RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 WDR78Q5VTH9 848 aa17.21■□□□□ 0.35
CXXC1-208ENST00000587170 FRAT1Q92837 279 aaPredicted RBP17.21■□□□□ 0.35
CXXC1-208ENST00000587170 STRNO43815 780 aa17.2■□□□□ 0.34
CXXC1-208ENST00000587170 ADORA2AP29274 412 aa17.2■□□□□ 0.34
CXXC1-208ENST00000587170 PLCD1P51178 756 aa17.2■□□□□ 0.34
CXXC1-208ENST00000587170 ATN1P54259 1190 aaPredicted RBP17.2■□□□□ 0.34
CXXC1-208ENST00000587170 ARRDC4Q8NCT1 418 aa17.2■□□□□ 0.34
CXXC1-208ENST00000587170 MOV10L1Q9BXT6 1211 aaKnown RBP17.2■□□□□ 0.34
CXXC1-208ENST00000587170 CABP5Q9NP86 173 aa17.2■□□□□ 0.34
CXXC1-208ENST00000587170 GBF1Q92538 1859 aa17.19■□□□□ 0.34
CXXC1-208ENST00000587170 SEPT4O43236 478 aa17.19■□□□□ 0.34
CXXC1-208ENST00000587170 CNGA1P29973 690 aa17.19■□□□□ 0.34
CXXC1-208ENST00000587170 MAP3K12Q12852 859 aa17.19■□□□□ 0.34
CXXC1-208ENST00000587170 ZNF697Q5TEC3 545 aa17.19■□□□□ 0.34
CXXC1-208ENST00000587170 C1orf53Q5VUE5 145 aa17.19■□□□□ 0.34
CXXC1-208ENST00000587170 ZKSCAN2Q63HK3 967 aa17.19■□□□□ 0.34
CXXC1-208ENST00000587170 ABRAQ8N0Z2 381 aa17.19■□□□□ 0.34
CXXC1-208ENST00000587170 SPATC1LQ9H0A9 340 aa17.19■□□□□ 0.34
CXXC1-208ENST00000587170 CCDC8Q9H0W5 538 aaPredicted RBP17.19■□□□□ 0.34
CXXC1-208ENST00000587170 ANTXR1Q9H6X2 564 aa17.19■□□□□ 0.34
CXXC1-208ENST00000587170 PRKAG2Q9UGJ0 569 aa17.19■□□□□ 0.34
CXXC1-208ENST00000587170 REV3LO60673 3130 aa17.19■□□□□ 0.34
CXXC1-208ENST00000587170 NCOR1O75376 2440 aa17.19■□□□□ 0.34
CXXC1-208ENST00000587170 A0A1W2PRG0 241 aa17.18■□□□□ 0.34
CXXC1-208ENST00000587170 COG2Q14746 738 aa17.18■□□□□ 0.34
CXXC1-208ENST00000587170 SEPT2Q15019 361 aa17.18■□□□□ 0.34
CXXC1-208ENST00000587170 GJC2Q5T442 439 aaPredicted RBP17.18■□□□□ 0.34
CXXC1-208ENST00000587170 SLC39A5Q6ZMH5 540 aa17.18■□□□□ 0.34
CXXC1-208ENST00000587170 MB21D1Q8N884 522 aa17.18■□□□□ 0.34
CXXC1-208ENST00000587170 HOXC10Q9NYD6 342 aa17.18■□□□□ 0.34
CXXC1-208ENST00000587170 CHD7Q9P2D1 2997 aa17.18■□□□□ 0.34
CXXC1-208ENST00000587170 TRANK1O15050 2925 aa17.17■□□□□ 0.34
CXXC1-208ENST00000587170 KBTBD13C9JR72 458 aa17.17■□□□□ 0.34
CXXC1-208ENST00000587170 CCER2I3L3R5 266 aa17.17■□□□□ 0.34
CXXC1-208ENST00000587170 C1orf115Q9H7X2 142 aa17.17■□□□□ 0.34
CXXC1-208ENST00000587170 PDLIM7Q9NR12 457 aa17.17■□□□□ 0.34
CXXC1-208ENST00000587170 ATP11BQ9Y2G3 1177 aa17.17■□□□□ 0.34
CXXC1-208ENST00000587170 COBLO75128 1261 aa17.16■□□□□ 0.34
CXXC1-208ENST00000587170 ERCC3P19447 782 aa17.16■□□□□ 0.34
CXXC1-208ENST00000587170 EVX2Q03828 476 aa17.16■□□□□ 0.34
CXXC1-208ENST00000587170 SHHQ15465 462 aa17.16■□□□□ 0.34
CXXC1-208ENST00000587170 C9orf50Q5SZB4 431 aa17.16■□□□□ 0.34
CXXC1-208ENST00000587170 DPP9Q86TI2 863 aa17.16■□□□□ 0.34
CXXC1-208ENST00000587170 MROH8Q9H579 483 aa17.16■□□□□ 0.34
CXXC1-208ENST00000587170 MYO9BQ13459 2157 aa17.16■□□□□ 0.34
CXXC1-208ENST00000587170 BDP1A6H8Y1 2624 aa17.16■□□□□ 0.34
CXXC1-208ENST00000587170 SMAD3P84022 425 aaKnown RBP17.15■□□□□ 0.34
CXXC1-208ENST00000587170 TRIM60Q495X7 471 aa17.15■□□□□ 0.34
CXXC1-208ENST00000587170 KIAA1755Q5JYT7 1200 aa17.15■□□□□ 0.34
CXXC1-208ENST00000587170 TMEM179Q6ZVK1 233 aa17.15■□□□□ 0.34
CXXC1-208ENST00000587170 FAM161BQ96MY7 647 aa17.15■□□□□ 0.34
CXXC1-208ENST00000587170 CDX2Q99626 313 aaPredicted RBP17.15■□□□□ 0.34
CXXC1-208ENST00000587170 CRNKL1Q9BZJ0 848 aaKnown RBP17.15■□□□□ 0.34
CXXC1-208ENST00000587170 TANGO6Q9C0B7 1094 aa17.15■□□□□ 0.34
CXXC1-208ENST00000587170 NRBP1Q9UHY1 535 aa17.15■□□□□ 0.34
CXXC1-208ENST00000587170 MAGEB6P1A0A0J9YX57 407 aa17.14■□□□□ 0.33
CXXC1-208ENST00000587170 TCRBV5S4A2TA0A5A2 114 aa17.14■□□□□ 0.33
CXXC1-208ENST00000587170 PDE6AP16499 860 aa17.14■□□□□ 0.33
CXXC1-208ENST00000587170 DSG3P32926 999 aa17.14■□□□□ 0.33
CXXC1-208ENST00000587170 LRRC41Q15345 812 aa17.14■□□□□ 0.33
CXXC1-208ENST00000587170 TTF1Q15361 905 aaPredicted RBP17.14■□□□□ 0.33
CXXC1-208ENST00000587170 ERC1Q8IUD2 1116 aa17.14■□□□□ 0.33
CXXC1-208ENST00000587170 MAML3Q96JK9 1138 aa17.14■□□□□ 0.33
CXXC1-208ENST00000587170 DCP1AQ9NPI6 582 aaPredicted RBP17.14■□□□□ 0.33
CXXC1-208ENST00000587170 SLC5A4Q9NY91 659 aa17.14■□□□□ 0.33
CXXC1-208ENST00000587170 LRRC37A2A6NM11 1700 aa17.13■□□□□ 0.33
CXXC1-208ENST00000587170 TMEM265A0A087WTH1 108 aa17.13■□□□□ 0.33
CXXC1-208ENST00000587170 POLR3DP05423 398 aaPredicted RBP17.13■□□□□ 0.33
CXXC1-208ENST00000587170 RLBP1P12271 317 aa17.13■□□□□ 0.33
CXXC1-208ENST00000587170 FAM47AQ5JRC9 791 aa17.13■□□□□ 0.33
CXXC1-208ENST00000587170 CEP85Q6P2H3 762 aa17.13■□□□□ 0.33
CXXC1-208ENST00000587170 SIAH1Q8IUQ4 282 aa17.13■□□□□ 0.33
CXXC1-208ENST00000587170 MAFAQ8NHW3 353 aaPredicted RBP17.13■□□□□ 0.33
CXXC1-208ENST00000587170 BADQ92934 168 aa17.13■□□□□ 0.33
CXXC1-208ENST00000587170 TTYH1Q9H313 450 aaPredicted RBP17.13■□□□□ 0.33
CXXC1-208ENST00000587170 SEMA6BQ9H3T3 888 aa17.13■□□□□ 0.33
CXXC1-208ENST00000587170 MCM9Q9NXL9 1143 aa17.13■□□□□ 0.33
CXXC1-208ENST00000587170 SWAP70Q9UH65 585 aa17.13■□□□□ 0.33
CXXC1-208ENST00000587170 PHF24Q9UPV7 400 aa17.13■□□□□ 0.33
CXXC1-208ENST00000587170 TMX2Q9Y320 296 aa17.13■□□□□ 0.33
CXXC1-208ENST00000587170 TRIM43BA6NCK2 446 aa17.12■□□□□ 0.33
CXXC1-208ENST00000587170 ADCYAP1R1P41586 468 aa17.12■□□□□ 0.33
CXXC1-208ENST00000587170 ANO1Q5XXA6 986 aa17.12■□□□□ 0.33
CXXC1-208ENST00000587170 AACSQ86V21 672 aa17.12■□□□□ 0.33
CXXC1-208ENST00000587170 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.12■□□□□ 0.33
CXXC1-208ENST00000587170 TRIM43Q96BQ3 446 aaPredicted RBP17.12■□□□□ 0.33
CXXC1-208ENST00000587170 ATG4CQ96DT6 458 aa17.12■□□□□ 0.33
CXXC1-208ENST00000587170 PRDM5Q9NQX1 630 aaPredicted RBP17.12■□□□□ 0.33
CXXC1-208ENST00000587170 ADAMTS5Q9UNA0 930 aa17.12■□□□□ 0.33
CXXC1-208ENST00000587170 MPHOSPH10O00566 681 aaKnown RBP17.11■□□□□ 0.33
CXXC1-208ENST00000587170 WDR46O15213 610 aaKnown RBP17.11■□□□□ 0.33
CXXC1-208ENST00000587170 FLOT1O75955 427 aa17.11■□□□□ 0.33
CXXC1-208ENST00000587170 SLC9C2Q5TAH2 1124 aa17.11■□□□□ 0.33
CXXC1-208ENST00000587170 SH3RF1Q7Z6J0 888 aa17.11■□□□□ 0.33
CXXC1-208ENST00000587170 ITPRIPQ8IWB1 547 aa17.11■□□□□ 0.33
CXXC1-208ENST00000587170 FTSJ3Q8IY81 847 aaKnown RBP17.11■□□□□ 0.33
CXXC1-208ENST00000587170 LCORLQ8N3X6 602 aa17.11■□□□□ 0.33
CXXC1-208ENST00000587170 SLC44A5Q8NCS7 719 aa17.11■□□□□ 0.33
CXXC1-208ENST00000587170 SH2D4AQ9H788 454 aa17.11■□□□□ 0.33
CXXC1-208ENST00000587170 VCPKMTQ9H867 229 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms