RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 KLRF2D3W0D1 207 aa16.02■□□□□ 0.16
TVP23A-207ENST00000573360 ORC4O43929 436 aa16.02■□□□□ 0.15
TVP23A-207ENST00000573360 IFNAR1P17181 557 aa16.02■□□□□ 0.15
TVP23A-207ENST00000573360 XBP1P17861 261 aa16.02■□□□□ 0.15
TVP23A-207ENST00000573360 KIF5BP33176 963 aa16.02■□□□□ 0.15
TVP23A-207ENST00000573360 SEPT2Q15019 361 aa16.02■□□□□ 0.15
TVP23A-207ENST00000573360 MAP3K11Q16584 847 aa16.02■□□□□ 0.15
TVP23A-207ENST00000573360 TRIM5Q9C035 493 aa16.02■□□□□ 0.15
TVP23A-207ENST00000573360 GAKO14976 1311 aa16.02■□□□□ 0.15
TVP23A-207ENST00000573360 CACNA1SQ13698 1873 aa16.02■□□□□ 0.15
TVP23A-207ENST00000573360 DEXIO95424 95 aa16.01■□□□□ 0.15
TVP23A-207ENST00000573360 LUZP1Q86V48 1076 aa16.01■□□□□ 0.15
TVP23A-207ENST00000573360 FSIP1Q8NA03 581 aa16.01■□□□□ 0.15
TVP23A-207ENST00000573360 FAM198AQ9UFP1 575 aa16.01■□□□□ 0.15
TVP23A-207ENST00000573360 ASTN2O75129 1339 aaPredicted RBP16.01■□□□□ 0.15
TVP23A-207ENST00000573360 GOLGA6L6A8MZA4 724 aa16.01■□□□□ 0.15
TVP23A-207ENST00000573360 KIF23Q02241 960 aaPredicted RBP16.01■□□□□ 0.15
TVP23A-207ENST00000573360 MYSM1Q5VVJ2 828 aa16.01■□□□□ 0.15
TVP23A-207ENST00000573360 MYO1BO43795 1136 aa16.01■□□□□ 0.15
TVP23A-207ENST00000573360 HHIPL2Q6UWX4 724 aa16.01■□□□□ 0.15
TVP23A-207ENST00000573360 CCAR1Q8IX12 1150 aaKnown RBP16.01■□□□□ 0.15
TVP23A-207ENST00000573360 CLIC6Q96NY7 704 aa16.01■□□□□ 0.15
TVP23A-207ENST00000573360 SPON1Q9HCB6 807 aa16.01■□□□□ 0.15
TVP23A-207ENST00000573360 NFKBIEO00221 500 aa16■□□□□ 0.15
TVP23A-207ENST00000573360 FMNL1O95466 1100 aaPredicted RBP16■□□□□ 0.15
TVP23A-207ENST00000573360 GH2P01242 217 aa16■□□□□ 0.15
TVP23A-207ENST00000573360 PARP1P09874 1014 aaKnown RBP16■□□□□ 0.15
TVP23A-207ENST00000573360 SDF4Q9BRK5 362 aa16■□□□□ 0.15
TVP23A-207ENST00000573360 TTBK2Q6IQ55 1244 aa16■□□□□ 0.15
TVP23A-207ENST00000573360 CCDC73Q6ZRK6 1079 aa16■□□□□ 0.15
TVP23A-207ENST00000573360 C16orf86Q6ZW13 317 aa16■□□□□ 0.15
TVP23A-207ENST00000573360 ZDHHC15Q96MV8 337 aa16■□□□□ 0.15
TVP23A-207ENST00000573360 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16■□□□□ 0.15
TVP23A-207ENST00000573360 MYH7P12883 1935 aa16■□□□□ 0.15
TVP23A-207ENST00000573360 MYH2Q9UKX2 1941 aa16■□□□□ 0.15
TVP23A-207ENST00000573360 NR1I2O75469 434 aa16■□□□□ 0.15
TVP23A-207ENST00000573360 EVCP57679 992 aa16■□□□□ 0.15
TVP23A-207ENST00000573360 DLK2Q6UY11 383 aa16■□□□□ 0.15
TVP23A-207ENST00000573360 PIK3AP1Q6ZUJ8 805 aa16■□□□□ 0.15
TVP23A-207ENST00000573360 WASF1Q92558 559 aa16■□□□□ 0.15
TVP23A-207ENST00000573360 PGBD1Q96JS3 809 aa16■□□□□ 0.15
TVP23A-207ENST00000573360 TAL1P17542 331 aaPredicted RBP15.99■□□□□ 0.15
TVP23A-207ENST00000573360 TGFB2P61812 414 aa15.99■□□□□ 0.15
TVP23A-207ENST00000573360 ZNF174Q15697 407 aa15.99■□□□□ 0.15
TVP23A-207ENST00000573360 CHD4Q14839 1912 aa15.99■□□□□ 0.15
TVP23A-207ENST00000573360 FAM163AQ96GL9 167 aaPredicted RBP15.99■□□□□ 0.15
TVP23A-207ENST00000573360 TMTC3Q6ZXV5 915 aa15.99■□□□□ 0.15
TVP23A-207ENST00000573360 PI4KBQ9UBF8 816 aa15.99■□□□□ 0.15
TVP23A-207ENST00000573360 ANKRD31Q8N7Z5 1873 aa15.99■□□□□ 0.15
TVP23A-207ENST00000573360 BIN1O00499 593 aa15.98■□□□□ 0.15
TVP23A-207ENST00000573360 GMPSP49915 693 aaPredicted RBP15.98■□□□□ 0.15
TVP23A-207ENST00000573360 MICALL2Q8IY33 904 aa15.98■□□□□ 0.15
TVP23A-207ENST00000573360 TCHHQ07283 1943 aa15.98■□□□□ 0.15
TVP23A-207ENST00000573360 WDR19Q8NEZ3 1342 aa15.98■□□□□ 0.15
TVP23A-207ENST00000573360 COA7Q96BR5 231 aa15.98■□□□□ 0.15
TVP23A-207ENST00000573360 PIGSQ96S52 555 aa15.98■□□□□ 0.15
TVP23A-207ENST00000573360 PRDM10Q9NQV6 1147 aa15.98■□□□□ 0.15
TVP23A-207ENST00000573360 SEC63Q9UGP8 760 aaKnown RBP15.98■□□□□ 0.15
TVP23A-207ENST00000573360 SPTLC2O15270 562 aa15.98■□□□□ 0.15
TVP23A-207ENST00000573360 CALM1P0DP23 149 aa15.98■□□□□ 0.15
TVP23A-207ENST00000573360 CALM2P0DP24 149 aa15.98■□□□□ 0.15
TVP23A-207ENST00000573360 CALM3P0DP25 149 aa15.98■□□□□ 0.15
TVP23A-207ENST00000573360 NAPAP54920 295 aa15.98■□□□□ 0.15
TVP23A-207ENST00000573360 ANO6Q4KMQ2 910 aa15.98■□□□□ 0.15
TVP23A-207ENST00000573360 SH3BP5LQ7L8J4 393 aa15.98■□□□□ 0.15
TVP23A-207ENST00000573360 DYNC1I1O14576 645 aa15.97■□□□□ 0.15
TVP23A-207ENST00000573360 ICA1Q05084 483 aa15.97■□□□□ 0.15
TVP23A-207ENST00000573360 TYRO3Q06418 890 aa15.97■□□□□ 0.15
TVP23A-207ENST00000573360 RASSF8Q8NHQ8 419 aa15.97■□□□□ 0.15
TVP23A-207ENST00000573360 BRMS1Q9HCU9 246 aa15.97■□□□□ 0.15
TVP23A-207ENST00000573360 ZNF70Q9UC06 446 aaPredicted RBP15.97■□□□□ 0.15
TVP23A-207ENST00000573360 MCM7P33993 719 aa15.97■□□□□ 0.15
TVP23A-207ENST00000573360 SHMT1P34896 483 aa15.97■□□□□ 0.15
TVP23A-207ENST00000573360 TMEM87AQ8NBN3 555 aa15.97■□□□□ 0.15
TVP23A-207ENST00000573360 NEDD1Q8NHV4 660 aa15.97■□□□□ 0.15
TVP23A-207ENST00000573360 ZNF592Q92610 1267 aa15.97■□□□□ 0.15
TVP23A-207ENST00000573360 SPDYE2BA6NHP3 402 aa15.97■□□□□ 0.15
TVP23A-207ENST00000573360 ADAMTS3O15072 1205 aa15.97■□□□□ 0.15
TVP23A-207ENST00000573360 SPDYE6P0CI01 402 aa15.97■□□□□ 0.15
TVP23A-207ENST00000573360 EEF2P13639 858 aaKnown RBP15.97■□□□□ 0.15
TVP23A-207ENST00000573360 SLC1A4P43007 532 aa15.97■□□□□ 0.15
TVP23A-207ENST00000573360 ABCB5Q2M3G0 1257 aa15.97■□□□□ 0.15
TVP23A-207ENST00000573360 ANO1Q5XXA6 986 aa15.97■□□□□ 0.15
TVP23A-207ENST00000573360 DGKHQ86XP1 1220 aa15.97■□□□□ 0.15
TVP23A-207ENST00000573360 FEZ1Q99689 392 aa15.97■□□□□ 0.15
TVP23A-207ENST00000573360 CNOT7Q9UIV1 285 aaKnown RBP15.97■□□□□ 0.15
TVP23A-207ENST00000573360 SUGT1Q9Y2Z0 365 aa15.97■□□□□ 0.15
TVP23A-207ENST00000573360 PTGS1P23219 599 aa15.96■□□□□ 0.15
TVP23A-207ENST00000573360 USH1GQ495M9 461 aa15.96■□□□□ 0.15
TVP23A-207ENST00000573360 JAKMIP3Q5VZ66 844 aa15.96■□□□□ 0.15
TVP23A-207ENST00000573360 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.96■□□□□ 0.15
TVP23A-207ENST00000573360 MTMR4Q9NYA4 1195 aa15.96■□□□□ 0.15
TVP23A-207ENST00000573360 SERPINA10Q9UK55 444 aa15.96■□□□□ 0.15
TVP23A-207ENST00000573360 PCDHA7Q9UN72 937 aa15.96■□□□□ 0.15
TVP23A-207ENST00000573360 TNS1Q9HBL0 1735 aaKnown RBP15.96■□□□□ 0.15
TVP23A-207ENST00000573360 KINO60870 393 aaKnown RBP15.96■□□□□ 0.15
TVP23A-207ENST00000573360 SCG2P13521 617 aa15.96■□□□□ 0.15
TVP23A-207ENST00000573360 EARS2Q5JPH6 523 aaKnown RBP15.96■□□□□ 0.15
TVP23A-207ENST00000573360 DNAJC18Q9H819 358 aa15.96■□□□□ 0.15
TVP23A-207ENST00000573360 RBM28Q9NW13 759 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms