RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 NISCHQ9Y2I1 1504 aa10.98□□□□□ -0.65
GABRB3-218ENST00000635994 DCAF8L2P0C7V8 631 aa10.72□□□□□ -0.69
GABRB3-218ENST00000635994 FAM9AQ8IZU1 332 aaPredicted RBP10.28□□□□□ -0.76
GABRB3-218ENST00000635994 PELP1Q8IZL8 1130 aaKnown RBP10.19□□□□□ -0.78
GABRB3-218ENST00000635994 APLP2Q06481 763 aa10.01□□□□□ -0.81
GABRB3-218ENST00000635994 SUPT5HO00267 1087 aaKnown RBP9.87□□□□□ -0.83
GABRB3-218ENST00000635994 ABCC9O60706 1549 aa9.77□□□□□ -0.84
GABRB3-218ENST00000635994 CCER1Q8TC90 406 aaPredicted RBP9.73□□□□□ -0.85
GABRB3-218ENST00000635994 SHROOM4Q9ULL8 1493 aa9.65□□□□□ -0.87
GABRB3-218ENST00000635994 ERICH6Q7L0X2 663 aa9.59□□□□□ -0.87
GABRB3-218ENST00000635994 EHMT2Q96KQ7 1210 aa9.54□□□□□ -0.88
GABRB3-218ENST00000635994 CCDC180Q9P1Z9 1646 aa9.53□□□□□ -0.88
GABRB3-218ENST00000635994 ATP1B4Q9UN42 357 aaPredicted RBP9.46□□□□□ -0.89
GABRB3-218ENST00000635994 CENPBP07199 599 aaPredicted RBP9.43□□□□□ -0.9
GABRB3-218ENST00000635994 NEFLP07196 543 aa9.41□□□□□ -0.9
GABRB3-218ENST00000635994 ZEB1P37275 1124 aaPredicted RBP9.4□□□□□ -0.9
GABRB3-218ENST00000635994 PABPN1Q86U42 306 aaKnown RBP eCLIP9.4□□□□□ -0.9
GABRB3-218ENST00000635994 MYT1LQ9UL68 1186 aa9.38□□□□□ -0.91
GABRB3-218ENST00000635994 RB1CC1Q8TDY2 1594 aa9.32□□□□□ -0.92
GABRB3-218ENST00000635994 UBTFP17480 764 aaKnown RBP9.3□□□□□ -0.92
GABRB3-218ENST00000635994 RANGAP1P46060 587 aaPredicted RBP9.29□□□□□ -0.92
GABRB3-218ENST00000635994 TRIM41Q8WV44 630 aa9.29□□□□□ -0.92
GABRB3-218ENST00000635994 DAXXQ9UER7 740 aaPredicted RBP9.29□□□□□ -0.92
GABRB3-218ENST00000635994 PCGF6Q9BYE7 350 aa9.25□□□□□ -0.93
GABRB3-218ENST00000635994 YTHDC1Q96MU7 727 aaKnown RBP9.25□□□□□ -0.93
GABRB3-218ENST00000635994 TTBK1Q5TCY1 1321 aaPredicted RBP9.24□□□□□ -0.93
GABRB3-218ENST00000635994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.23□□□□□ -0.93
GABRB3-218ENST00000635994 HNRNPUL2Q1KMD3 747 aaKnown RBP9.23□□□□□ -0.93
GABRB3-218ENST00000635994 NACADO15069 1562 aa9.18□□□□□ -0.94
GABRB3-218ENST00000635994 MYT1Q01538 1121 aa9.15□□□□□ -0.94
GABRB3-218ENST00000635994 SCRIBQ14160 1630 aa9.14□□□□□ -0.95
GABRB3-218ENST00000635994 ZCCHC6Q5VYS8 1495 aaKnown RBP9.08□□□□□ -0.96
GABRB3-218ENST00000635994 SLC4A1APQ9BWU0 796 aaKnown RBP9.07□□□□□ -0.96
GABRB3-218ENST00000635994 POLR3GLQ9BT43 218 aa9.05□□□□□ -0.96
GABRB3-218ENST00000635994 ZBTB47Q9UFB7 747 aaPredicted RBP9.03□□□□□ -0.96
GABRB3-218ENST00000635994 CLSPNQ9HAW4 1339 aa8.99□□□□□ -0.97
GABRB3-218ENST00000635994 CHIC1Q5VXU3 224 aa8.99□□□□□ -0.97
GABRB3-218ENST00000635994 ZNF316A6NFI3 1004 aaPredicted RBP8.98□□□□□ -0.97
GABRB3-218ENST00000635994 NEFMP07197 916 aa8.97□□□□□ -0.97
GABRB3-218ENST00000635994 ITGAEP38570 1179 aa8.91□□□□□ -0.98
GABRB3-218ENST00000635994 RTL5Q5HYW3 569 aaPredicted RBP8.9□□□□□ -0.98
GABRB3-218ENST00000635994 ESF1Q9H501 851 aaKnown RBP8.89□□□□□ -0.99
GABRB3-218ENST00000635994 BCANQ96GW7 911 aa8.86□□□□□ -0.99
GABRB3-218ENST00000635994 DCAF1Q9Y4B6 1507 aa8.86□□□□□ -0.99
GABRB3-218ENST00000635994 ERCC6Q03468 1493 aa8.86□□□□□ -0.99
GABRB3-218ENST00000635994 FBLN2P98095 1184 aa8.84□□□□□ -0.99
GABRB3-218ENST00000635994 TRIM52Q96A61 297 aa8.82□□□□□ -1
GABRB3-218ENST00000635994 TRIM26Q12899 539 aaPredicted RBP8.82□□□□□ -1
GABRB3-218ENST00000635994 SLC24A1O60721 1099 aa8.81□□□□□ -1
GABRB3-218ENST00000635994 MYO15BQ96JP2 1530 aa8.79□□□□□ -1
GABRB3-218ENST00000635994 BAZ1BQ9UIG0 1483 aaKnown RBP8.77□□□□□ -1
GABRB3-218ENST00000635994 NPM1P06748 294 aaKnown RBP eCLIP8.77□□□□□ -1.01
GABRB3-218ENST00000635994 CANXP27824 592 aaKnown RBP8.76□□□□□ -1.01
GABRB3-218ENST00000635994 CNGB1Q14028 1251 aaPredicted RBP8.76□□□□□ -1.01
GABRB3-218ENST00000635994 FAM50AQ14320 339 aaKnown RBP8.76□□□□□ -1.01
GABRB3-218ENST00000635994 CDK11AQ9UQ88 783 aaPredicted RBP8.76□□□□□ -1.01
GABRB3-218ENST00000635994 CECR2Q9BXF3 1484 aa8.74□□□□□ -1.01
GABRB3-218ENST00000635994 STAG3Q9UJ98 1225 aa8.71□□□□□ -1.01
GABRB3-218ENST00000635994 BAZ1AQ9NRL2 1556 aaPredicted RBP8.68□□□□□ -1.02
GABRB3-218ENST00000635994 NPM2Q86SE8 214 aaKnown RBP8.68□□□□□ -1.02
GABRB3-218ENST00000635994 SMARCA2P51531 1590 aa8.67□□□□□ -1.02
GABRB3-218ENST00000635994 ANP32CO43423 234 aa8.67□□□□□ -1.02
GABRB3-218ENST00000635994 CDK11BP21127 795 aaKnown RBP8.67□□□□□ -1.02
GABRB3-218ENST00000635994 PPARGC1BQ86YN6 1023 aaKnown RBP8.67□□□□□ -1.02
GABRB3-218ENST00000635994 ZNF326Q5BKZ1 582 aaKnown RBP8.66□□□□□ -1.02
GABRB3-218ENST00000635994 ANP32BQ92688 251 aaKnown RBP8.66□□□□□ -1.02
GABRB3-218ENST00000635994 PDS5BQ9NTI5 1447 aa8.61□□□□□ -1.03
GABRB3-218ENST00000635994 CHMP7Q8WUX9 453 aaPredicted RBP8.6□□□□□ -1.03
GABRB3-218ENST00000635994 HRCP23327 699 aa8.6□□□□□ -1.03
GABRB3-218ENST00000635994 UPF2Q9HAU5 1272 aaKnown RBP8.58□□□□□ -1.04
GABRB3-218ENST00000635994 NEUROD1Q13562 356 aa8.58□□□□□ -1.04
GABRB3-218ENST00000635994 HSP90AA1P07900 732 aaKnown RBP8.56□□□□□ -1.04
GABRB3-218ENST00000635994 CHGAP10645 457 aaKnown RBP8.55□□□□□ -1.04
GABRB3-218ENST00000635994 ZNF777Q9ULD5 760 aaPredicted RBP8.53□□□□□ -1.04
GABRB3-218ENST00000635994 BCL11AQ9H165 835 aa8.53□□□□□ -1.04
GABRB3-218ENST00000635994 ANP32AP39687 249 aaKnown RBP8.52□□□□□ -1.05
GABRB3-218ENST00000635994 EIF4G1Q04637 1599 aaKnown RBP8.52□□□□□ -1.05
GABRB3-218ENST00000635994 ACIN1Q9UKV3 1341 aaKnown RBP8.52□□□□□ -1.05
GABRB3-218ENST00000635994 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.51□□□□□ -1.05
GABRB3-218ENST00000635994 DIEXFQ68CQ4 756 aaKnown RBP8.5□□□□□ -1.05
GABRB3-218ENST00000635994 RSF1Q96T23 1441 aaPredicted RBP8.5□□□□□ -1.05
GABRB3-218ENST00000635994 EIF5BO60841 1220 aaKnown RBP8.49□□□□□ -1.05
GABRB3-218ENST00000635994 SCAF1Q9H7N4 1312 aaKnown RBP8.49□□□□□ -1.05
GABRB3-218ENST00000635994 CC2D2AQ9P2K1 1620 aa8.49□□□□□ -1.05
GABRB3-218ENST00000635994 MYH16Q9H6N6 1097 aa8.48□□□□□ -1.05
GABRB3-218ENST00000635994 HAP1P54257 671 aaPredicted RBP8.48□□□□□ -1.05
GABRB3-218ENST00000635994 PLPPR3Q6T4P5 718 aa8.47□□□□□ -1.05
GABRB3-218ENST00000635994 A0A0G2JS52 829 aa8.47□□□□□ -1.05
GABRB3-218ENST00000635994 SMARCA4P51532 1647 aa8.47□□□□□ -1.05
GABRB3-218ENST00000635994 ATAD2BQ9ULI0 1458 aa8.46□□□□□ -1.05
GABRB3-218ENST00000635994 C14orf37Q86TY3 774 aa8.46□□□□□ -1.06
GABRB3-218ENST00000635994 CEP164Q9UPV0 1460 aa8.45□□□□□ -1.06
GABRB3-218ENST00000635994 TSPY4P0CV99 314 aa8.45□□□□□ -1.06
GABRB3-218ENST00000635994 TSPY10P0CW01 314 aa8.45□□□□□ -1.06
GABRB3-218ENST00000635994 PPP1R15AO75807 674 aaPredicted RBP8.45□□□□□ -1.06
GABRB3-218ENST00000635994 TRHP20396 242 aaPredicted RBP8.44□□□□□ -1.06
GABRB3-218ENST00000635994 CADPSQ9ULU8 1353 aa8.43□□□□□ -1.06
GABRB3-218ENST00000635994 MROH2BQ7Z745 1585 aa8.42□□□□□ -1.06
GABRB3-218ENST00000635994 TONSLQ96HA7 1378 aa8.41□□□□□ -1.06
GABRB3-218ENST00000635994 WDR43Q15061 677 aaKnown RBP eCLIP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms