RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 RABEP2Q9H5N1 569 aa12.26□□□□□ -0.45
FAM3A-221ENST00000612856 FBXO3Q9UK99 471 aa12.26□□□□□ -0.45
FAM3A-221ENST00000612856 CSPG5O95196 566 aa12.25□□□□□ -0.45
FAM3A-221ENST00000612856 RFX5P48382 616 aaPredicted RBP12.25□□□□□ -0.45
FAM3A-221ENST00000612856 DNA2P51530 1060 aa12.25□□□□□ -0.45
FAM3A-221ENST00000612856 CCDC178Q5BJE1 867 aa12.25□□□□□ -0.45
FAM3A-221ENST00000612856 EEF2KMTQ96G04 330 aa12.25□□□□□ -0.45
FAM3A-221ENST00000612856 CARD6Q9BX69 1037 aa12.25□□□□□ -0.45
FAM3A-221ENST00000612856 SCAND2PQ9GZW5 306 aaPredicted RBP12.25□□□□□ -0.45
FAM3A-221ENST00000612856 ADAMTSL3P82987 1691 aa12.25□□□□□ -0.45
FAM3A-221ENST00000612856 A0A1B0GVL5 298 aa12.25□□□□□ -0.45
FAM3A-221ENST00000612856 MYO1CO00159 1063 aa12.25□□□□□ -0.45
FAM3A-221ENST00000612856 TXKP42681 527 aa12.25□□□□□ -0.45
FAM3A-221ENST00000612856 CC2D2BQ6DHV5 1058 aa12.25□□□□□ -0.45
FAM3A-221ENST00000612856 DIS3L2Q8IYB7 885 aaKnown RBP12.25□□□□□ -0.45
FAM3A-221ENST00000612856 SERPINB13Q9UIV8 391 aa12.25□□□□□ -0.45
FAM3A-221ENST00000612856 CAMTA1Q9Y6Y1 1673 aa12.25□□□□□ -0.45
FAM3A-221ENST00000612856 CTIFO43310 598 aaKnown RBP12.25□□□□□ -0.45
FAM3A-221ENST00000612856 STX17P56962 302 aa12.25□□□□□ -0.45
FAM3A-221ENST00000612856 ATG9AQ7Z3C6 839 aa12.25□□□□□ -0.45
FAM3A-221ENST00000612856 ZNF654Q8IZM8 581 aa12.25□□□□□ -0.45
FAM3A-221ENST00000612856 CCDC12Q8WUD4 166 aaPredicted RBP12.25□□□□□ -0.45
FAM3A-221ENST00000612856 NAT10Q9H0A0 1025 aaKnown RBP12.25□□□□□ -0.45
FAM3A-221ENST00000612856 RNF216Q9NWF9 866 aaPredicted RBP12.25□□□□□ -0.45
FAM3A-221ENST00000612856 SETQ01105 290 aaPredicted RBP12.24□□□□□ -0.45
FAM3A-221ENST00000612856 PAF1Q8N7H5 531 aa12.24□□□□□ -0.45
FAM3A-221ENST00000612856 MAP4K1Q92918 833 aa12.24□□□□□ -0.45
FAM3A-221ENST00000612856 FAM212AQ96EL1 285 aa12.24□□□□□ -0.45
FAM3A-221ENST00000612856 AIFM3Q96NN9 605 aa12.24□□□□□ -0.45
FAM3A-221ENST00000612856 CLCN6P51797 869 aa12.24□□□□□ -0.45
FAM3A-221ENST00000612856 ABCB5Q2M3G0 1257 aa12.24□□□□□ -0.45
FAM3A-221ENST00000612856 CDC37L1Q7L3B6 337 aa12.24□□□□□ -0.45
FAM3A-221ENST00000612856 MICALL1Q8N3F8 863 aa12.24□□□□□ -0.45
FAM3A-221ENST00000612856 AOPEPQ8N6M6 819 aa12.24□□□□□ -0.45
FAM3A-221ENST00000612856 TBC1D16Q8TBP0 767 aa12.24□□□□□ -0.45
FAM3A-221ENST00000612856 ARFGAP3Q9NP61 516 aa12.24□□□□□ -0.45
FAM3A-221ENST00000612856 USP42Q9H9J4 1324 aaKnown RBP12.24□□□□□ -0.45
FAM3A-221ENST00000612856 ADRA2BP18089 450 aa12.24□□□□□ -0.45
FAM3A-221ENST00000612856 USP8P40818 1118 aa12.24□□□□□ -0.45
FAM3A-221ENST00000612856 TNFAIP1Q13829 316 aa12.24□□□□□ -0.45
FAM3A-221ENST00000612856 ZNF827Q17R98 1081 aa12.24□□□□□ -0.45
FAM3A-221ENST00000612856 WWC2Q6AWC2 1192 aa12.24□□□□□ -0.45
FAM3A-221ENST00000612856 PLEKHA4Q9H4M7 779 aa12.24□□□□□ -0.45
FAM3A-221ENST00000612856 C6orf50Q9HD87 102 aa12.24□□□□□ -0.45
FAM3A-221ENST00000612856 KLRF2D3W0D1 207 aa12.23□□□□□ -0.45
FAM3A-221ENST00000612856 GH2P01242 217 aa12.23□□□□□ -0.45
FAM3A-221ENST00000612856 GNAQP50148 359 aa12.23□□□□□ -0.45
FAM3A-221ENST00000612856 NECTIN1Q15223 517 aa12.23□□□□□ -0.45
FAM3A-221ENST00000612856 ZNF34Q8IZ26 560 aa12.23□□□□□ -0.45
FAM3A-221ENST00000612856 NTSR2O95665 410 aa12.23□□□□□ -0.45
FAM3A-221ENST00000612856 ADD2P35612 726 aa12.23□□□□□ -0.45
FAM3A-221ENST00000612856 CCDC144BQ3MJ40 725 aa12.23□□□□□ -0.45
FAM3A-221ENST00000612856 NUP88Q99567 741 aaPredicted RBP12.23□□□□□ -0.45
FAM3A-221ENST00000612856 CEP131Q9UPN4 1083 aa12.23□□□□□ -0.45
FAM3A-221ENST00000612856 CPDO75976 1380 aa12.23□□□□□ -0.45
FAM3A-221ENST00000612856 CRKP46108 304 aa12.23□□□□□ -0.45
FAM3A-221ENST00000612856 EVCP57679 992 aa12.23□□□□□ -0.45
FAM3A-221ENST00000612856 GNG11P61952 73 aa12.23□□□□□ -0.45
FAM3A-221ENST00000612856 RASSF7Q02833 373 aa12.23□□□□□ -0.45
FAM3A-221ENST00000612856 STIM1Q13586 685 aa12.23□□□□□ -0.45
FAM3A-221ENST00000612856 AXDND1Q5T1B0 1012 aaPredicted RBP12.23□□□□□ -0.45
FAM3A-221ENST00000612856 NCAPG2Q86XI2 1143 aa12.23□□□□□ -0.45
FAM3A-221ENST00000612856 SMC1AQ14683 1233 aaKnown RBP12.22□□□□□ -0.45
FAM3A-221ENST00000612856 RTKN2Q8IZC4 609 aa12.22□□□□□ -0.45
FAM3A-221ENST00000612856 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.22□□□□□ -0.45
FAM3A-221ENST00000612856 MRVI1Q9Y6F6 885 aa12.22□□□□□ -0.45
FAM3A-221ENST00000612856 PNMA6AP0CW24 399 aaPredicted RBP12.22□□□□□ -0.45
FAM3A-221ENST00000612856 CASQ1P31415 396 aa12.22□□□□□ -0.45
FAM3A-221ENST00000612856 LRRC8AQ8IWT6 810 aa12.22□□□□□ -0.45
FAM3A-221ENST00000612856 RAB34Q9BZG1 259 aa12.22□□□□□ -0.45
FAM3A-221ENST00000612856 CENPHQ9H3R5 247 aa12.22□□□□□ -0.45
FAM3A-221ENST00000612856 ZSWIM6Q9HCJ5 1215 aa12.22□□□□□ -0.45
FAM3A-221ENST00000612856 RTEL1Q9NZ71 1219 aa12.22□□□□□ -0.45
FAM3A-221ENST00000612856 TESPA1A2RU30 521 aaPredicted RBP12.22□□□□□ -0.45
FAM3A-221ENST00000612856 KIF2AO00139 706 aaPredicted RBP12.22□□□□□ -0.45
FAM3A-221ENST00000612856 PTPN21Q16825 1174 aa12.22□□□□□ -0.45
FAM3A-221ENST00000612856 SLFN13Q68D06 897 aa12.22□□□□□ -0.45
FAM3A-221ENST00000612856 LRP10Q7Z4F1 713 aa12.22□□□□□ -0.45
FAM3A-221ENST00000612856 SYCP3Q8IZU3 236 aa12.22□□□□□ -0.45
FAM3A-221ENST00000612856 BANK1Q8NDB2 785 aa12.22□□□□□ -0.45
FAM3A-221ENST00000612856 SMARCE1Q969G3 411 aa12.22□□□□□ -0.45
FAM3A-221ENST00000612856 DDX19AQ9NUU7 478 aaKnown RBP12.22□□□□□ -0.45
FAM3A-221ENST00000612856 ZSWIM5Q9P217 1185 aa12.22□□□□□ -0.45
FAM3A-221ENST00000612856 FZD1Q9UP38 647 aa12.22□□□□□ -0.45
FAM3A-221ENST00000612856 CIAO1O76071 339 aa12.21□□□□□ -0.45
FAM3A-221ENST00000612856 ARID4AP29374 1257 aaPredicted RBP12.21□□□□□ -0.45
FAM3A-221ENST00000612856 RIPOR2Q9Y4F9 1068 aa12.21□□□□□ -0.45
FAM3A-221ENST00000612856 PXDNLA1KZ92 1463 aa12.21□□□□□ -0.45
FAM3A-221ENST00000612856 SYKP43405 635 aa12.21□□□□□ -0.45
FAM3A-221ENST00000612856 CUL4AQ13619 759 aa12.21□□□□□ -0.45
FAM3A-221ENST00000612856 ZMYM1Q5SVZ6 1142 aa12.21□□□□□ -0.45
FAM3A-221ENST00000612856 KRT26Q7Z3Y9 468 aa12.21□□□□□ -0.45
FAM3A-221ENST00000612856 CALML4Q96GE6 196 aa12.21□□□□□ -0.45
FAM3A-221ENST00000612856 WRNIP1Q96S55 665 aa12.21□□□□□ -0.45
FAM3A-221ENST00000612856 KCNQ5Q9NR82 932 aa12.21□□□□□ -0.45
FAM3A-221ENST00000612856 CCNT1O60563 726 aaKnown RBP12.21□□□□□ -0.46
FAM3A-221ENST00000612856 BICD1Q96G01 975 aa12.21□□□□□ -0.46
FAM3A-221ENST00000612856 COA1Q9GZY4 146 aa12.21□□□□□ -0.46
FAM3A-221ENST00000612856 CNOT7Q9UIV1 285 aaKnown RBP12.21□□□□□ -0.46
FAM3A-221ENST00000612856 COL5A2P05997 1499 aaPredicted RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms