RNA–Protein interactions for RNA: ENST00000610705.1

AP004609.3-201, humanhuman

BASIC

Gene AP004609.3, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.3-201ENST00000610705 METTL16Q86W50 562 aaKnown RBP28.55■■■□□ 2.16
AP004609.3-201ENST00000610705 ZNF396Q96N95 335 aaPredicted RBP28.55■■■□□ 2.16
AP004609.3-201ENST00000610705 PPP4R3BQ5MIZ7 849 aa28.54■■■□□ 2.16
AP004609.3-201ENST00000610705 SPATA32Q96LK8 384 aa28.54■■■□□ 2.16
AP004609.3-201ENST00000610705 CNOT7Q9UIV1 285 aaKnown RBP28.54■■■□□ 2.16
AP004609.3-201ENST00000610705 KIF28PB7ZC32 967 aa28.53■■■□□ 2.16
AP004609.3-201ENST00000610705 XBP1P17861 261 aa28.53■■■□□ 2.16
AP004609.3-201ENST00000610705 PKN1Q16512 942 aa28.53■■■□□ 2.16
AP004609.3-201ENST00000610705 TPRNQ4KMQ1 711 aa28.53■■■□□ 2.16
AP004609.3-201ENST00000610705 LRRC47Q8N1G4 583 aaKnown RBP28.53■■■□□ 2.16
AP004609.3-201ENST00000610705 PARP1P09874 1014 aaKnown RBP28.53■■■□□ 2.16
AP004609.3-201ENST00000610705 ATP2B2Q01814 1243 aa28.53■■■□□ 2.16
AP004609.3-201ENST00000610705 SAFBQ15424 915 aaKnown RBP eCLIP28.53■■■□□ 2.16
AP004609.3-201ENST00000610705 FAM83AQ86UY5 434 aa28.53■■■□□ 2.16
AP004609.3-201ENST00000610705 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.53■■■□□ 2.16
AP004609.3-201ENST00000610705 HERC5Q9UII4 1024 aaKnown RBP28.53■■■□□ 2.16
AP004609.3-201ENST00000610705 PIBF1Q8WXW3 757 aa28.52■■■□□ 2.16
AP004609.3-201ENST00000610705 KCNJ14Q9UNX9 436 aa28.52■■■□□ 2.16
AP004609.3-201ENST00000610705 MYH6P13533 1939 aa28.52■■■□□ 2.16
AP004609.3-201ENST00000610705 PALM3A6NDB9 673 aaPredicted RBP28.51■■■□□ 2.15
AP004609.3-201ENST00000610705 MMP1P03956 469 aa28.51■■■□□ 2.15
AP004609.3-201ENST00000610705 GOLGA8HP0CJ92 632 aa28.51■■■□□ 2.15
AP004609.3-201ENST00000610705 UBE2HP62256 183 aa28.51■■■□□ 2.15
AP004609.3-201ENST00000610705 CEBPZQ03701 1054 aaKnown RBP28.51■■■□□ 2.15
AP004609.3-201ENST00000610705 GSE1Q14687 1217 aa28.51■■■□□ 2.15
AP004609.3-201ENST00000610705 ATL3Q6DD88 541 aa28.51■■■□□ 2.15
AP004609.3-201ENST00000610705 LZTS2Q9BRK4 669 aa28.51■■■□□ 2.15
AP004609.3-201ENST00000610705 TMEM39BQ9GZU3 492 aa28.51■■■□□ 2.15
AP004609.3-201ENST00000610705 MYH15Q9Y2K3 1946 aa28.51■■■□□ 2.15
AP004609.3-201ENST00000610705 GDF11O95390 407 aa28.51■■■□□ 2.15
AP004609.3-201ENST00000610705 EGFRP00533 1210 aa28.51■■■□□ 2.15
AP004609.3-201ENST00000610705 TNNI2P48788 182 aa28.51■■■□□ 2.15
AP004609.3-201ENST00000610705 ABCB5Q2M3G0 1257 aa28.51■■■□□ 2.15
AP004609.3-201ENST00000610705 RASGRP2Q7LDG7 609 aa28.51■■■□□ 2.15
AP004609.3-201ENST00000610705 SAMD7Q7Z3H4 446 aa28.51■■■□□ 2.15
AP004609.3-201ENST00000610705 LEO1Q8WVC0 666 aaPredicted RBP28.51■■■□□ 2.15
AP004609.3-201ENST00000610705 VPS54Q9P1Q0 977 aa28.51■■■□□ 2.15
AP004609.3-201ENST00000610705 RBM27Q9P2N5 1060 aaKnown RBP28.51■■■□□ 2.15
AP004609.3-201ENST00000610705 GREB1LQ9C091 1923 aaPredicted RBP28.5■■■□□ 2.15
AP004609.3-201ENST00000610705 TBC1D10BQ4KMP7 808 aaPredicted RBP28.5■■■□□ 2.15
AP004609.3-201ENST00000610705 CAVIN1Q6NZI2 390 aaKnown RBP28.5■■■□□ 2.15
AP004609.3-201ENST00000610705 USP17L2Q6R6M4 530 aa28.5■■■□□ 2.15
AP004609.3-201ENST00000610705 ELP1O95163 1332 aa28.5■■■□□ 2.15
AP004609.3-201ENST00000610705 KLRF2D3W0D1 207 aa28.49■■■□□ 2.15
AP004609.3-201ENST00000610705 SHROOM1Q2M3G4 852 aaPredicted RBP28.49■■■□□ 2.15
AP004609.3-201ENST00000610705 TMEM179Q6ZVK1 233 aa28.49■■■□□ 2.15
AP004609.3-201ENST00000610705 USP28Q96RU2 1077 aa28.49■■■□□ 2.15
AP004609.3-201ENST00000610705 KANSL2Q9H9L4 492 aa28.49■■■□□ 2.15
AP004609.3-201ENST00000610705 USP17L5A8MUK1 530 aa28.49■■■□□ 2.15
AP004609.3-201ENST00000610705 MYSM1Q5VVJ2 828 aa28.49■■■□□ 2.15
AP004609.3-201ENST00000610705 SCG2P13521 617 aa28.48■■■□□ 2.15
AP004609.3-201ENST00000610705 KIF4BQ2VIQ3 1234 aa28.48■■■□□ 2.15
AP004609.3-201ENST00000610705 DIS3L2Q8IYB7 885 aaKnown RBP28.48■■■□□ 2.15
AP004609.3-201ENST00000610705 FTOQ9C0B1 505 aaKnown RBP eCLIP28.48■■■□□ 2.15
AP004609.3-201ENST00000610705 CABP5Q9NP86 173 aa28.48■■■□□ 2.15
AP004609.3-201ENST00000610705 H7C1D1 291 aa28.47■■■□□ 2.15
AP004609.3-201ENST00000610705 PDHBP11177 359 aa28.47■■■□□ 2.15
AP004609.3-201ENST00000610705 SEPT2Q15019 361 aa28.47■■■□□ 2.15
AP004609.3-201ENST00000610705 PFKFB3Q16875 520 aaPredicted RBP28.47■■■□□ 2.15
AP004609.3-201ENST00000610705 U2AF2P26368 475 aaKnown RBP eCLIP28.46■■■□□ 2.15
AP004609.3-201ENST00000610705 TNFAIP1Q13829 316 aa28.46■■■□□ 2.15
AP004609.3-201ENST00000610705 BTBD18B2RXH4 712 aa28.46■■■□□ 2.15
AP004609.3-201ENST00000610705 EEF2P13639 858 aaKnown RBP28.46■■■□□ 2.15
AP004609.3-201ENST00000610705 ICA1Q05084 483 aa28.46■■■□□ 2.15
AP004609.3-201ENST00000610705 CDAN1Q8IWY9 1227 aa28.46■■■□□ 2.15
AP004609.3-201ENST00000610705 NYAP2Q9P242 653 aa28.46■■■□□ 2.15
AP004609.3-201ENST00000610705 SCAF8Q9UPN6 1271 aaKnown RBP28.46■■■□□ 2.15
AP004609.3-201ENST00000610705 FRMPD2Q68DX3 1309 aaPredicted RBP28.46■■■□□ 2.15
AP004609.3-201ENST00000610705 GOLGA6L4A6NEF3 574 aa28.45■■■□□ 2.15
AP004609.3-201ENST00000610705 GH2P01242 217 aa28.45■■■□□ 2.15
AP004609.3-201ENST00000610705 RASA3Q14644 834 aa28.45■■■□□ 2.15
AP004609.3-201ENST00000610705 ASPRV1Q53RT3 343 aa28.45■■■□□ 2.15
AP004609.3-201ENST00000610705 GPC2Q8N158 579 aa28.45■■■□□ 2.15
AP004609.3-201ENST00000610705 DICER1Q9UPY3 1922 aaKnown RBP28.45■■■□□ 2.15
AP004609.3-201ENST00000610705 CYTH3O43739 400 aa28.44■■■□□ 2.14
AP004609.3-201ENST00000610705 YBX3P16989 372 aaKnown RBP eCLIP28.44■■■□□ 2.14
AP004609.3-201ENST00000610705 SHISA4Q96DD7 197 aa28.44■■■□□ 2.14
AP004609.3-201ENST00000610705 PHF20Q9BVI0 1012 aa28.44■■■□□ 2.14
AP004609.3-201ENST00000610705 SPZ1Q9BXG8 430 aa28.44■■■□□ 2.14
AP004609.3-201ENST00000610705 FOXP1Q9H334 677 aaPredicted RBP28.44■■■□□ 2.14
AP004609.3-201ENST00000610705 CPVLQ9H3G5 476 aa28.44■■■□□ 2.14
AP004609.3-201ENST00000610705 RRP1BQ14684 758 aaKnown RBP28.44■■■□□ 2.14
AP004609.3-201ENST00000610705 SLC35G1Q2M3R5 365 aa28.44■■■□□ 2.14
AP004609.3-201ENST00000610705 NOSTRINQ8IVI9 506 aa28.44■■■□□ 2.14
AP004609.3-201ENST00000610705 RCOR1Q9UKL0 485 aa28.44■■■□□ 2.14
AP004609.3-201ENST00000610705 SNHG28P0DPA3 235 aa28.43■■■□□ 2.14
AP004609.3-201ENST00000610705 MIGA2Q7L4E1 593 aa28.43■■■□□ 2.14
AP004609.3-201ENST00000610705 RTEL1Q9NZ71 1219 aa28.43■■■□□ 2.14
AP004609.3-201ENST00000610705 RNF181Q9P0P0 153 aa28.43■■■□□ 2.14
AP004609.3-201ENST00000610705 HACL1Q9UJ83 578 aa28.43■■■□□ 2.14
AP004609.3-201ENST00000610705 ASTN2O75129 1339 aaPredicted RBP28.42■■■□□ 2.14
AP004609.3-201ENST00000610705 MYH4Q9Y623 1939 aa28.42■■■□□ 2.14
AP004609.3-201ENST00000610705 RAD21O60216 631 aa28.42■■■□□ 2.14
AP004609.3-201ENST00000610705 TBC1D12O60347 775 aa28.42■■■□□ 2.14
AP004609.3-201ENST00000610705 MKL1Q969V6 931 aa28.42■■■□□ 2.14
AP004609.3-201ENST00000610705 BRMS1Q9HCU9 246 aa28.42■■■□□ 2.14
AP004609.3-201ENST00000610705 GPRC5DQ9NZD1 345 aa28.42■■■□□ 2.14
AP004609.3-201ENST00000610705 SBF1O95248 1867 aa28.42■■■□□ 2.14
AP004609.3-201ENST00000610705 SMARCA1P28370 1054 aa28.42■■■□□ 2.14
AP004609.3-201ENST00000610705 KRT2P35908 639 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms