UFO1	Q04511	668 aa		4.1	□□□□□ -1.75
PIM1	YBL022C	DUS3	Q06053	668 aa	Known RBP	4.1	□□□□□ -1.75
PIM1	YBL022C	APC5	Q08683	685 aa		4.1	□□□□□ -1.75
PIM1	YBL022C	TUM1	Q08686	304 aa	Known RBP	4.1	□□□□□ -1.75
PIM1	YBL022C	YOR352W	Q08816	343 aa		4.1	□□□□□ -1.75
PIM1	YBL022C	MCD1	Q12158	566 aa		4.1	□□□□□ -1.75
PIM1	YBL022C	APA1	P16550	321 aa	Known RBP	4.09	□□□□□ -1.75
PIM1	YBL022C	NUP2	P32499	720 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	UGA4	P32837	571 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	UBP11	P36026	717 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	MSR1	P38714	643 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	NDE1	P40215	560 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	AAD14	P42884	376 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	ROG3	P43602	733 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	CIT3	P43635	486 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	PHO86	P46956	311 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	ISM1	P48526	1002 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	CPR8	P53728	308 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	INN1	P53901	409 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	MRPS16	Q02608	121 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	SNZ1	Q03148	297 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	SPC2	Q04969	178 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	NNT1	Q05874	261 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	BCP1	Q06338	283 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	YET3	Q07451	203 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	DTD1	Q07648	150 aa	Known RBP	4.09	□□□□□ -1.75
PIM1	YBL022C	HRT3	Q12347	344 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	ATG31	Q12421	196 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	DBP2	P24783	546 aa	Known RBP	4.09	□□□□□ -1.75
PIM1	YBL022C	GPX2	P38143	162 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	LEU5	P38702	357 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	APE4	P38821	490 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	YER034W	P40022	185 aa	Known RBP	4.09	□□□□□ -1.75
PIM1	YBL022C	TED1	P40533	473 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	GTT1	P40582	234 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	CCT7	P42943	550 aa	Known RBP	4.09	□□□□□ -1.75
PIM1	YBL022C	IRC18	P47056	224 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	ENT4	Q07872	247 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	TY1A-DR3	Q12441	440 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	YKL018C-A	Q3E7A7	99 aa		4.09	□□□□□ -1.75
PIM1	YBL022C	NSP1	P14907	823 aa	Known RBP	4.09	□□□□□ -1.76
PIM1	YBL022C	AEP2	P22136	580 aa		4.09	□□□□□ -1.76
PIM1	YBL022C	AEP1	P32493	518 aa		4.09	□□□□□ -1.76
PIM1	YBL022C	JEN1	P36035	616 aa		4.09	□□□□□ -1.76
PIM1	YBL022C	YKR051W	P36142	418 aa		4.09	□□□□□ -1.76
PIM1	YBL022C	IMD2	P38697	523 aa	Known RBP	4.09	□□□□□ -1.76
PIM1	YBL022C	FRT2	P39734	528 aa		4.09	□□□□□ -1.76
PIM1	YBL022C	SPF1	P39986	1215 aa	Known RBP	4.09	□□□□□ -1.76
PIM1	YBL022C	MAD2	P40958	196 aa		4.09	□□□□□ -1.76
PIM1	YBL022C	YNL010W	P53981	241 aa	Known RBP	4.09	□□□□□ -1.76
PIM1	YBL022C	ECM9	Q02202	377 aa		4.09	□□□□□ -1.76
PIM1	YBL022C	YDR131C	Q03899	556 aa		4.09	□□□□□ -1.76
PIM1	YBL022C	ADE13	Q05911	482 aa	Known RBP	4.09	□□□□□ -1.76
PIM1	YBL022C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.76	not detected
PIM1	YBL022C	BMT6	Q12291	365 aa		4.09	□□□□□ -1.76
PIM1	YBL022C	LDB17	Q12342	491 aa		4.09	□□□□□ -1.76
PIM1	YBL022C	RTR2	Q12378	196 aa		4.09	□□□□□ -1.76
PIM1	YBL022C	LAG2	Q92325	660 aa		4.09	□□□□□ -1.76
PIM1	YBL022C	COB	P00163	385 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	BI4	P03879	638 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	PRI2	P20457	528 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	DIT1	P21623	536 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	DPH2	P32461	534 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	TMT1	P32643	299 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	STB5	P38699	743 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	RRF1	P38771	230 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	GEP4	P38812	185 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	CCT3	P39077	534 aa	Known RBP	4.08	□□□□□ -1.76
PIM1	YBL022C	JLP2	P40206	208 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	NUP82	P40368	713 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	DBP6	P53734	629 aa	Known RBP	4.08	□□□□□ -1.76
PIM1	YBL022C	ELA1	P53861	379 aa	Predicted RBP	4.08	□□□□□ -1.76
PIM1	YBL022C	MHR1	Q06630	226 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	BI3	Q9ZZW7	517 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	CYB2	P00175	591 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	GAL1	P04385	528 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	RRN3	P36070	627 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	GEF1	P37020	779 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	KTR4	P38131	464 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	CST26	P38226	397 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	EGD2	P38879	174 aa	Known RBP	4.08	□□□□□ -1.76
PIM1	YBL022C	PSA1	P41940	361 aa	Known RBP	4.08	□□□□□ -1.76
PIM1	YBL022C	ALY2	P47029	1046 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	DIA3	P52290	468 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	UBC12	P52491	188 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	HHO1	P53551	258 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	ARC35	P53731	342 aa	Known RBP	4.08	□□□□□ -1.76
PIM1	YBL022C	IMP4	P53941	290 aa	Known RBP	4.08	□□□□□ -1.76
PIM1	YBL022C	DCP1	Q12517	231 aa	Predicted RBP	4.08	□□□□□ -1.76
PIM1	YBL022C	MED11	Q99278	115 aa		4.08	□□□□□ -1.76
PIM1	YBL022C	AI4	P03878	556 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 16 ms