RNA–Protein interactions for RNA: ENST00000589017.5

PRKAR1A-216, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 3

Gene PRKAR1A, Length 1,116 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-216ENST00000589017 Q3C1V9 767 aa22.27■■□□□ 1.16
PRKAR1A-216ENST00000589017 B4GALNT3Q6L9W6 998 aa22.27■■□□□ 1.16
PRKAR1A-216ENST00000589017 NACAP1Q9BZK3 213 aa22.27■■□□□ 1.16
PRKAR1A-216ENST00000589017 VCPKMTQ9H867 229 aa22.27■■□□□ 1.16
PRKAR1A-216ENST00000589017 KANSL2Q9H9L4 492 aa22.27■■□□□ 1.16
PRKAR1A-216ENST00000589017 SPDYE16A6NNV3 312 aaPredicted RBP22.26■■□□□ 1.15
PRKAR1A-216ENST00000589017 EEF2P13639 858 aaKnown RBP22.26■■□□□ 1.15
PRKAR1A-216ENST00000589017 KIAA1755Q5JYT7 1200 aa22.26■■□□□ 1.15
PRKAR1A-216ENST00000589017 CHD1LQ86WJ1 897 aa22.26■■□□□ 1.15
PRKAR1A-216ENST00000589017 SOCS4Q8WXH5 440 aa22.26■■□□□ 1.15
PRKAR1A-216ENST00000589017 TANGO6Q9C0B7 1094 aa22.26■■□□□ 1.15
PRKAR1A-216ENST00000589017 PORCNQ9H237 461 aa22.26■■□□□ 1.15
PRKAR1A-216ENST00000589017 MKNK2Q9HBH9 465 aa22.26■■□□□ 1.15
PRKAR1A-216ENST00000589017 NUCB1Q02818 461 aa22.25■■□□□ 1.15
PRKAR1A-216ENST00000589017 TICAM2Q86XR7 235 aa22.25■■□□□ 1.15
PRKAR1A-216ENST00000589017 STK11IPQ8N1F8 1099 aa22.25■■□□□ 1.15
PRKAR1A-216ENST00000589017 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.25■■□□□ 1.15
PRKAR1A-216ENST00000589017 RNF208Q9H0X6 261 aa22.25■■□□□ 1.15
PRKAR1A-216ENST00000589017 GJB1P08034 283 aa22.24■■□□□ 1.15
PRKAR1A-216ENST00000589017 CCNA1P78396 465 aa22.24■■□□□ 1.15
PRKAR1A-216ENST00000589017 COG2Q14746 738 aa22.24■■□□□ 1.15
PRKAR1A-216ENST00000589017 CCAR1Q8IX12 1150 aaKnown RBP22.24■■□□□ 1.15
PRKAR1A-216ENST00000589017 NKX2-3Q8TAU0 364 aa22.24■■□□□ 1.15
PRKAR1A-216ENST00000589017 SHISA4Q96DD7 197 aa22.24■■□□□ 1.15
PRKAR1A-216ENST00000589017 NAPBQ9H115 298 aa22.24■■□□□ 1.15
PRKAR1A-216ENST00000589017 UNC93B1Q9H1C4 597 aa22.24■■□□□ 1.15
PRKAR1A-216ENST00000589017 ZNF287Q9HBT7 754 aa22.24■■□□□ 1.15
PRKAR1A-216ENST00000589017 BTBD7Q9P203 1132 aa22.24■■□□□ 1.15
PRKAR1A-216ENST00000589017 WDR46O15213 610 aaKnown RBP22.23■■□□□ 1.15
PRKAR1A-216ENST00000589017 GJA8P48165 433 aa22.23■■□□□ 1.15
PRKAR1A-216ENST00000589017 ATP2B2Q01814 1243 aa22.23■■□□□ 1.15
PRKAR1A-216ENST00000589017 CCDC129Q6ZRS4 1044 aa22.23■■□□□ 1.15
PRKAR1A-216ENST00000589017 GPR142Q7Z601 462 aa22.23■■□□□ 1.15
PRKAR1A-216ENST00000589017 SPICE1Q8N0Z3 855 aa22.23■■□□□ 1.15
PRKAR1A-216ENST00000589017 NUDT12Q9BQG2 462 aa22.23■■□□□ 1.15
PRKAR1A-216ENST00000589017 HOXC10Q9NYD6 342 aa22.23■■□□□ 1.15
PRKAR1A-216ENST00000589017 MYH4Q9Y623 1939 aa22.23■■□□□ 1.15
PRKAR1A-216ENST00000589017 FOXP2O15409 715 aa22.22■■□□□ 1.15
PRKAR1A-216ENST00000589017 HMGCRP04035 888 aa22.22■■□□□ 1.15
PRKAR1A-216ENST00000589017 PLEKHH3Q7Z736 793 aa22.22■■□□□ 1.15
PRKAR1A-216ENST00000589017 USP6NLQ92738 828 aa22.22■■□□□ 1.15
PRKAR1A-216ENST00000589017 OSBPL3Q9H4L5 887 aa22.22■■□□□ 1.15
PRKAR1A-216ENST00000589017 HELLSQ9NRZ9 838 aa22.22■■□□□ 1.15
PRKAR1A-216ENST00000589017 PDE4DIPQ5VU43 2346 aa22.22■■□□□ 1.15
PRKAR1A-216ENST00000589017 XRCC5P13010 732 aaKnown RBP22.21■■□□□ 1.15
PRKAR1A-216ENST00000589017 CYP2B6P20813 491 aa22.21■■□□□ 1.15
PRKAR1A-216ENST00000589017 MORN1Q5T089 497 aa22.21■■□□□ 1.15
PRKAR1A-216ENST00000589017 PRPF38BQ5VTL8 546 aaKnown RBP22.21■■□□□ 1.15
PRKAR1A-216ENST00000589017 PLEKHM2Q8IWE5 1019 aa22.21■■□□□ 1.15
PRKAR1A-216ENST00000589017 CWC22Q9HCG8 908 aaKnown RBP22.21■■□□□ 1.15
PRKAR1A-216ENST00000589017 GOPCQ9HD26 462 aa22.21■■□□□ 1.15
PRKAR1A-216ENST00000589017 ZNF236Q9UL36 1845 aa22.21■■□□□ 1.15
PRKAR1A-216ENST00000589017 COL11A1P12107 1806 aaPredicted RBP22.2■■□□□ 1.14
PRKAR1A-216ENST00000589017 IGKV6D-41A0A0C4DH26 115 aa22.2■■□□□ 1.14
PRKAR1A-216ENST00000589017 PRDM1O75626 825 aa22.2■■□□□ 1.14
PRKAR1A-216ENST00000589017 FLOT1O75955 427 aa22.2■■□□□ 1.14
PRKAR1A-216ENST00000589017 SLC3A2P08195 630 aaKnown RBP22.2■■□□□ 1.14
PRKAR1A-216ENST00000589017 DSG3P32926 999 aa22.2■■□□□ 1.14
PRKAR1A-216ENST00000589017 PPARAQ07869 468 aa22.2■■□□□ 1.14
PRKAR1A-216ENST00000589017 ZNF444Q8N0Y2 327 aaPredicted RBP22.2■■□□□ 1.14
PRKAR1A-216ENST00000589017 MB21D1Q8N884 522 aa22.2■■□□□ 1.14
PRKAR1A-216ENST00000589017 TRIB2Q92519 343 aa22.2■■□□□ 1.14
PRKAR1A-216ENST00000589017 PAK6Q9NQU5 681 aaPredicted RBP22.2■■□□□ 1.14
PRKAR1A-216ENST00000589017 NYAP2Q9P242 653 aa22.2■■□□□ 1.14
PRKAR1A-216ENST00000589017 PLIN4Q96Q06 1357 aa22.2■■□□□ 1.14
PRKAR1A-216ENST00000589017 MKI67P46013 3256 aaKnown RBP22.19■■□□□ 1.14
PRKAR1A-216ENST00000589017 A0A0D9SFI3 127 aa22.19■■□□□ 1.14
PRKAR1A-216ENST00000589017 TRIM6-TRIM34B2RNG4 842 aa22.19■■□□□ 1.14
PRKAR1A-216ENST00000589017 RGS2P41220 211 aa22.19■■□□□ 1.14
PRKAR1A-216ENST00000589017 PDE4BQ07343 736 aa22.19■■□□□ 1.14
PRKAR1A-216ENST00000589017 TRMT44Q8IYL2 757 aaKnown RBP22.19■■□□□ 1.14
PRKAR1A-216ENST00000589017 U2AF1L4Q8WU68 220 aaKnown RBP22.19■■□□□ 1.14
PRKAR1A-216ENST00000589017 FAM227BQ96M60 508 aa22.19■■□□□ 1.14
PRKAR1A-216ENST00000589017 SGPL1O95470 568 aa22.18■■□□□ 1.14
PRKAR1A-216ENST00000589017 MCMDC2Q4G0Z9 681 aa22.18■■□□□ 1.14
PRKAR1A-216ENST00000589017 VPS53Q5VIR6 699 aa22.18■■□□□ 1.14
PRKAR1A-216ENST00000589017 RILPL2Q969X0 211 aa22.18■■□□□ 1.14
PRKAR1A-216ENST00000589017 ATG4CQ96DT6 458 aa22.18■■□□□ 1.14
PRKAR1A-216ENST00000589017 APBA2Q99767 749 aa22.18■■□□□ 1.14
PRKAR1A-216ENST00000589017 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.18■■□□□ 1.14
PRKAR1A-216ENST00000589017 SLC15A5A6NIM6 579 aa22.17■■□□□ 1.14
PRKAR1A-216ENST00000589017 ZKSCAN1P17029 563 aaPredicted RBP22.17■■□□□ 1.14
PRKAR1A-216ENST00000589017 PTPREP23469 700 aa22.17■■□□□ 1.14
PRKAR1A-216ENST00000589017 TRIM32Q13049 653 aa22.17■■□□□ 1.14
PRKAR1A-216ENST00000589017 MAP2K5Q13163 448 aa22.17■■□□□ 1.14
PRKAR1A-216ENST00000589017 NMIQ13287 307 aaPredicted RBP22.17■■□□□ 1.14
PRKAR1A-216ENST00000589017 WDR78Q5VTH9 848 aa22.17■■□□□ 1.14
PRKAR1A-216ENST00000589017 MOV10L1Q9BXT6 1211 aaKnown RBP22.17■■□□□ 1.14
PRKAR1A-216ENST00000589017 SPATC1LQ9H0A9 340 aa22.17■■□□□ 1.14
PRKAR1A-216ENST00000589017 RPTORQ8N122 1335 aa22.16■■□□□ 1.14
PRKAR1A-216ENST00000589017 CAPN2P17655 700 aa22.16■■□□□ 1.14
PRKAR1A-216ENST00000589017 IRX6P78412 446 aaPredicted RBP22.16■■□□□ 1.14
PRKAR1A-216ENST00000589017 GRB14Q14449 540 aa22.16■■□□□ 1.14
PRKAR1A-216ENST00000589017 ALX1Q15699 326 aa22.16■■□□□ 1.14
PRKAR1A-216ENST00000589017 UBE2Q1Q7Z7E8 422 aa22.16■■□□□ 1.14
PRKAR1A-216ENST00000589017 SHCBP1Q8NEM2 672 aa22.16■■□□□ 1.14
PRKAR1A-216ENST00000589017 NEDD1Q8NHV4 660 aa22.16■■□□□ 1.14
PRKAR1A-216ENST00000589017 CEP95Q96GE4 821 aa22.16■■□□□ 1.14
PRKAR1A-216ENST00000589017 DEFB118Q96PH6 123 aa22.16■■□□□ 1.14
PRKAR1A-216ENST00000589017 MTMR4Q9NYA4 1195 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms