RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 NUCB1Q02818 461 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 ASPHQ12797 758 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 MIER3Q7Z3K6 550 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 TNNQ9UQP3 1299 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 NUB1Q9Y5A7 615 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 PRDM15P57071 1507 aaPredicted RBP6.98□□□□□ -1.29
GABRB3-218ENST00000635994 GARSP41250 739 aaKnown RBP6.98□□□□□ -1.29
GABRB3-218ENST00000635994 MNAT1P51948 309 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 RBM10P98175 930 aaKnown RBP6.98□□□□□ -1.29
GABRB3-218ENST00000635994 MTMR3Q13615 1198 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 DPP9Q86TI2 863 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 RETREG2Q8NC44 543 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 CDHR1Q96JP9 859 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 PLCB1Q9NQ66 1216 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 DDX21Q9NR30 783 aaKnown RBP eCLIP6.98□□□□□ -1.29
GABRB3-218ENST00000635994 PKD2L1Q9P0L9 805 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 ARPP21Q9UBL0 812 aaPredicted RBP6.98□□□□□ -1.29
GABRB3-218ENST00000635994 CROCC2H7BZ55 1655 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 CEP152O94986 1710 aa6.98□□□□□ -1.29
GABRB3-218ENST00000635994 EIF3CLB5ME19 914 aaKnown RBP6.97□□□□□ -1.29
GABRB3-218ENST00000635994 EYA2O00167 538 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 CHMP2AO43633 222 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 MBD4O95243 580 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 HOXD10P28358 340 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 ELF1P32519 619 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 IFNA8P32881 189 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 ARHGEF16Q5VV41 709 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 BRINP3Q76B58 766 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 ZBTB33Q86T24 672 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 MAP7D3Q8IWC1 876 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 PPP4R1Q8TF05 950 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 GRK7Q8WTQ7 553 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 C16orf45Q96MC5 204 aaPredicted RBP6.97□□□□□ -1.29
GABRB3-218ENST00000635994 EIF3CQ99613 913 aaKnown RBP6.97□□□□□ -1.29
GABRB3-218ENST00000635994 EDEM3Q9BZQ6 932 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 LRWD1Q9UFC0 647 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 PHLPP2Q6ZVD8 1323 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 METP08581 1390 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 SYNMO15061 1565 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.97□□□□□ -1.29
GABRB3-218ENST00000635994 ADCY5O95622 1261 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 GTF2F1P35269 517 aaKnown RBP eCLIP6.97□□□□□ -1.29
GABRB3-218ENST00000635994 KPNA2P52292 529 aaKnown RBP6.97□□□□□ -1.29
GABRB3-218ENST00000635994 TBC1D8BQ0IIM8 1120 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 HHATQ5VTY9 493 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 NCAPH2Q6IBW4 605 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 NUDT18Q6ZVK8 323 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 CPXCR1Q8N123 301 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 ANKRD44Q8N8A2 993 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 MIGA1Q8NAN2 632 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 MICAL1Q8TDZ2 1067 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 LPIN2Q92539 896 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 PPANQ9NQ55 473 aaKnown RBP6.97□□□□□ -1.29
GABRB3-218ENST00000635994 PNMA3Q9UL41 463 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.97□□□□□ -1.29
GABRB3-218ENST00000635994 SOS2Q07890 1332 aaPredicted RBP6.97□□□□□ -1.29
GABRB3-218ENST00000635994 TLDC2A0PJX2 215 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 WDR64B1ANS9 1081 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 GAS7O60861 476 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 FOSP01100 380 aaPredicted RBP6.97□□□□□ -1.29
GABRB3-218ENST00000635994 ZSCAN20P17040 1043 aaPredicted RBP6.97□□□□□ -1.29
GABRB3-218ENST00000635994 SYT1P21579 422 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 PTGS1P23219 599 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 BPIFB4P59827 614 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 PPFIA1Q13136 1202 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 CASC4Q6P4E1 433 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 RAB44Q7Z6P3 723 aaPredicted RBP6.97□□□□□ -1.29
GABRB3-218ENST00000635994 SMC5Q8IY18 1101 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 ANKRD35Q8N283 1001 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 PARD3BQ8TEW8 1205 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 SDCCAG3Q96C92 435 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 RIC8AQ9NPQ8 531 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 CTTNBP2NLQ9P2B4 639 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 TTF2Q9UNY4 1162 aaKnown RBP6.97□□□□□ -1.29
GABRB3-218ENST00000635994 PPFIA4O75335 1185 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 ECM2O94769 699 aaPredicted RBP6.97□□□□□ -1.29
GABRB3-218ENST00000635994 TNNI1P19237 187 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 ATP11AP98196 1134 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 KRT81Q14533 505 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 GALNT17Q6IS24 598 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 SLFN12Q8IYM2 578 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 MYCT1Q8N699 235 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 RNF169Q8NCN4 708 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 BBOF1Q8ND07 529 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 IFT81Q8WYA0 676 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 IP6K1Q92551 441 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 LLPHQ9BRT6 129 aaKnown RBP6.97□□□□□ -1.29
GABRB3-218ENST00000635994 PAGR1Q9BTK6 254 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 ANO3Q9BYT9 981 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 SKILP12757 684 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 TRIM27P14373 513 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 POSTNQ15063 836 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 TAF11Q15544 211 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 GKAP1Q5VSY0 366 aaPredicted RBP6.97□□□□□ -1.29
GABRB3-218ENST00000635994 GADL1Q6ZQY3 521 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 CPSF3Q9UKF6 684 aaKnown RBP6.97□□□□□ -1.29
GABRB3-218ENST00000635994 IQGAP3Q86VI3 1631 aa6.97□□□□□ -1.29
GABRB3-218ENST00000635994 ADGRL3Q9HAR2 1447 aa6.96□□□□□ -1.29
GABRB3-218ENST00000635994 HDAC1Q13547 482 aaPredicted RBP6.96□□□□□ -1.29
GABRB3-218ENST00000635994 KLHL40Q2TBA0 621 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms