RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 TNNI2P48788 182 aa17.96■□□□□ 0.47
COMMD4-210ENST00000564587 CACNB3P54284 484 aa17.96■□□□□ 0.47
COMMD4-210ENST00000564587 ZNF280AP59817 542 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-210ENST00000564587 ZNF445P59923 1031 aa17.96■□□□□ 0.47
COMMD4-210ENST00000564587 CERKLQ49MI3 558 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-210ENST00000564587 ASPRV1Q53RT3 343 aa17.96■□□□□ 0.47
COMMD4-210ENST00000564587 L1TD1Q5T7N2 865 aaKnown RBP17.96■□□□□ 0.47
COMMD4-210ENST00000564587 ZFPM1Q8IX07 1006 aa17.96■□□□□ 0.47
COMMD4-210ENST00000564587 KCNG4Q8TDN1 519 aa17.96■□□□□ 0.47
COMMD4-210ENST00000564587 ZBED3Q96IU2 234 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-210ENST00000564587 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.96■□□□□ 0.47
COMMD4-210ENST00000564587 SPZ1Q9BXG8 430 aa17.96■□□□□ 0.47
COMMD4-210ENST00000564587 KANSL2Q9H9L4 492 aa17.96■□□□□ 0.47
COMMD4-210ENST00000564587 MAD2L2Q9UI95 211 aa17.96■□□□□ 0.47
COMMD4-210ENST00000564587 ZBTB12Q9Y330 459 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-210ENST00000564587 FZD9O00144 591 aa17.95■□□□□ 0.46
COMMD4-210ENST00000564587 SCG2P13521 617 aa17.95■□□□□ 0.46
COMMD4-210ENST00000564587 GUCY1A2P33402 732 aa17.95■□□□□ 0.46
COMMD4-210ENST00000564587 PKN1Q16512 942 aa17.95■□□□□ 0.46
COMMD4-210ENST00000564587 PFKFB3Q16875 520 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-210ENST00000564587 TMEM179Q6ZVK1 233 aa17.95■□□□□ 0.46
COMMD4-210ENST00000564587 USP28Q96RU2 1077 aa17.95■□□□□ 0.46
COMMD4-210ENST00000564587 GREB1LQ9C091 1923 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-210ENST00000564587 GOLGA6L3A6NEY3 463 aa17.94■□□□□ 0.46
COMMD4-210ENST00000564587 CALML3P27482 149 aa17.94■□□□□ 0.46
COMMD4-210ENST00000564587 NASPP49321 788 aaPredicted RBP17.94■□□□□ 0.46
COMMD4-210ENST00000564587 CCDC183Q5T5S1 534 aa17.94■□□□□ 0.46
COMMD4-210ENST00000564587 GALNT17Q6IS24 598 aa17.94■□□□□ 0.46
COMMD4-210ENST00000564587 SH3BP5LQ7L8J4 393 aa17.94■□□□□ 0.46
COMMD4-210ENST00000564587 NOSTRINQ8IVI9 506 aa17.94■□□□□ 0.46
COMMD4-210ENST00000564587 DIS3L2Q8IYB7 885 aaKnown RBP17.94■□□□□ 0.46
COMMD4-210ENST00000564587 CMTR1Q8N1G2 835 aaKnown RBP17.94■□□□□ 0.46
COMMD4-210ENST00000564587 JMYQ8N9B5 988 aa17.94■□□□□ 0.46
COMMD4-210ENST00000564587 CABP5Q9NP86 173 aa17.94■□□□□ 0.46
COMMD4-210ENST00000564587 MYOZ2Q9NPC6 264 aa17.94■□□□□ 0.46
COMMD4-210ENST00000564587 NYAP2Q9P242 653 aa17.94■□□□□ 0.46
COMMD4-210ENST00000564587 SYNPO2Q9UMS6 1093 aa17.94■□□□□ 0.46
COMMD4-210ENST00000564587 KIF28PB7ZC32 967 aa17.93■□□□□ 0.46
COMMD4-210ENST00000564587 KLRF2D3W0D1 207 aa17.93■□□□□ 0.46
COMMD4-210ENST00000564587 MPHOSPH10O00566 681 aaKnown RBP17.93■□□□□ 0.46
COMMD4-210ENST00000564587 TBC1D12O60347 775 aa17.93■□□□□ 0.46
COMMD4-210ENST00000564587 DEKP35659 375 aaKnown RBP17.93■□□□□ 0.46
COMMD4-210ENST00000564587 KRT2P35908 639 aa17.93■□□□□ 0.46
COMMD4-210ENST00000564587 TNFAIP1Q13829 316 aa17.93■□□□□ 0.46
COMMD4-210ENST00000564587 STK38Q15208 465 aa17.93■□□□□ 0.46
COMMD4-210ENST00000564587 ZSCAN23Q3MJ62 389 aa17.93■□□□□ 0.46
COMMD4-210ENST00000564587 RILPL1Q5EBL4 403 aa17.93■□□□□ 0.46
COMMD4-210ENST00000564587 ANO1Q5XXA6 986 aa17.93■□□□□ 0.46
COMMD4-210ENST00000564587 CCDC148Q8NFR7 591 aa17.93■□□□□ 0.46
COMMD4-210ENST00000564587 NLGN2Q8NFZ4 835 aa17.93■□□□□ 0.46
COMMD4-210ENST00000564587 CCDC12Q8WUD4 166 aaPredicted RBP17.93■□□□□ 0.46
COMMD4-210ENST00000564587 MKL1Q969V6 931 aa17.93■□□□□ 0.46
COMMD4-210ENST00000564587 CSRNP1Q96S65 589 aa17.93■□□□□ 0.46
COMMD4-210ENST00000564587 PHF20Q9BVI0 1012 aa17.93■□□□□ 0.46
COMMD4-210ENST00000564587 GJB4Q9NTQ9 266 aa17.93■□□□□ 0.46
COMMD4-210ENST00000564587 SIPA1L1O43166 1804 aa17.93■□□□□ 0.46
COMMD4-210ENST00000564587 TCP10L2B9ZVM9 353 aa17.92■□□□□ 0.46
COMMD4-210ENST00000564587 hCG_1984214I3L0E3 225 aa17.92■□□□□ 0.46
COMMD4-210ENST00000564587 SNHG28P0DPA3 235 aa17.92■□□□□ 0.46
COMMD4-210ENST00000564587 SF3A1Q15459 793 aaKnown RBP17.92■□□□□ 0.46
COMMD4-210ENST00000564587 GPR162Q16538 588 aa17.92■□□□□ 0.46
COMMD4-210ENST00000564587 ABCB5Q2M3G0 1257 aa17.92■□□□□ 0.46
COMMD4-210ENST00000564587 GPATCH4Q5T3I0 446 aaKnown RBP17.92■□□□□ 0.46
COMMD4-210ENST00000564587 RBM26Q5T8P6 1007 aaKnown RBP17.92■□□□□ 0.46
COMMD4-210ENST00000564587 ZNF713Q8N859 430 aaPredicted RBP17.92■□□□□ 0.46
COMMD4-210ENST00000564587 LINC00301Q8NCQ3 95 aa17.92■□□□□ 0.46
COMMD4-210ENST00000564587 DNAJC18Q9H819 358 aa17.92■□□□□ 0.46
COMMD4-210ENST00000564587 TMEM63CQ9P1W3 806 aa17.92■□□□□ 0.46
COMMD4-210ENST00000564587 CLIP2Q9UDT6 1046 aa17.92■□□□□ 0.46
COMMD4-210ENST00000564587 CLRN2A0PK11 232 aa17.91■□□□□ 0.46
COMMD4-210ENST00000564587 STAG2Q8N3U4 1231 aa17.91■□□□□ 0.46
COMMD4-210ENST00000564587 BICD2Q8TD16 824 aa17.91■□□□□ 0.46
COMMD4-210ENST00000564587 RRP36Q96EU6 259 aaKnown RBP17.91■□□□□ 0.46
COMMD4-210ENST00000564587 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.91■□□□□ 0.46
COMMD4-210ENST00000564587 VEZTQ9HBM0 779 aa17.91■□□□□ 0.46
COMMD4-210ENST00000564587 DDX19AQ9NUU7 478 aaKnown RBP17.91■□□□□ 0.46
COMMD4-210ENST00000564587 KCNJ14Q9UNX9 436 aa17.91■□□□□ 0.46
COMMD4-210ENST00000564587 CEP131Q9UPN4 1083 aa17.91■□□□□ 0.46
COMMD4-210ENST00000564587 A0A1W2PQ27 194 aa17.9■□□□□ 0.46
COMMD4-210ENST00000564587 A0A1W2PQ64 194 aa17.9■□□□□ 0.46
COMMD4-210ENST00000564587 A0A1W2PQD8 194 aa17.9■□□□□ 0.46
COMMD4-210ENST00000564587 FSD2A1L4K1 749 aa17.9■□□□□ 0.46
COMMD4-210ENST00000564587 BTBD18B2RXH4 712 aa17.9■□□□□ 0.46
COMMD4-210ENST00000564587 WNT10BO00744 389 aa17.9■□□□□ 0.46
COMMD4-210ENST00000564587 SPTLC2O15270 562 aa17.9■□□□□ 0.46
COMMD4-210ENST00000564587 PPP6R2O75170 966 aa17.9■□□□□ 0.46
COMMD4-210ENST00000564587 BMP15O95972 392 aa17.9■□□□□ 0.46
COMMD4-210ENST00000564587 PDHBP11177 359 aa17.9■□□□□ 0.46
COMMD4-210ENST00000564587 LMNB1P20700 586 aa17.9■□□□□ 0.46
COMMD4-210ENST00000564587 NLRP5P59047 1200 aa17.9■□□□□ 0.46
COMMD4-210ENST00000564587 RASSF7Q02833 373 aa17.9■□□□□ 0.46
COMMD4-210ENST00000564587 SLC39A14Q15043 492 aa17.9■□□□□ 0.46
COMMD4-210ENST00000564587 ADALQ6DHV7 355 aa17.9■□□□□ 0.46
COMMD4-210ENST00000564587 VPS54Q9P1Q0 977 aa17.9■□□□□ 0.46
COMMD4-210ENST00000564587 SEC63Q9UGP8 760 aaKnown RBP17.9■□□□□ 0.46
COMMD4-210ENST00000564587 NOL7Q9UMY1 257 aaKnown RBP17.9■□□□□ 0.46
COMMD4-210ENST00000564587 MORC2Q9Y6X9 1032 aaPredicted RBP17.9■□□□□ 0.46
COMMD4-210ENST00000564587 ME1P48163 572 aa17.89■□□□□ 0.45
COMMD4-210ENST00000564587 CEBPZQ03701 1054 aaKnown RBP17.89■□□□□ 0.45
COMMD4-210ENST00000564587 DCAF4Q8WV16 495 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms