RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 BAZ2AQ9UIF9 1905 aaKnown RBP28.53■■■□□ 2.16
MMP28-203ENST00000612672 SMCHD1A6NHR9 2005 aa28.52■■■□□ 2.16
MMP28-203ENST00000612672 COBLO75128 1261 aa28.52■■■□□ 2.16
MMP28-203ENST00000612672 C9orf50Q5SZB4 431 aa28.52■■■□□ 2.16
MMP28-203ENST00000612672 CLEC10AQ8IUN9 316 aa28.52■■■□□ 2.16
MMP28-203ENST00000612672 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.52■■■□□ 2.16
MMP28-203ENST00000612672 LBHD1Q9BQE6 289 aaPredicted RBP28.52■■■□□ 2.16
MMP28-203ENST00000612672 ATP11BQ9Y2G3 1177 aa28.52■■■□□ 2.16
MMP28-203ENST00000612672 MSCO60682 206 aa28.51■■■□□ 2.15
MMP28-203ENST00000612672 SLC44A5Q8NCS7 719 aa28.51■■■□□ 2.15
MMP28-203ENST00000612672 CABP5Q9NP86 173 aa28.51■■■□□ 2.15
MMP28-203ENST00000612672 EXOC6BQ9Y2D4 811 aa28.51■■■□□ 2.15
MMP28-203ENST00000612672 CYP2D6P10635 497 aa28.5■■■□□ 2.15
MMP28-203ENST00000612672 MAP3K12Q12852 859 aa28.5■■■□□ 2.15
MMP28-203ENST00000612672 SHHQ15465 462 aa28.5■■■□□ 2.15
MMP28-203ENST00000612672 PRAMEF19Q5SWL8 479 aa28.5■■■□□ 2.15
MMP28-203ENST00000612672 CERS3Q8IU89 383 aa28.5■■■□□ 2.15
MMP28-203ENST00000612672 SPATC1LQ9H0A9 340 aa28.5■■■□□ 2.15
MMP28-203ENST00000612672 OLFML2BQ68BL8 750 aa28.49■■■□□ 2.15
MMP28-203ENST00000612672 CEP85Q6P2H3 762 aa28.49■■■□□ 2.15
MMP28-203ENST00000612672 MUC3AQ02505 3323 aa28.49■■■□□ 2.15
MMP28-203ENST00000612672 PLXNA1Q9UIW2 1896 aa28.49■■■□□ 2.15
MMP28-203ENST00000612672 SMIM22K7EJ46 135 aa28.48■■■□□ 2.15
MMP28-203ENST00000612672 POLR3DP05423 398 aaPredicted RBP28.48■■■□□ 2.15
MMP28-203ENST00000612672 ERCC3P19447 782 aa28.48■■■□□ 2.15
MMP28-203ENST00000612672 TRIM60Q495X7 471 aa28.48■■■□□ 2.15
MMP28-203ENST00000612672 SLC39A5Q6ZMH5 540 aa28.48■■■□□ 2.15
MMP28-203ENST00000612672 SH3RF1Q7Z6J0 888 aa28.48■■■□□ 2.15
MMP28-203ENST00000612672 DPP9Q86TI2 863 aa28.48■■■□□ 2.15
MMP28-203ENST00000612672 AACSQ86V21 672 aa28.48■■■□□ 2.15
MMP28-203ENST00000612672 ITPRIPQ8IWB1 547 aa28.48■■■□□ 2.15
MMP28-203ENST00000612672 SDR42E1Q8WUS8 393 aa28.48■■■□□ 2.15
MMP28-203ENST00000612672 MAGEB6P1A0A0J9YX57 407 aa28.47■■■□□ 2.15
MMP28-203ENST00000612672 CCER2I3L3R5 266 aa28.47■■■□□ 2.15
MMP28-203ENST00000612672 PDE6AP16499 860 aa28.47■■■□□ 2.15
MMP28-203ENST00000612672 COG2Q14746 738 aa28.47■■■□□ 2.15
MMP28-203ENST00000612672 SNX17Q15036 470 aa28.47■■■□□ 2.15
MMP28-203ENST00000612672 SIAH1Q8IUQ4 282 aa28.47■■■□□ 2.15
MMP28-203ENST00000612672 TANGO6Q9C0B7 1094 aa28.47■■■□□ 2.15
MMP28-203ENST00000612672 MPHOSPH10O00566 681 aaKnown RBP28.46■■■□□ 2.15
MMP28-203ENST00000612672 LCORLQ8N3X6 602 aa28.46■■■□□ 2.15
MMP28-203ENST00000612672 PDLIM7Q9NR12 457 aa28.46■■■□□ 2.15
MMP28-203ENST00000612672 MCM9Q9NXL9 1143 aa28.46■■■□□ 2.15
MMP28-203ENST00000612672 TCRBV5S4A2TA0A5A2 114 aa28.45■■■□□ 2.14
MMP28-203ENST00000612672 SEPT4O43236 478 aa28.45■■■□□ 2.14
MMP28-203ENST00000612672 SLFNL1Q499Z3 407 aa28.45■■■□□ 2.14
MMP28-203ENST00000612672 FAM47AQ5JRC9 791 aa28.45■■■□□ 2.14
MMP28-203ENST00000612672 ZNF697Q5TEC3 545 aa28.45■■■□□ 2.14
MMP28-203ENST00000612672 SHCBP1Q8NEM2 672 aa28.45■■■□□ 2.14
MMP28-203ENST00000612672 BADQ92934 168 aa28.45■■■□□ 2.14
MMP28-203ENST00000612672 ATG4CQ96DT6 458 aa28.45■■■□□ 2.14
MMP28-203ENST00000612672 DYNLL2Q96FJ2 89 aa28.45■■■□□ 2.14
MMP28-203ENST00000612672 IL1RAPL2Q9NP60 686 aa28.45■■■□□ 2.14
MMP28-203ENST00000612672 PRDM5Q9NQX1 630 aaPredicted RBP28.45■■■□□ 2.14
MMP28-203ENST00000612672 TRIM43BA6NCK2 446 aa28.44■■■□□ 2.14
MMP28-203ENST00000612672 FERMT2Q96AC1 680 aa28.44■■■□□ 2.14
MMP28-203ENST00000612672 TRIM43Q96BQ3 446 aaPredicted RBP28.44■■■□□ 2.14
MMP28-203ENST00000612672 CDX2Q99626 313 aaPredicted RBP28.44■■■□□ 2.14
MMP28-203ENST00000612672 DCP1AQ9NPI6 582 aaPredicted RBP28.44■■■□□ 2.14
MMP28-203ENST00000612672 PRKAG2Q9UGJ0 569 aa28.44■■■□□ 2.14
MMP28-203ENST00000612672 ZNF532Q9HCE3 1301 aa28.43■■■□□ 2.14
MMP28-203ENST00000612672 ITGB8P26012 769 aa28.43■■■□□ 2.14
MMP28-203ENST00000612672 DSG3P32926 999 aa28.43■■■□□ 2.14
MMP28-203ENST00000612672 ADCYAP1R1P41586 468 aa28.43■■■□□ 2.14
MMP28-203ENST00000612672 LRRC41Q15345 812 aa28.43■■■□□ 2.14
MMP28-203ENST00000612672 FTSJ3Q8IY81 847 aaKnown RBP28.43■■■□□ 2.14
MMP28-203ENST00000612672 SPICE1Q8N0Z3 855 aa28.43■■■□□ 2.14
MMP28-203ENST00000612672 ARRDC4Q8NCT1 418 aa28.43■■■□□ 2.14
MMP28-203ENST00000612672 TTYH1Q9H313 450 aaPredicted RBP28.43■■■□□ 2.14
MMP28-203ENST00000612672 KBTBD13C9JR72 458 aa28.42■■■□□ 2.14
MMP28-203ENST00000612672 STRNO43815 780 aa28.42■■■□□ 2.14
MMP28-203ENST00000612672 MYCNP04198 464 aaPredicted RBP28.42■■■□□ 2.14
MMP28-203ENST00000612672 AKR1B1P15121 316 aa28.42■■■□□ 2.14
MMP28-203ENST00000612672 SLC9C2Q5TAH2 1124 aa28.42■■■□□ 2.14
MMP28-203ENST00000612672 MAML3Q96JK9 1138 aa28.42■■■□□ 2.14
MMP28-203ENST00000612672 CRNKL1Q9BZJ0 848 aaKnown RBP28.42■■■□□ 2.14
MMP28-203ENST00000612672 HOXC10Q9NYD6 342 aa28.42■■■□□ 2.14
MMP28-203ENST00000612672 PLS1Q14651 629 aa28.41■■■□□ 2.14
MMP28-203ENST00000612672 TMED8Q6PL24 325 aaPredicted RBP28.41■■■□□ 2.14
MMP28-203ENST00000612672 SEMA6BQ9H3T3 888 aa28.41■■■□□ 2.14
MMP28-203ENST00000612672 MYH7P12883 1935 aa28.4■■■□□ 2.14
MMP28-203ENST00000612672 TTC28Q96AY4 2481 aa28.4■■■□□ 2.14
MMP28-203ENST00000612672 PRKAB2O43741 272 aa28.4■■■□□ 2.14
MMP28-203ENST00000612672 CHGBP05060 677 aa28.4■■■□□ 2.14
MMP28-203ENST00000612672 NCAPG2Q86XI2 1143 aa28.4■■■□□ 2.14
MMP28-203ENST00000612672 CYP2D7A0A087X1C5 515 aa28.39■■■□□ 2.14
MMP28-203ENST00000612672 FLOT1O75955 427 aa28.39■■■□□ 2.14
MMP28-203ENST00000612672 TMEM132BQ14DG7 1078 aa28.39■■■□□ 2.14
MMP28-203ENST00000612672 TMEM179Q6ZVK1 233 aa28.39■■■□□ 2.14
MMP28-203ENST00000612672 ARMT1Q9H993 441 aa28.39■■■□□ 2.14
MMP28-203ENST00000612672 GOLIM4O00461 696 aa28.38■■■□□ 2.13
MMP28-203ENST00000612672 EPHB4P54760 987 aa28.38■■■□□ 2.13
MMP28-203ENST00000612672 SAMD1Q6SPF0 538 aaPredicted RBP28.38■■■□□ 2.13
MMP28-203ENST00000612672 RHPN1Q8TCX5 695 aa28.38■■■□□ 2.13
MMP28-203ENST00000612672 MYLIPQ8WY64 445 aa28.38■■■□□ 2.13
MMP28-203ENST00000612672 MROH8Q9H579 483 aa28.38■■■□□ 2.13
MMP28-203ENST00000612672 TMX2Q9Y320 296 aa28.38■■■□□ 2.13
MMP28-203ENST00000612672 GREB1LQ9C091 1923 aaPredicted RBP28.37■■■□□ 2.13
MMP28-203ENST00000612672 TAL1P17542 331 aaPredicted RBP28.37■■■□□ 2.13
MMP28-203ENST00000612672 TLE2Q04725 743 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms