RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 HOXC10Q9NYD6 342 aa27.35■■□□□ 1.97
SSBP4-203ENST00000593641 A0A1W2PRG0 241 aa27.34■■□□□ 1.97
SSBP4-203ENST00000593641 HOXC6P09630 235 aa27.34■■□□□ 1.97
SSBP4-203ENST00000593641 CYP2D6P10635 497 aa27.34■■□□□ 1.97
SSBP4-203ENST00000593641 COL6A1P12109 1028 aa27.34■■□□□ 1.97
SSBP4-203ENST00000593641 AMOTL1Q8IY63 956 aa27.34■■□□□ 1.97
SSBP4-203ENST00000593641 SLC44A5Q8NCS7 719 aa27.34■■□□□ 1.97
SSBP4-203ENST00000593641 FLRT1Q9NZU1 646 aa27.34■■□□□ 1.97
SSBP4-203ENST00000593641 RLFQ13129 1914 aa27.33■■□□□ 1.97
SSBP4-203ENST00000593641 A0A0G2JMZ2 1700 aa27.33■■□□□ 1.97
SSBP4-203ENST00000593641 ZNF236Q9UL36 1845 aa27.33■■□□□ 1.97
SSBP4-203ENST00000593641 SOX1O00570 391 aaPredicted RBP27.33■■□□□ 1.97
SSBP4-203ENST00000593641 MBD4O95243 580 aa27.33■■□□□ 1.97
SSBP4-203ENST00000593641 ADD2P35612 726 aa27.33■■□□□ 1.97
SSBP4-203ENST00000593641 ARHGEF10LQ9HCE6 1279 aa27.33■■□□□ 1.97
SSBP4-203ENST00000593641 ATP8A2Q9NTI2 1148 aa27.33■■□□□ 1.97
SSBP4-203ENST00000593641 MSCO60682 206 aa27.32■■□□□ 1.96
SSBP4-203ENST00000593641 ATP5JP18859 108 aa27.32■■□□□ 1.96
SSBP4-203ENST00000593641 CNGA1P29973 690 aa27.32■■□□□ 1.96
SSBP4-203ENST00000593641 MAGEA10P43363 369 aaPredicted RBP27.32■■□□□ 1.96
SSBP4-203ENST00000593641 LPAR1Q92633 364 aa27.32■■□□□ 1.96
SSBP4-203ENST00000593641 DDRGK1Q96HY6 314 aa27.32■■□□□ 1.96
SSBP4-203ENST00000593641 LRCH3Q96II8 777 aa27.32■■□□□ 1.96
SSBP4-203ENST00000593641 SH2D4AQ9H788 454 aa27.32■■□□□ 1.96
SSBP4-203ENST00000593641 ICA1Q05084 483 aa27.31■■□□□ 1.96
SSBP4-203ENST00000593641 DPP9Q86TI2 863 aa27.31■■□□□ 1.96
SSBP4-203ENST00000593641 NPLOC4Q8TAT6 608 aa27.31■■□□□ 1.96
SSBP4-203ENST00000593641 DYNLL2Q96FJ2 89 aa27.31■■□□□ 1.96
SSBP4-203ENST00000593641 DDX20Q9UHI6 824 aaKnown RBP27.31■■□□□ 1.96
SSBP4-203ENST00000593641 MB21D1Q8N884 522 aa27.3■■□□□ 1.96
SSBP4-203ENST00000593641 HAUS7Q99871 368 aa27.3■■□□□ 1.96
SSBP4-203ENST00000593641 MOV10L1Q9BXT6 1211 aaKnown RBP27.3■■□□□ 1.96
SSBP4-203ENST00000593641 SPATC1LQ9H0A9 340 aa27.3■■□□□ 1.96
SSBP4-203ENST00000593641 PRKAB2O43741 272 aa27.29■■□□□ 1.96
SSBP4-203ENST00000593641 STRNO43815 780 aa27.29■■□□□ 1.96
SSBP4-203ENST00000593641 AKR1B1P15121 316 aa27.29■■□□□ 1.96
SSBP4-203ENST00000593641 SHCBP1Q8NEM2 672 aa27.29■■□□□ 1.96
SSBP4-203ENST00000593641 PARP14Q460N5 1801 aa27.29■■□□□ 1.96
SSBP4-203ENST00000593641 DNAH12Q6ZR08 3092 aa27.29■■□□□ 1.96
SSBP4-203ENST00000593641 FLOT1O75955 427 aa27.28■■□□□ 1.96
SSBP4-203ENST00000593641 ADORA2AP29274 412 aa27.28■■□□□ 1.96
SSBP4-203ENST00000593641 CYP2C19P33261 490 aa27.28■■□□□ 1.96
SSBP4-203ENST00000593641 LRRC26Q2I0M4 334 aa27.28■■□□□ 1.96
SSBP4-203ENST00000593641 SLFNL1Q499Z3 407 aa27.28■■□□□ 1.96
SSBP4-203ENST00000593641 TDHQ8IZJ6 230 aa27.28■■□□□ 1.96
SSBP4-203ENST00000593641 CCDC17Q96LX7 622 aa27.28■■□□□ 1.96
SSBP4-203ENST00000593641 UBE2OQ9C0C9 1292 aaKnown RBP27.28■■□□□ 1.96
SSBP4-203ENST00000593641 ERCC3P19447 782 aa27.27■■□□□ 1.96
SSBP4-203ENST00000593641 PLS1Q14651 629 aa27.27■■□□□ 1.96
SSBP4-203ENST00000593641 UBE3CQ15386 1083 aa27.27■■□□□ 1.96
SSBP4-203ENST00000593641 CLEC10AQ8IUN9 316 aa27.27■■□□□ 1.96
SSBP4-203ENST00000593641 SPICE1Q8N0Z3 855 aa27.27■■□□□ 1.96
SSBP4-203ENST00000593641 LRRCC1Q9C099 1032 aa27.27■■□□□ 1.96
SSBP4-203ENST00000593641 SENP6Q9GZR1 1112 aaPredicted RBP27.27■■□□□ 1.96
SSBP4-203ENST00000593641 VCPKMTQ9H867 229 aa27.27■■□□□ 1.96
SSBP4-203ENST00000593641 SLC5A4Q9NY91 659 aa27.27■■□□□ 1.96
SSBP4-203ENST00000593641 RCAN3Q9UKA8 241 aa27.27■■□□□ 1.96
SSBP4-203ENST00000593641 TMX2Q9Y320 296 aa27.27■■□□□ 1.96
SSBP4-203ENST00000593641 ZNFX1Q9P2E3 1918 aaKnown RBP27.27■■□□□ 1.96
SSBP4-203ENST00000593641 COL11A1P12107 1806 aaPredicted RBP27.26■■□□□ 1.95
SSBP4-203ENST00000593641 DSG3P32926 999 aa27.26■■□□□ 1.95
SSBP4-203ENST00000593641 KIAA1755Q5JYT7 1200 aa27.26■■□□□ 1.95
SSBP4-203ENST00000593641 C12orf60Q5U649 245 aa27.26■■□□□ 1.95
SSBP4-203ENST00000593641 ZSCAN25Q6NSZ9 544 aa27.26■■□□□ 1.95
SSBP4-203ENST00000593641 USP17L12C9JPN9 530 aa27.25■■□□□ 1.95
SSBP4-203ENST00000593641 USP17L21D6R901 530 aa27.25■■□□□ 1.95
SSBP4-203ENST00000593641 WDR46O15213 610 aaKnown RBP27.25■■□□□ 1.95
SSBP4-203ENST00000593641 CDK8P49336 464 aa27.25■■□□□ 1.95
SSBP4-203ENST00000593641 OLFML2BQ68BL8 750 aa27.25■■□□□ 1.95
SSBP4-203ENST00000593641 MROH8Q9H579 483 aa27.25■■□□□ 1.95
SSBP4-203ENST00000593641 SLC4A4Q9Y6R1 1079 aa27.25■■□□□ 1.95
SSBP4-203ENST00000593641 COL6A3P12111 3177 aa27.25■■□□□ 1.95
SSBP4-203ENST00000593641 CYP2D7A0A087X1C5 515 aa27.24■■□□□ 1.95
SSBP4-203ENST00000593641 DNM1LO00429 736 aa27.24■■□□□ 1.95
SSBP4-203ENST00000593641 CYBAP13498 195 aa27.24■■□□□ 1.95
SSBP4-203ENST00000593641 LRIT3Q3SXY7 679 aa27.24■■□□□ 1.95
SSBP4-203ENST00000593641 GPR153Q6NV75 609 aa27.24■■□□□ 1.95
SSBP4-203ENST00000593641 SAMD1Q6SPF0 538 aaPredicted RBP27.24■■□□□ 1.95
SSBP4-203ENST00000593641 C16orf86Q6ZW13 317 aa27.24■■□□□ 1.95
SSBP4-203ENST00000593641 NCAPG2Q86XI2 1143 aa27.24■■□□□ 1.95
SSBP4-203ENST00000593641 ATG4CQ96DT6 458 aa27.24■■□□□ 1.95
SSBP4-203ENST00000593641 SIAH1Q8IUQ4 282 aa27.23■■□□□ 1.95
SSBP4-203ENST00000593641 TRPV1Q8NER1 839 aa27.23■■□□□ 1.95
SSBP4-203ENST00000593641 CHGBP05060 677 aa27.22■■□□□ 1.95
SSBP4-203ENST00000593641 ABRAQ8N0Z2 381 aa27.22■■□□□ 1.95
SSBP4-203ENST00000593641 IGHA2P01877 340 aa27.21■■□□□ 1.95
SSBP4-203ENST00000593641 MDM2Q00987 491 aaPredicted RBP27.21■■□□□ 1.95
SSBP4-203ENST00000593641 KANSL2Q9H9L4 492 aa27.21■■□□□ 1.95
SSBP4-203ENST00000593641 ARPP21Q9UBL0 812 aaPredicted RBP27.21■■□□□ 1.95
SSBP4-203ENST00000593641 SMIM22K7EJ46 135 aa27.2■■□□□ 1.94
SSBP4-203ENST00000593641 COBLO75128 1261 aa27.2■■□□□ 1.94
SSBP4-203ENST00000593641 EEF2P13639 858 aaKnown RBP27.2■■□□□ 1.94
SSBP4-203ENST00000593641 ATN1P54259 1190 aaPredicted RBP27.2■■□□□ 1.94
SSBP4-203ENST00000593641 ARRDC4Q8NCT1 418 aa27.2■■□□□ 1.94
SSBP4-203ENST00000593641 PUS7LQ9H0K6 701 aaKnown RBP27.2■■□□□ 1.94
SSBP4-203ENST00000593641 GOPCQ9HD26 462 aa27.2■■□□□ 1.94
SSBP4-203ENST00000593641 PLXNA1Q9UIW2 1896 aa27.19■■□□□ 1.94
SSBP4-203ENST00000593641 KBTBD13C9JR72 458 aa27.19■■□□□ 1.94
SSBP4-203ENST00000593641 SMARCA5O60264 1052 aaPredicted RBP27.19■■□□□ 1.94
SSBP4-203ENST00000593641 SLC25A27O95847 323 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms