RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 GUCY1B3Q02153 619 aa13.98□□□□□ -0.17
CCBE1-203ENST00000589116 KRT40Q6A162 431 aa13.98□□□□□ -0.17
CCBE1-203ENST00000589116 SH3BP5LQ7L8J4 393 aa13.98□□□□□ -0.17
CCBE1-203ENST00000589116 USP48Q86UV5 1035 aa13.98□□□□□ -0.17
CCBE1-203ENST00000589116 FAM151AQ8WW52 585 aa13.98□□□□□ -0.17
CCBE1-203ENST00000589116 CNTNAP5Q8WYK1 1306 aa13.98□□□□□ -0.17
CCBE1-203ENST00000589116 DPF2Q92785 391 aa13.98□□□□□ -0.17
CCBE1-203ENST00000589116 ZNF396Q96N95 335 aaPredicted RBP13.98□□□□□ -0.17
CCBE1-203ENST00000589116 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.98□□□□□ -0.17
CCBE1-203ENST00000589116 MTMR4Q9NYA4 1195 aa13.98□□□□□ -0.17
CCBE1-203ENST00000589116 AKR1B1P15121 316 aa13.97□□□□□ -0.17
CCBE1-203ENST00000589116 XBP1P17861 261 aa13.97□□□□□ -0.17
CCBE1-203ENST00000589116 KIF23Q02241 960 aaPredicted RBP13.97□□□□□ -0.17
CCBE1-203ENST00000589116 TATDN1Q6P1N9 297 aa13.97□□□□□ -0.17
CCBE1-203ENST00000589116 FAM83AQ86UY5 434 aa13.97□□□□□ -0.17
CCBE1-203ENST00000589116 AIFM3Q96NN9 605 aa13.97□□□□□ -0.17
CCBE1-203ENST00000589116 LZTS2Q9BRK4 669 aa13.97□□□□□ -0.17
CCBE1-203ENST00000589116 DNAJC18Q9H819 358 aa13.97□□□□□ -0.17
CCBE1-203ENST00000589116 GDPD2Q9HCC8 539 aa13.97□□□□□ -0.17
CCBE1-203ENST00000589116 MYOZ2Q9NPC6 264 aa13.97□□□□□ -0.17
CCBE1-203ENST00000589116 HERC5Q9UII4 1024 aaKnown RBP13.97□□□□□ -0.17
CCBE1-203ENST00000589116 TTLL1O95922 423 aa13.96□□□□□ -0.17
CCBE1-203ENST00000589116 LBX1P52954 281 aa13.96□□□□□ -0.17
CCBE1-203ENST00000589116 UBE2HP62256 183 aa13.96□□□□□ -0.17
CCBE1-203ENST00000589116 MYH4Q9Y623 1939 aa13.96□□□□□ -0.18
CCBE1-203ENST00000589116 SBF1O95248 1867 aa13.95□□□□□ -0.18
CCBE1-203ENST00000589116 SAFBQ15424 915 aaKnown RBP eCLIP13.95□□□□□ -0.18
CCBE1-203ENST00000589116 OTUD7BQ6GQQ9 843 aa13.95□□□□□ -0.18
CCBE1-203ENST00000589116 FAM173BQ6P4H8 233 aa13.95□□□□□ -0.18
CCBE1-203ENST00000589116 CMTR1Q8N1G2 835 aaKnown RBP13.95□□□□□ -0.18
CCBE1-203ENST00000589116 CCDC82Q8N4S0 544 aa13.95□□□□□ -0.18
CCBE1-203ENST00000589116 SRBD1Q8N5C6 995 aaKnown RBP13.95□□□□□ -0.18
CCBE1-203ENST00000589116 CSRNP1Q96S65 589 aa13.95□□□□□ -0.18
CCBE1-203ENST00000589116 MAD2L2Q9UI95 211 aa13.95□□□□□ -0.18
CCBE1-203ENST00000589116 CNTNAP1P78357 1384 aa13.95□□□□□ -0.18
CCBE1-203ENST00000589116 CLRN2A0PK11 232 aa13.95□□□□□ -0.18
CCBE1-203ENST00000589116 PALM3A6NDB9 673 aaPredicted RBP13.95□□□□□ -0.18
CCBE1-203ENST00000589116 CCDC85CA6NKD9 419 aa13.95□□□□□ -0.18
CCBE1-203ENST00000589116 TCP10L2B9ZVM9 353 aa13.95□□□□□ -0.18
CCBE1-203ENST00000589116 WNT10BO00744 389 aa13.95□□□□□ -0.18
CCBE1-203ENST00000589116 MMP1P03956 469 aa13.95□□□□□ -0.18
CCBE1-203ENST00000589116 LMNB1P20700 586 aa13.95□□□□□ -0.18
CCBE1-203ENST00000589116 SMARCA1P28370 1054 aa13.95□□□□□ -0.18
CCBE1-203ENST00000589116 GUCY1A2P33402 732 aa13.95□□□□□ -0.18
CCBE1-203ENST00000589116 GSE1Q14687 1217 aa13.95□□□□□ -0.18
CCBE1-203ENST00000589116 PKN1Q16512 942 aa13.95□□□□□ -0.18
CCBE1-203ENST00000589116 CERKLQ49MI3 558 aaPredicted RBP13.95□□□□□ -0.18
CCBE1-203ENST00000589116 GPT2Q8TD30 523 aa13.95□□□□□ -0.18
CCBE1-203ENST00000589116 SPATA32Q96LK8 384 aa13.95□□□□□ -0.18
CCBE1-203ENST00000589116 PARP1P09874 1014 aaKnown RBP13.94□□□□□ -0.18
CCBE1-203ENST00000589116 U2AF2P26368 475 aaKnown RBP eCLIP13.94□□□□□ -0.18
CCBE1-203ENST00000589116 TNNI2P48788 182 aa13.94□□□□□ -0.18
CCBE1-203ENST00000589116 GMPSP49915 693 aaPredicted RBP13.94□□□□□ -0.18
CCBE1-203ENST00000589116 GNL2Q13823 731 aaKnown RBP13.94□□□□□ -0.18
CCBE1-203ENST00000589116 TNFAIP1Q13829 316 aa13.94□□□□□ -0.18
CCBE1-203ENST00000589116 TMEM179Q6ZVK1 233 aa13.94□□□□□ -0.18
CCBE1-203ENST00000589116 FAM177A1Q8N128 213 aaPredicted RBP13.94□□□□□ -0.18
CCBE1-203ENST00000589116 LEO1Q8WVC0 666 aaPredicted RBP13.94□□□□□ -0.18
CCBE1-203ENST00000589116 SPZ1Q9BXG8 430 aa13.94□□□□□ -0.18
CCBE1-203ENST00000589116 VEZTQ9HBM0 779 aa13.94□□□□□ -0.18
CCBE1-203ENST00000589116 GJB4Q9NTQ9 266 aa13.94□□□□□ -0.18
CCBE1-203ENST00000589116 V9GY48 417 aaPredicted RBP13.94□□□□□ -0.18
CCBE1-203ENST00000589116 UBE2Q2LH0YL09 131 aa13.93□□□□□ -0.18
CCBE1-203ENST00000589116 MPHOSPH10O00566 681 aaKnown RBP13.93□□□□□ -0.18
CCBE1-203ENST00000589116 SNHG28P0DPA3 235 aa13.93□□□□□ -0.18
CCBE1-203ENST00000589116 PFKFB3Q16875 520 aaPredicted RBP13.93□□□□□ -0.18
CCBE1-203ENST00000589116 ASPRV1Q53RT3 343 aa13.93□□□□□ -0.18
CCBE1-203ENST00000589116 MYSM1Q5VVJ2 828 aa13.93□□□□□ -0.18
CCBE1-203ENST00000589116 SYAP1Q96A49 352 aaPredicted RBP13.93□□□□□ -0.18
CCBE1-203ENST00000589116 FOXP1Q9H334 677 aaPredicted RBP13.93□□□□□ -0.18
CCBE1-203ENST00000589116 KANSL2Q9H9L4 492 aa13.93□□□□□ -0.18
CCBE1-203ENST00000589116 NYAP2Q9P242 653 aa13.93□□□□□ -0.18
CCBE1-203ENST00000589116 KIF28PB7ZC32 967 aa13.92□□□□□ -0.18
CCBE1-203ENST00000589116 TBC1D12O60347 775 aa13.92□□□□□ -0.18
CCBE1-203ENST00000589116 GADD45BO75293 160 aaPredicted RBP13.92□□□□□ -0.18
CCBE1-203ENST00000589116 SCG2P13521 617 aa13.92□□□□□ -0.18
CCBE1-203ENST00000589116 MICALL2Q8IY33 904 aa13.92□□□□□ -0.18
CCBE1-203ENST00000589116 STAG2Q8N3U4 1231 aa13.92□□□□□ -0.18
CCBE1-203ENST00000589116 POLR3EQ9NVU0 708 aa13.92□□□□□ -0.18
CCBE1-203ENST00000589116 RTEL1Q9NZ71 1219 aa13.92□□□□□ -0.18
CCBE1-203ENST00000589116 TFIP11Q9UBB9 837 aaKnown RBP13.92□□□□□ -0.18
CCBE1-203ENST00000589116 RCOR1Q9UKL0 485 aa13.92□□□□□ -0.18
CCBE1-203ENST00000589116 SYNPO2Q9UMS6 1093 aa13.92□□□□□ -0.18
CCBE1-203ENST00000589116 GJA3Q9Y6H8 435 aa13.92□□□□□ -0.18
CCBE1-203ENST00000589116 ZNF541Q9H0D2 1346 aa13.92□□□□□ -0.18
CCBE1-203ENST00000589116 KLRF2D3W0D1 207 aa13.91□□□□□ -0.18
CCBE1-203ENST00000589116 PDHBP11177 359 aa13.91□□□□□ -0.18
CCBE1-203ENST00000589116 ABCB5Q2M3G0 1257 aa13.91□□□□□ -0.18
CCBE1-203ENST00000589116 NBPF9Q3BBW0 867 aa13.91□□□□□ -0.18
CCBE1-203ENST00000589116 CHADLQ6NUI6 762 aa13.91□□□□□ -0.18
CCBE1-203ENST00000589116 DIS3L2Q8IYB7 885 aaKnown RBP13.91□□□□□ -0.18
CCBE1-203ENST00000589116 MKL1Q969V6 931 aa13.91□□□□□ -0.18
CCBE1-203ENST00000589116 USP28Q96RU2 1077 aa13.91□□□□□ -0.18
CCBE1-203ENST00000589116 PHF20Q9BVI0 1012 aa13.91□□□□□ -0.18
CCBE1-203ENST00000589116 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.91□□□□□ -0.18
CCBE1-203ENST00000589116 BRMS1Q9HCU9 246 aa13.91□□□□□ -0.18
CCBE1-203ENST00000589116 SH3GLB2Q9NR46 395 aa13.91□□□□□ -0.18
CCBE1-203ENST00000589116 CLIP2Q9UDT6 1046 aa13.91□□□□□ -0.18
CCBE1-203ENST00000589116 CNOT7Q9UIV1 285 aaKnown RBP13.91□□□□□ -0.18
CCBE1-203ENST00000589116 FAM196BA6NMK8 535 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms