RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 ANAPC15P60006 121 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 DYNLL1P63167 89 aaKnown RBP7.98□□□□□ -1.13
UPF3B-205ENST00000636792 MAP3K10Q02779 954 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 FSTL1Q12841 308 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 KRT32Q14532 448 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 IMMTQ16891 758 aaKnown RBP7.98□□□□□ -1.13
UPF3B-205ENST00000636792 TSGA10IPQ3SY00 556 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 SUPT20HL1Q3ZLR7 823 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 FOXP4Q8IVH2 680 aaPredicted RBP7.98□□□□□ -1.13
UPF3B-205ENST00000636792 SMC1BQ8NDV3 1235 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 TGFBRAP1Q8WUH2 860 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 IL17RAQ96F46 866 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 SEC62Q99442 399 aaKnown RBP7.98□□□□□ -1.13
UPF3B-205ENST00000636792 MTA3Q9BTC8 594 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 TBC1D2Q9BYX2 928 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 LSG1Q9H089 658 aaKnown RBP7.98□□□□□ -1.13
UPF3B-205ENST00000636792 DEFB129Q9H1M3 183 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 CNNM2Q9H8M5 875 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 RRAGCQ9HB90 399 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 VEZTQ9HBM0 779 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 EPB41L4AQ9HCS5 686 aaPredicted RBP7.98□□□□□ -1.13
UPF3B-205ENST00000636792 MCM9Q9NXL9 1143 aa7.98□□□□□ -1.13
UPF3B-205ENST00000636792 PLIN4Q96Q06 1357 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 UTRNP46939 3433 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 SHTN1A0MZ66 631 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 CLRN2A0PK11 232 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 FOXP2O15409 715 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 TOMM70O94826 608 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 APPP05067 770 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 FGRP09769 529 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 ZKSCAN1P17029 563 aaPredicted RBP7.97□□□□□ -1.13
UPF3B-205ENST00000636792 GABPAQ06546 454 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 PDE4BQ07343 736 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 PICALMQ13492 652 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 RASA3Q14644 834 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 MAP3K11Q16584 847 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 MSS51Q4VC12 460 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 EAPPQ56P03 285 aaPredicted RBP7.97□□□□□ -1.13
UPF3B-205ENST00000636792 C12orf60Q5U649 245 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 BRICD5Q6PL45 260 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 KRT26Q7Z3Y9 468 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 SDR42E1Q8WUS8 393 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 STAG1Q8WVM7 1258 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 KCNB2Q92953 911 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 CCDC17Q96LX7 622 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 CSRNP1Q96S65 589 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 NMRK2Q9NPI5 230 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 DDX4Q9NQI0 724 aaKnown RBP7.97□□□□□ -1.13
UPF3B-205ENST00000636792 PRDM9Q9NQV7 894 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 SERPINB13Q9UIV8 391 aa7.97□□□□□ -1.13
UPF3B-205ENST00000636792 TCP10L2B9ZVM9 353 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 ZNF213O14771 459 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 ORC4O43929 436 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 PPP1R12BO60237 982 aaPredicted RBP7.96□□□□□ -1.14
UPF3B-205ENST00000636792 FGAP02671 866 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 POLR3DP05423 398 aaPredicted RBP7.96□□□□□ -1.14
UPF3B-205ENST00000636792 HMGB1P09429 215 aaKnown RBP7.96□□□□□ -1.14
UPF3B-205ENST00000636792 FECHP22830 423 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 HSPA4P34932 840 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 PPARAQ07869 468 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 NFIAQ12857 509 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 TRIM32Q13049 653 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 NECTIN1Q15223 517 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 CCDC178Q5BJE1 867 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 RBM26Q5T8P6 1007 aaKnown RBP7.96□□□□□ -1.14
UPF3B-205ENST00000636792 CTR9Q6PD62 1173 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 CCDC129Q6ZRS4 1044 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 C16orf86Q6ZW13 317 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 MAPKAPK5Q8IW41 473 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 ZSCAN29Q8IWY8 852 aaPredicted RBP7.96□□□□□ -1.14
UPF3B-205ENST00000636792 TEPSINQ96N21 525 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 REPIN1Q9BWE0 567 aaKnown RBP7.96□□□□□ -1.14
UPF3B-205ENST00000636792 TRIM34Q9BYJ4 488 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 BACH2Q9BYV9 841 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 IL25Q9H293 177 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 SYNPO2Q9UMS6 1093 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 RBM8AQ9Y5S9 174 aaKnown RBP7.96□□□□□ -1.14
UPF3B-205ENST00000636792 WDR19Q8NEZ3 1342 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 SSC5DA1L4H1 1573 aa7.96□□□□□ -1.14
UPF3B-205ENST00000636792 MYH4Q9Y623 1939 aa7.95□□□□□ -1.14
UPF3B-205ENST00000636792 PHIPQ8WWQ0 1821 aa7.95□□□□□ -1.14
UPF3B-205ENST00000636792 USP17L12C9JPN9 530 aa7.95□□□□□ -1.14
UPF3B-205ENST00000636792 USP17L21D6R901 530 aa7.95□□□□□ -1.14
UPF3B-205ENST00000636792 PRKAB2O43741 272 aa7.95□□□□□ -1.14
UPF3B-205ENST00000636792 CHGBP05060 677 aa7.95□□□□□ -1.14
UPF3B-205ENST00000636792 GCGRP47871 477 aa7.95□□□□□ -1.14
UPF3B-205ENST00000636792 RBM25P49756 843 aaKnown RBP7.95□□□□□ -1.14
UPF3B-205ENST00000636792 TRDNQ13061 729 aa7.95□□□□□ -1.14
UPF3B-205ENST00000636792 SLFNL1Q499Z3 407 aa7.95□□□□□ -1.14
UPF3B-205ENST00000636792 NOL9Q5SY16 702 aaKnown RBP7.95□□□□□ -1.14
UPF3B-205ENST00000636792 VPS53Q5VIR6 699 aa7.95□□□□□ -1.14
UPF3B-205ENST00000636792 TATDN1Q6P1N9 297 aa7.95□□□□□ -1.14
UPF3B-205ENST00000636792 CRACR2BQ8N4Y2 399 aaPredicted RBP7.95□□□□□ -1.14
UPF3B-205ENST00000636792 ZNF784Q8NCA9 323 aaPredicted RBP7.95□□□□□ -1.14
UPF3B-205ENST00000636792 MRGPRX2Q96LB1 330 aa7.95□□□□□ -1.14
UPF3B-205ENST00000636792 ZNF341Q9BYN7 854 aa7.95□□□□□ -1.14
UPF3B-205ENST00000636792 TM6SF1Q9BZW5 370 aa7.95□□□□□ -1.14
UPF3B-205ENST00000636792 KRT23Q9C075 422 aa7.95□□□□□ -1.14
UPF3B-205ENST00000636792 PCDHAC2Q9Y5I4 1007 aa7.95□□□□□ -1.14
UPF3B-205ENST00000636792 PTPRFP10586 1907 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms