RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 CYP2D7A0A087X1C5 515 aa18.95■□□□□ 0.62
SMG9-208ENST00000598886 EVI5O60447 810 aa18.95■□□□□ 0.62
SMG9-208ENST00000598886 GRB14Q14449 540 aa18.95■□□□□ 0.62
SMG9-208ENST00000598886 UBE3CQ15386 1083 aa18.95■□□□□ 0.62
SMG9-208ENST00000598886 ATP8A2Q9NTI2 1148 aa18.95■□□□□ 0.62
SMG9-208ENST00000598886 SWAP70Q9UH65 585 aa18.95■□□□□ 0.62
SMG9-208ENST00000598886 PLXNA1Q9UIW2 1896 aa18.94■□□□□ 0.62
SMG9-208ENST00000598886 SLC15A5A6NIM6 579 aa18.94■□□□□ 0.62
SMG9-208ENST00000598886 SMARCA5O60264 1052 aaPredicted RBP18.94■□□□□ 0.62
SMG9-208ENST00000598886 AKR1B1P15121 316 aa18.94■□□□□ 0.62
SMG9-208ENST00000598886 PTPREP23469 700 aa18.94■□□□□ 0.62
SMG9-208ENST00000598886 C12orf60Q5U649 245 aa18.94■□□□□ 0.62
SMG9-208ENST00000598886 TMEM179Q6ZVK1 233 aa18.94■□□□□ 0.62
SMG9-208ENST00000598886 NBPF3Q9H094 633 aa18.94■□□□□ 0.62
SMG9-208ENST00000598886 LRRCC1Q9C099 1032 aa18.93■□□□□ 0.62
SMG9-208ENST00000598886 PUS7LQ9H0K6 701 aaKnown RBP18.93■□□□□ 0.62
SMG9-208ENST00000598886 CHMP4BQ9H444 224 aaKnown RBP18.93■□□□□ 0.62
SMG9-208ENST00000598886 TMX2Q9Y320 296 aa18.93■□□□□ 0.62
SMG9-208ENST00000598886 LTBP2Q14767 1821 aa18.93■□□□□ 0.62
SMG9-208ENST00000598886 A0A1W2PPC1 479 aa18.92■□□□□ 0.62
SMG9-208ENST00000598886 CCNA1P78396 465 aa18.92■□□□□ 0.62
SMG9-208ENST00000598886 C16orf86Q6ZW13 317 aa18.92■□□□□ 0.62
SMG9-208ENST00000598886 NPLOC4Q8TAT6 608 aa18.92■□□□□ 0.62
SMG9-208ENST00000598886 GDF15Q99988 308 aa18.92■□□□□ 0.62
SMG9-208ENST00000598886 C11orf49Q9H6J7 331 aa18.92■□□□□ 0.62
SMG9-208ENST00000598886 MYH4Q9Y623 1939 aa18.92■□□□□ 0.62
SMG9-208ENST00000598886 USP17L12C9JPN9 530 aa18.91■□□□□ 0.62
SMG9-208ENST00000598886 USP17L21D6R901 530 aa18.91■□□□□ 0.62
SMG9-208ENST00000598886 CDK8P49336 464 aa18.91■□□□□ 0.62
SMG9-208ENST00000598886 COG2Q14746 738 aa18.91■□□□□ 0.62
SMG9-208ENST00000598886 TRPV1Q8NER1 839 aa18.91■□□□□ 0.62
SMG9-208ENST00000598886 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.91■□□□□ 0.62
SMG9-208ENST00000598886 MOV10L1Q9BXT6 1211 aaKnown RBP18.91■□□□□ 0.62
SMG9-208ENST00000598886 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.91■□□□□ 0.624e-7■■■■■ 27.4
SMG9-208ENST00000598886 ROBO3Q96MS0 1386 aa18.91■□□□□ 0.62
SMG9-208ENST00000598886 MPHOSPH10O00566 681 aaKnown RBP18.9■□□□□ 0.62
SMG9-208ENST00000598886 SOX1O00570 391 aaPredicted RBP18.9■□□□□ 0.62
SMG9-208ENST00000598886 CTR9Q6PD62 1173 aa18.9■□□□□ 0.62
SMG9-208ENST00000598886 C7orf61Q8IZ16 206 aa18.9■□□□□ 0.62
SMG9-208ENST00000598886 LPAR1Q92633 364 aa18.9■□□□□ 0.62
SMG9-208ENST00000598886 BCL11AQ9H165 835 aa18.9■□□□□ 0.62
SMG9-208ENST00000598886 DCTPP1Q9H773 170 aa18.9■□□□□ 0.62
SMG9-208ENST00000598886 VCPKMTQ9H867 229 aa18.9■□□□□ 0.62
SMG9-208ENST00000598886 STAP2Q9UGK3 403 aa18.9■□□□□ 0.62
SMG9-208ENST00000598886 GLRX3O76003 335 aaKnown RBP18.89■□□□□ 0.61
SMG9-208ENST00000598886 DSG3P32926 999 aa18.89■□□□□ 0.61
SMG9-208ENST00000598886 BMP8BP34820 402 aa18.89■□□□□ 0.61
SMG9-208ENST00000598886 ICA1Q05084 483 aa18.89■□□□□ 0.61
SMG9-208ENST00000598886 CCAR1Q8IX12 1150 aaKnown RBP18.89■□□□□ 0.61
SMG9-208ENST00000598886 SHCBP1Q8NEM2 672 aa18.89■□□□□ 0.61
SMG9-208ENST00000598886 CCDC17Q96LX7 622 aa18.89■□□□□ 0.61
SMG9-208ENST00000598886 TANGO6Q9C0B7 1094 aa18.89■□□□□ 0.61
SMG9-208ENST00000598886 SPATC1LQ9H0A9 340 aa18.89■□□□□ 0.61
SMG9-208ENST00000598886 ECHDC1Q9NTX5 307 aa18.89■□□□□ 0.61
SMG9-208ENST00000598886 ADAMTS5Q9UNA0 930 aa18.89■□□□□ 0.61
SMG9-208ENST00000598886 CYBAP13498 195 aa18.88■□□□□ 0.61
SMG9-208ENST00000598886 STRBPQ96SI9 672 aaKnown RBP18.88■□□□□ 0.61
SMG9-208ENST00000598886 HOXC10Q9NYD6 342 aa18.88■□□□□ 0.61
SMG9-208ENST00000598886 SLC4A4Q9Y6R1 1079 aa18.88■□□□□ 0.61
SMG9-208ENST00000598886 SPICE1Q8N0Z3 855 aa18.87■□□□□ 0.61
SMG9-208ENST00000598886 KBTBD3Q8NAB2 608 aa18.87■□□□□ 0.61
SMG9-208ENST00000598886 ATG4CQ96DT6 458 aa18.87■□□□□ 0.61
SMG9-208ENST00000598886 ARHGEF10LQ9HCE6 1279 aa18.87■□□□□ 0.61
SMG9-208ENST00000598886 ZMYND8Q9ULU4 1186 aaPredicted RBP18.87■□□□□ 0.61
SMG9-208ENST00000598886 GSG1L2A8MUP6 293 aa18.86■□□□□ 0.61
SMG9-208ENST00000598886 WDR46O15213 610 aaKnown RBP18.86■□□□□ 0.61
SMG9-208ENST00000598886 COBLO75128 1261 aa18.86■□□□□ 0.61
SMG9-208ENST00000598886 EEF2P13639 858 aaKnown RBP18.86■□□□□ 0.61
SMG9-208ENST00000598886 ERCC3P19447 782 aa18.86■□□□□ 0.61
SMG9-208ENST00000598886 ADORA2AP29274 412 aa18.86■□□□□ 0.61
SMG9-208ENST00000598886 CYP2C19P33261 490 aa18.86■□□□□ 0.61
SMG9-208ENST00000598886 LRRC26Q2I0M4 334 aa18.86■□□□□ 0.61
SMG9-208ENST00000598886 SBK1Q52WX2 424 aa18.86■□□□□ 0.61
SMG9-208ENST00000598886 WDR78Q5VTH9 848 aa18.86■□□□□ 0.61
SMG9-208ENST00000598886 TSHZ3Q63HK5 1081 aa18.86■□□□□ 0.61
SMG9-208ENST00000598886 OLFML2BQ68BL8 750 aa18.86■□□□□ 0.61
SMG9-208ENST00000598886 MB21D1Q8N884 522 aa18.86■□□□□ 0.61
SMG9-208ENST00000598886 OSBP2Q969R2 916 aa18.86■□□□□ 0.61
SMG9-208ENST00000598886 EPB41L4AQ9HCS5 686 aaPredicted RBP18.86■□□□□ 0.61
SMG9-208ENST00000598886 DDX20Q9UHI6 824 aaKnown RBP18.86■□□□□ 0.61
SMG9-208ENST00000598886 COL6A3P12111 3177 aa18.86■□□□□ 0.61
SMG9-208ENST00000598886 STRNO43815 780 aa18.85■□□□□ 0.61
SMG9-208ENST00000598886 RASA1P20936 1047 aa18.85■□□□□ 0.61
SMG9-208ENST00000598886 TMEM132BQ14DG7 1078 aa18.85■□□□□ 0.61
SMG9-208ENST00000598886 MFSD14CQ5VZR4 134 aa18.85■□□□□ 0.61
SMG9-208ENST00000598886 ZSCAN25Q6NSZ9 544 aa18.85■□□□□ 0.61
SMG9-208ENST00000598886 REPS2Q8NFH8 660 aa18.85■□□□□ 0.61
SMG9-208ENST00000598886 FBXO28Q9NVF7 368 aa18.85■□□□□ 0.61
SMG9-208ENST00000598886 ARPP21Q9UBL0 812 aaPredicted RBP18.85■□□□□ 0.61
SMG9-208ENST00000598886 IVNS1ABPQ9Y6Y0 642 aa18.85■□□□□ 0.61
SMG9-208ENST00000598886 FLOT1O75955 427 aa18.84■□□□□ 0.61
SMG9-208ENST00000598886 SYN1P17600 705 aa18.84■□□□□ 0.61
SMG9-208ENST00000598886 GIMAP6Q6P9H5 292 aa18.84■□□□□ 0.61
SMG9-208ENST00000598886 ABRAQ8N0Z2 381 aa18.84■□□□□ 0.61
SMG9-208ENST00000598886 LRCH3Q96II8 777 aa18.84■□□□□ 0.61
SMG9-208ENST00000598886 SH2D4AQ9H788 454 aa18.84■□□□□ 0.61
SMG9-208ENST00000598886 KANSL2Q9H9L4 492 aa18.84■□□□□ 0.61
SMG9-208ENST00000598886 CWC22Q9HCG8 908 aaKnown RBP18.84■□□□□ 0.61
SMG9-208ENST00000598886 SMCHD1A6NHR9 2005 aa18.83■□□□□ 0.61
SMG9-208ENST00000598886 IGKV6D-41A0A0C4DH26 115 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms