RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-219ENST00000584476 AEBP2Q6ZN18 517 aaPredicted RBP19.49■□□□□ 0.71
MSI2-219ENST00000584476 CHIC1Q5VXU3 224 aa18.51■□□□□ 0.55
MSI2-219ENST00000584476 SENP3Q9H4L4 574 aaPredicted RBP16.68■□□□□ 0.26
MSI2-219ENST00000584476 PHF23Q9BUL5 403 aaPredicted RBP16.44■□□□□ 0.22
MSI2-219ENST00000584476 FOXD1Q16676 465 aa15.51■□□□□ 0.07
MSI2-219ENST00000584476 PLPPR3Q6T4P5 718 aa14.8□□□□□ -0.04
MSI2-219ENST00000584476 MSH5O43196 834 aa14.58□□□□□ -0.08
MSI2-219ENST00000584476 PIAS4Q8N2W9 510 aaPredicted RBP14.48□□□□□ -0.09
MSI2-219ENST00000584476 PPP6R1Q9UPN7 881 aa14.47□□□□□ -0.09
MSI2-219ENST00000584476 ADRA2BP18089 450 aa14.41□□□□□ -0.1
MSI2-219ENST00000584476 POTEDQ86YR6 584 aa14.22□□□□□ -0.13
MSI2-219ENST00000584476 NISCHQ9Y2I1 1504 aa13.41□□□□□ -0.26
MSI2-219ENST00000584476 SCAF1Q9H7N4 1312 aaKnown RBP13.27□□□□□ -0.29
MSI2-219ENST00000584476 MAPK8IP2Q13387 824 aaPredicted RBP13.25□□□□□ -0.29
MSI2-219ENST00000584476 DMRT2Q9Y5R5 561 aa13.21□□□□□ -0.29
MSI2-219ENST00000584476 PPP4R3CPQ6ZMV5 832 aa12.94□□□□□ -0.34
MSI2-219ENST00000584476 HOXD11P31277 338 aaPredicted RBP12.74□□□□□ -0.37
MSI2-219ENST00000584476 CNKSR2Q8WXI2 1034 aa12.73□□□□□ -0.37
MSI2-219ENST00000584476 RNF216Q9NWF9 866 aaPredicted RBP12.64□□□□□ -0.39
MSI2-219ENST00000584476 DCAF8L1A6NGE4 600 aa12.62□□□□□ -0.39
MSI2-219ENST00000584476 CACNB1Q02641 598 aaPredicted RBP12.48□□□□□ -0.41
MSI2-219ENST00000584476 NCBP3Q53F19 620 aaKnown RBP12.48□□□□□ -0.41
MSI2-219ENST00000584476 RNF39Q9H2S5 420 aa12.42□□□□□ -0.42
MSI2-219ENST00000584476 DNAJC5BQ9UF47 199 aa12.37□□□□□ -0.43
MSI2-219ENST00000584476 C1QBPQ07021 282 aaKnown RBP12.26□□□□□ -0.45
MSI2-219ENST00000584476 NPM3O75607 178 aaKnown RBP12.25□□□□□ -0.45
MSI2-219ENST00000584476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.1□□□□□ -0.47
MSI2-219ENST00000584476 KCNA4P22459 653 aa11.97□□□□□ -0.49
MSI2-219ENST00000584476 U3KPZ7 1027 aaPredicted RBP11.85□□□□□ -0.51
MSI2-219ENST00000584476 SLC4A2P04920 1241 aa11.71□□□□□ -0.53
MSI2-219ENST00000584476 CCDC180Q9P1Z9 1646 aa11.69□□□□□ -0.54
MSI2-219ENST00000584476 SPINK5Q9NQ38 1064 aaPredicted RBP11.66□□□□□ -0.54
MSI2-219ENST00000584476 CAPN15O75808 1086 aa11.65□□□□□ -0.54
MSI2-219ENST00000584476 DSG3P32926 999 aa11.61□□□□□ -0.55
MSI2-219ENST00000584476 APLP2Q06481 763 aa11.57□□□□□ -0.56
MSI2-219ENST00000584476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.56□□□□□ -0.56
MSI2-219ENST00000584476 HNRNPUL2Q1KMD3 747 aaKnown RBP11.56□□□□□ -0.56
MSI2-219ENST00000584476 ZNF219Q9P2Y4 722 aaPredicted RBP11.48□□□□□ -0.57
MSI2-219ENST00000584476 SAMD1Q6SPF0 538 aaPredicted RBP11.47□□□□□ -0.57
MSI2-219ENST00000584476 TRHP20396 242 aaPredicted RBP11.45□□□□□ -0.58
MSI2-219ENST00000584476 MYCNP04198 464 aaPredicted RBP11.35□□□□□ -0.59
MSI2-219ENST00000584476 ABCB7O75027 752 aa11.34□□□□□ -0.59
MSI2-219ENST00000584476 SLC4A1APQ9BWU0 796 aaKnown RBP11.31□□□□□ -0.6
MSI2-219ENST00000584476 ZCCHC6Q5VYS8 1495 aaKnown RBP11.25□□□□□ -0.61
MSI2-219ENST00000584476 FOXD4L1Q9NU39 408 aa11.22□□□□□ -0.61
MSI2-219ENST00000584476 ABCC9O60706 1549 aa11.19□□□□□ -0.62
MSI2-219ENST00000584476 POLA2Q14181 598 aa11.16□□□□□ -0.62
MSI2-219ENST00000584476 POTEHQ6S545 545 aa11.14□□□□□ -0.63
MSI2-219ENST00000584476 DCAF8L2P0C7V8 631 aa11.12□□□□□ -0.63
MSI2-219ENST00000584476 RBM42Q9BTD8 480 aaKnown RBP11.11□□□□□ -0.63
MSI2-219ENST00000584476 DCAF1Q9Y4B6 1507 aa11.06□□□□□ -0.64
MSI2-219ENST00000584476 ATF5Q9Y2D1 282 aaPredicted RBP11.05□□□□□ -0.64
MSI2-219ENST00000584476 ZBTB22O15209 634 aa11□□□□□ -0.65
MSI2-219ENST00000584476 ZBTB12Q9Y330 459 aaPredicted RBP10.97□□□□□ -0.65
MSI2-219ENST00000584476 MYO15BQ96JP2 1530 aa10.95□□□□□ -0.66
MSI2-219ENST00000584476 SHROOM4Q9ULL8 1493 aa10.93□□□□□ -0.66
MSI2-219ENST00000584476 NACADO15069 1562 aa10.92□□□□□ -0.66
MSI2-219ENST00000584476 ATXN8OSP0DMR3 200 aa10.92□□□□□ -0.66
MSI2-219ENST00000584476 RB1CC1Q8TDY2 1594 aa10.85□□□□□ -0.67
MSI2-219ENST00000584476 CHRDL2Q6WN34 429 aa10.84□□□□□ -0.67
MSI2-219ENST00000584476 AKT1S1Q96B36 256 aa10.84□□□□□ -0.67
MSI2-219ENST00000584476 SCRIBQ14160 1630 aa10.78□□□□□ -0.68
MSI2-219ENST00000584476 OSCARQ8IYS5 282 aa10.77□□□□□ -0.69
MSI2-219ENST00000584476 REM2Q8IYK8 340 aaPredicted RBP10.72□□□□□ -0.69
MSI2-219ENST00000584476 FBLN2P98095 1184 aa10.67□□□□□ -0.7
MSI2-219ENST00000584476 SPDYE2BA6NHP3 402 aa10.62□□□□□ -0.71
MSI2-219ENST00000584476 SPDYE6P0CI01 402 aa10.62□□□□□ -0.71
MSI2-219ENST00000584476 SPDYE2Q495Y8 402 aa10.62□□□□□ -0.71
MSI2-219ENST00000584476 EHMT2Q96KQ7 1210 aa10.62□□□□□ -0.71
MSI2-219ENST00000584476 UNC13AQ9UPW8 1703 aa10.61□□□□□ -0.71
MSI2-219ENST00000584476 PITPNM1O00562 1244 aa10.58□□□□□ -0.72
MSI2-219ENST00000584476 PIP4P2Q8N4L2 257 aa10.57□□□□□ -0.72
MSI2-219ENST00000584476 PABPN1Q86U42 306 aaKnown RBP eCLIP10.56□□□□□ -0.72
MSI2-219ENST00000584476 BICRAQ9NZM4 1560 aa10.56□□□□□ -0.72
MSI2-219ENST00000584476 MKRN4PQ13434 485 aaPredicted RBP10.55□□□□□ -0.72
MSI2-219ENST00000584476 FXR2P51116 673 aaKnown RBP eCLIP10.53□□□□□ -0.72
MSI2-219ENST00000584476 CSRNP3Q8WYN3 585 aa10.49□□□□□ -0.73
MSI2-219ENST00000584476 ZNF692Q9BU19 519 aaPredicted RBP10.47□□□□□ -0.73
MSI2-219ENST00000584476 SUPT5HO00267 1087 aaKnown RBP10.46□□□□□ -0.73
MSI2-219ENST00000584476 SSUH2Q9Y2M2 353 aa10.46□□□□□ -0.73
MSI2-219ENST00000584476 CECR2Q9BXF3 1484 aa10.46□□□□□ -0.74
MSI2-219ENST00000584476 SP7Q8TDD2 431 aaPredicted RBP10.44□□□□□ -0.74
MSI2-219ENST00000584476 SPDYE1Q8NFV5 336 aaPredicted RBP10.43□□□□□ -0.74
MSI2-219ENST00000584476 HAX1O00165 279 aa10.39□□□□□ -0.75
MSI2-219ENST00000584476 RSF1Q96T23 1441 aaPredicted RBP10.39□□□□□ -0.75
MSI2-219ENST00000584476 MROH2BQ7Z745 1585 aa10.37□□□□□ -0.75
MSI2-219ENST00000584476 CLEC11AQ9Y240 323 aa10.37□□□□□ -0.75
MSI2-219ENST00000584476 BAZ1AQ9NRL2 1556 aaPredicted RBP10.35□□□□□ -0.75
MSI2-219ENST00000584476 SMARCA4P51532 1647 aa10.32□□□□□ -0.76
MSI2-219ENST00000584476 PRKAR2AP13861 404 aaKnown RBP10.31□□□□□ -0.76
MSI2-219ENST00000584476 WIZO95785 1651 aa10.27□□□□□ -0.77
MSI2-219ENST00000584476 PRR29P0C7W0 189 aa10.23□□□□□ -0.77
MSI2-219ENST00000584476 EVX2Q03828 476 aa10.23□□□□□ -0.77
MSI2-219ENST00000584476 EIF4G1Q04637 1599 aaKnown RBP10.22□□□□□ -0.77
MSI2-219ENST00000584476 C19orf67A6NJJ6 358 aa10.19□□□□□ -0.78
MSI2-219ENST00000584476 PEG3Q9GZU2 1588 aa10.18□□□□□ -0.78
MSI2-219ENST00000584476 ATAD2BQ9ULI0 1458 aa10.18□□□□□ -0.78
MSI2-219ENST00000584476 CHADLQ6NUI6 762 aa10.17□□□□□ -0.78
MSI2-219ENST00000584476 TOP2AP11388 1531 aaKnown RBP10.16□□□□□ -0.78
MSI2-219ENST00000584476 SMARCA2P51531 1590 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 291.2 ms