RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-219ENST00000584476 LIMCH1Q9UPQ0 1083 aa6.91□□□□□ -1.3
MSI2-219ENST00000584476 ZNF646O15015 1829 aaPredicted RBP6.91□□□□□ -1.3
MSI2-219ENST00000584476 BRCA1P38398 1863 aaKnown RBP6.91□□□□□ -1.3
MSI2-219ENST00000584476 SCN9AQ15858 1988 aa6.91□□□□□ -1.3
MSI2-219ENST00000584476 B4E1Z4 1266 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 PSMD14O00487 310 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 PRC1O43663 620 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 DTNBO60941 627 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 HSP90AA1P07900 732 aaKnown RBP6.9□□□□□ -1.3
MSI2-219ENST00000584476 HMGB1P09429 215 aaKnown RBP6.9□□□□□ -1.3
MSI2-219ENST00000584476 CCNYL3P0C7X3 344 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 DDIT3P35638 169 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 USP5P45974 858 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 CRKP46108 304 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 INSM1Q01101 510 aaPredicted RBP6.9□□□□□ -1.3
MSI2-219ENST00000584476 ST3GAL1Q11201 340 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 ME3Q16798 604 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 SLC4A8Q2Y0W8 1093 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 AKNAD1Q5T1N1 836 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 APOBEC3HQ6NTF7 200 aaKnown RBP6.9□□□□□ -1.3
MSI2-219ENST00000584476 HHIPL2Q6UWX4 724 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 CYB5R4Q7L1T6 521 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 RALYLQ86SE5 291 aaKnown RBP6.9□□□□□ -1.3
MSI2-219ENST00000584476 MAPKAPK5Q8IW41 473 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 TEX11Q8IYF3 940 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 EHBP1Q8NDI1 1231 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 STAG1Q8WVM7 1258 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 TEKT1Q969V4 418 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 ATP8A2Q9NTI2 1148 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 MCM9Q9NXL9 1143 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 STK17AQ9UEE5 414 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 SAP30BPQ9UHR5 308 aaKnown RBP6.9□□□□□ -1.3
MSI2-219ENST00000584476 ANAPC4Q9UJX5 808 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 TPCN1Q9ULQ1 816 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 ZNRF3Q9ULT6 936 aa6.9□□□□□ -1.3
MSI2-219ENST00000584476 TIAM2Q8IVF5 1701 aa6.9□□□□□ -1.31
MSI2-219ENST00000584476 ADAMTSL1Q8N6G6 1762 aa6.9□□□□□ -1.31
MSI2-219ENST00000584476 CCDC88AQ3V6T2 1871 aa6.9□□□□□ -1.31
MSI2-219ENST00000584476 WDHD1O75717 1129 aaPredicted RBP6.89□□□□□ -1.31
MSI2-219ENST00000584476 VIL1P09327 827 aaKnown RBP6.89□□□□□ -1.31
MSI2-219ENST00000584476 MCM5P33992 734 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 HDLBPQ00341 1268 aaKnown RBP6.89□□□□□ -1.31
MSI2-219ENST00000584476 CXCL9Q07325 125 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 APOBRQ0VD83 1088 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 CUL4AQ13619 759 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 PTPRNQ16849 979 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 SBK1Q52WX2 424 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 RRP12Q5JTH9 1297 aaKnown RBP6.89□□□□□ -1.31
MSI2-219ENST00000584476 C12orf60Q5U649 245 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 CDC42EP5Q6NZY7 148 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 RSBN1LQ6PCB5 846 aaPredicted RBP6.89□□□□□ -1.31
MSI2-219ENST00000584476 MFSD6Q6ZSS7 791 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 CERS3Q8IU89 383 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 NECAB1Q8N987 351 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 SPIRE2Q8WWL2 714 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 BRF1Q92994 677 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 DYNLL2Q96FJ2 89 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 GMLQ99445 158 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 SYT17Q9BSW7 474 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 AGXT2Q9BYV1 514 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 USP40Q9NVE5 1235 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 EVA1BQ9NVM1 165 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 ARPP21Q9UBL0 812 aaPredicted RBP6.89□□□□□ -1.31
MSI2-219ENST00000584476 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.89□□□□□ -1.31
MSI2-219ENST00000584476 FLT1P17948 1338 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 LTBP3Q9NS15 1303 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 LAMA4Q16363 1823 aa6.89□□□□□ -1.31
MSI2-219ENST00000584476 MYH2Q9UKX2 1941 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 FER1L6Q2WGJ9 1857 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 WDR19Q8NEZ3 1342 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 SHTN1A0MZ66 631 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 SPDYE5A6NIY4 337 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 SH2B2O14492 632 aaPredicted RBP6.88□□□□□ -1.31
MSI2-219ENST00000584476 PRDM1O75626 825 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 FGRP09769 529 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 RBM5P52756 815 aaKnown RBP eCLIP6.88□□□□□ -1.31
MSI2-219ENST00000584476 CACNB3P54284 484 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 FGD1P98174 961 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 TRDNQ13061 729 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 STK3Q13188 491 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 PICALMQ13492 652 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 ANKRD1Q15327 319 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 CFAP100Q494V2 611 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 ARHGAP27Q6ZUM4 889 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 CCDC83Q8IWF9 413 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 JDP2Q8WYK2 163 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 ZSCAN31Q96LW9 406 aaPredicted RBP6.88□□□□□ -1.31
MSI2-219ENST00000584476 PCMTD1Q96MG8 357 aaPredicted RBP6.88□□□□□ -1.31
MSI2-219ENST00000584476 ZDHHC15Q96MV8 337 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 MRIQ9BWK5 157 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 RNF41Q9H4P4 317 aaPredicted RBP6.88□□□□□ -1.31
MSI2-219ENST00000584476 CNNM2Q9H8M5 875 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 DDX4Q9NQI0 724 aaKnown RBP6.88□□□□□ -1.31
MSI2-219ENST00000584476 SH2B1Q9NRF2 756 aaPredicted RBP6.88□□□□□ -1.31
MSI2-219ENST00000584476 TOMM22Q9NS69 142 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 ZSWIM5Q9P217 1185 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 BRPF3Q9ULD4 1205 aa6.88□□□□□ -1.31
MSI2-219ENST00000584476 MYO3BQ8WXR4 1341 aa6.87□□□□□ -1.31
MSI2-219ENST00000584476 IFIT3O14879 490 aaKnown RBP6.87□□□□□ -1.31
MSI2-219ENST00000584476 ORC4O43929 436 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms