RNA–Protein interactions for RNA: ENST00000558415.5

SPG21-206, Transcript of SPG21, maspardin, humanhuman

TSL 3

Gene SPG21, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-206ENST00000558415 SHISA4Q96DD7 197 aa17.14■□□□□ 0.33
SPG21-206ENST00000558415 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.14■□□□□ 0.33
SPG21-206ENST00000558415 UNC93B1Q9H1C4 597 aa17.14■□□□□ 0.33
SPG21-206ENST00000558415 ARHGEF10LQ9HCE6 1279 aa17.14■□□□□ 0.33
SPG21-206ENST00000558415 TMX2Q9Y320 296 aa17.14■□□□□ 0.33
SPG21-206ENST00000558415 EEF2P13639 858 aaKnown RBP17.13■□□□□ 0.33
SPG21-206ENST00000558415 UBXN2AP68543 259 aa17.13■□□□□ 0.33
SPG21-206ENST00000558415 LBX2Q6XYB7 198 aa17.13■□□□□ 0.33
SPG21-206ENST00000558415 SPICE1Q8N0Z3 855 aa17.13■□□□□ 0.33
SPG21-206ENST00000558415 EVI5LQ96CN4 794 aa17.13■□□□□ 0.33
SPG21-206ENST00000558415 TANGO6Q9C0B7 1094 aa17.13■□□□□ 0.33
SPG21-206ENST00000558415 RNF208Q9H0X6 261 aa17.13■□□□□ 0.33
SPG21-206ENST00000558415 BTBD7Q9P203 1132 aa17.13■□□□□ 0.33
SPG21-206ENST00000558415 RABGAP1Q9Y3P9 1069 aa17.13■□□□□ 0.33
SPG21-206ENST00000558415 FOXP2O15409 715 aa17.12■□□□□ 0.33
SPG21-206ENST00000558415 MAPK4P31152 587 aa17.12■□□□□ 0.33
SPG21-206ENST00000558415 ATP2B2Q01814 1243 aa17.12■□□□□ 0.33
SPG21-206ENST00000558415 CHD1LQ86WJ1 897 aa17.12■□□□□ 0.33
SPG21-206ENST00000558415 VCPKMTQ9H867 229 aa17.12■□□□□ 0.33
SPG21-206ENST00000558415 KANSL2Q9H9L4 492 aa17.12■□□□□ 0.33
SPG21-206ENST00000558415 MYH4Q9Y623 1939 aa17.11■□□□□ 0.33
SPG21-206ENST00000558415 PRDM1O75626 825 aa17.11■□□□□ 0.33
SPG21-206ENST00000558415 IRX6P78412 446 aaPredicted RBP17.11■□□□□ 0.33
SPG21-206ENST00000558415 NUCB1Q02818 461 aa17.11■□□□□ 0.33
SPG21-206ENST00000558415 GPR142Q7Z601 462 aa17.11■□□□□ 0.33
SPG21-206ENST00000558415 LPAR1Q92633 364 aa17.11■□□□□ 0.33
SPG21-206ENST00000558415 SH2D4AQ9H788 454 aa17.11■□□□□ 0.33
SPG21-206ENST00000558415 MKNK2Q9HBH9 465 aa17.11■□□□□ 0.33
SPG21-206ENST00000558415 COL11A1P12107 1806 aaPredicted RBP17.1■□□□□ 0.33
SPG21-206ENST00000558415 GJB1P08034 283 aa17.1■□□□□ 0.33
SPG21-206ENST00000558415 CYP2B6P20813 491 aa17.1■□□□□ 0.33
SPG21-206ENST00000558415 TRIM32Q13049 653 aa17.1■□□□□ 0.33
SPG21-206ENST00000558415 COG2Q14746 738 aa17.1■□□□□ 0.33
SPG21-206ENST00000558415 PLEKHH3Q7Z736 793 aa17.1■□□□□ 0.33
SPG21-206ENST00000558415 PLEKHM2Q8IWE5 1019 aa17.1■□□□□ 0.33
SPG21-206ENST00000558415 CCAR1Q8IX12 1150 aaKnown RBP17.1■□□□□ 0.33
SPG21-206ENST00000558415 USP6NLQ92738 828 aa17.1■□□□□ 0.33
SPG21-206ENST00000558415 FAM227BQ96M60 508 aa17.1■□□□□ 0.33
SPG21-206ENST00000558415 NACAP1Q9BZK3 213 aa17.1■□□□□ 0.33
SPG21-206ENST00000558415 NAPBQ9H115 298 aa17.1■□□□□ 0.33
SPG21-206ENST00000558415 A0A0D9SFI3 127 aa17.09■□□□□ 0.33
SPG21-206ENST00000558415 HMGCRP04035 888 aa17.09■□□□□ 0.33
SPG21-206ENST00000558415 GJA8P48165 433 aa17.09■□□□□ 0.33
SPG21-206ENST00000558415 MORN1Q5T089 497 aa17.09■□□□□ 0.33
SPG21-206ENST00000558415 VPS53Q5VIR6 699 aa17.09■□□□□ 0.33
SPG21-206ENST00000558415 U2AF1L4Q8WU68 220 aaKnown RBP17.09■□□□□ 0.33
SPG21-206ENST00000558415 SOCS4Q8WXH5 440 aa17.09■□□□□ 0.33
SPG21-206ENST00000558415 TRIB2Q92519 343 aa17.09■□□□□ 0.33
SPG21-206ENST00000558415 NUDT12Q9BQG2 462 aa17.09■□□□□ 0.33
SPG21-206ENST00000558415 IGKV6D-41A0A0C4DH26 115 aa17.08■□□□□ 0.32
SPG21-206ENST00000558415 WDR46O15213 610 aaKnown RBP17.08■□□□□ 0.32
SPG21-206ENST00000558415 FLOT1O75955 427 aa17.08■□□□□ 0.32
SPG21-206ENST00000558415 DSG3P32926 999 aa17.08■□□□□ 0.32
SPG21-206ENST00000558415 CCNA1P78396 465 aa17.08■□□□□ 0.32
SPG21-206ENST00000558415 PPARAQ07869 468 aa17.08■□□□□ 0.32
SPG21-206ENST00000558415 NKX2-3Q8TAU0 364 aa17.08■□□□□ 0.32
SPG21-206ENST00000558415 ATG4CQ96DT6 458 aa17.08■□□□□ 0.32
SPG21-206ENST00000558415 PAK6Q9NQU5 681 aaPredicted RBP17.08■□□□□ 0.32
SPG21-206ENST00000558415 HELLSQ9NRZ9 838 aa17.08■□□□□ 0.32
SPG21-206ENST00000558415 HOXC10Q9NYD6 342 aa17.08■□□□□ 0.32
SPG21-206ENST00000558415 TRIM6-TRIM34B2RNG4 842 aa17.07■□□□□ 0.32
SPG21-206ENST00000558415 RAD21O60216 631 aa17.07■□□□□ 0.32
SPG21-206ENST00000558415 NMIQ13287 307 aaPredicted RBP17.07■□□□□ 0.32
SPG21-206ENST00000558415 CCL14Q16627 93 aa17.07■□□□□ 0.32
SPG21-206ENST00000558415 WDR78Q5VTH9 848 aa17.07■□□□□ 0.32
SPG21-206ENST00000558415 PRPF38BQ5VTL8 546 aaKnown RBP17.07■□□□□ 0.32
SPG21-206ENST00000558415 SAMD1Q6SPF0 538 aaPredicted RBP17.07■□□□□ 0.32
SPG21-206ENST00000558415 DEFB118Q96PH6 123 aa17.07■□□□□ 0.32
SPG21-206ENST00000558415 OSBPL3Q9H4L5 887 aa17.07■□□□□ 0.32
SPG21-206ENST00000558415 CWC22Q9HCG8 908 aaKnown RBP17.07■□□□□ 0.32
SPG21-206ENST00000558415 GOPCQ9HD26 462 aa17.07■□□□□ 0.32
SPG21-206ENST00000558415 FBXO28Q9NVF7 368 aa17.07■□□□□ 0.32
SPG21-206ENST00000558415 PLIN4Q96Q06 1357 aa17.06■□□□□ 0.32
SPG21-206ENST00000558415 SGPL1O95470 568 aa17.06■□□□□ 0.32
SPG21-206ENST00000558415 XRCC5P13010 732 aaKnown RBP17.06■□□□□ 0.32
SPG21-206ENST00000558415 RGS2P41220 211 aa17.06■□□□□ 0.32
SPG21-206ENST00000558415 CTDSPL2Q05D32 466 aa17.06■□□□□ 0.32
SPG21-206ENST00000558415 FAM83BQ5T0W9 1011 aa17.06■□□□□ 0.32
SPG21-206ENST00000558415 ZNF589Q86UQ0 364 aaPredicted RBP17.06■□□□□ 0.32
SPG21-206ENST00000558415 ZNF444Q8N0Y2 327 aaPredicted RBP17.06■□□□□ 0.32
SPG21-206ENST00000558415 RILPL2Q969X0 211 aa17.06■□□□□ 0.32
SPG21-206ENST00000558415 MOV10L1Q9BXT6 1211 aaKnown RBP17.06■□□□□ 0.32
SPG21-206ENST00000558415 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.06■□□□□ 0.32
SPG21-206ENST00000558415 ZNF287Q9HBT7 754 aa17.06■□□□□ 0.32
SPG21-206ENST00000558415 NYAP2Q9P242 653 aa17.06■□□□□ 0.32
SPG21-206ENST00000558415 TACC3Q9Y6A5 838 aa17.06■□□□□ 0.32
SPG21-206ENST00000558415 ZNF236Q9UL36 1845 aa17.05■□□□□ 0.32
SPG21-206ENST00000558415 CEP290O15078 2479 aa17.05■□□□□ 0.32
SPG21-206ENST00000558415 SLC15A5A6NIM6 579 aa17.05■□□□□ 0.32
SPG21-206ENST00000558415 ZKSCAN1P17029 563 aaPredicted RBP17.05■□□□□ 0.32
SPG21-206ENST00000558415 PDE4BQ07343 736 aa17.05■□□□□ 0.32
SPG21-206ENST00000558415 MAP2K5Q13163 448 aa17.05■□□□□ 0.32
SPG21-206ENST00000558415 MCMDC2Q4G0Z9 681 aa17.05■□□□□ 0.32
SPG21-206ENST00000558415 FAM47AQ5JRC9 791 aa17.05■□□□□ 0.32
SPG21-206ENST00000558415 UBE2Q1Q7Z7E8 422 aa17.05■□□□□ 0.32
SPG21-206ENST00000558415 MB21D1Q8N884 522 aa17.05■□□□□ 0.32
SPG21-206ENST00000558415 CEP95Q96GE4 821 aa17.05■□□□□ 0.32
SPG21-206ENST00000558415 NUP88Q99567 741 aaPredicted RBP17.05■□□□□ 0.32
SPG21-206ENST00000558415 APBA2Q99767 749 aa17.05■□□□□ 0.32
SPG21-206ENST00000558415 SPATC1LQ9H0A9 340 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms