RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 INHAP05111 366 aa19.77■□□□□ 0.76
VSX1-207ENST00000557285 EEF2P13639 858 aaKnown RBP19.77■□□□□ 0.76
VSX1-207ENST00000557285 CHD1LQ86WJ1 897 aa19.77■□□□□ 0.76
VSX1-207ENST00000557285 SIAH1Q8IUQ4 282 aa19.77■□□□□ 0.76
VSX1-207ENST00000557285 IFNL3Q8IZI9 196 aa19.77■□□□□ 0.76
VSX1-207ENST00000557285 GTF3C2Q8WUA4 911 aaPredicted RBP19.77■□□□□ 0.76
VSX1-207ENST00000557285 RILPL2Q969X0 211 aa19.77■□□□□ 0.76
VSX1-207ENST00000557285 UNC93B1Q9H1C4 597 aa19.77■□□□□ 0.76
VSX1-207ENST00000557285 PORCNQ9H237 461 aa19.77■□□□□ 0.76
VSX1-207ENST00000557285 PLXNB2O15031 1838 aa19.76■□□□□ 0.75
VSX1-207ENST00000557285 CYP2B6P20813 491 aa19.76■□□□□ 0.75
VSX1-207ENST00000557285 IRF5Q13568 498 aa19.76■□□□□ 0.75
VSX1-207ENST00000557285 NAPBQ9H115 298 aa19.76■□□□□ 0.75
VSX1-207ENST00000557285 SH2D4AQ9H788 454 aa19.76■□□□□ 0.75
VSX1-207ENST00000557285 SPDYE16A6NNV3 312 aaPredicted RBP19.75■□□□□ 0.75
VSX1-207ENST00000557285 CNMDO75829 334 aa19.75■□□□□ 0.75
VSX1-207ENST00000557285 RASA1P20936 1047 aa19.75■□□□□ 0.75
VSX1-207ENST00000557285 NUCB1Q02818 461 aa19.75■□□□□ 0.75
VSX1-207ENST00000557285 KANSL2Q9H9L4 492 aa19.75■□□□□ 0.75
VSX1-207ENST00000557285 BTBD7Q9P203 1132 aa19.75■□□□□ 0.75
VSX1-207ENST00000557285 TMX2Q9Y320 296 aa19.75■□□□□ 0.75
VSX1-207ENST00000557285 ROBO3Q96MS0 1386 aa19.74■□□□□ 0.75
VSX1-207ENST00000557285 FLOT1O75955 427 aa19.74■□□□□ 0.75
VSX1-207ENST00000557285 MAPK4P31152 587 aa19.74■□□□□ 0.75
VSX1-207ENST00000557285 PXYLP1Q8TE99 480 aa19.74■□□□□ 0.75
VSX1-207ENST00000557285 FAM227BQ96M60 508 aa19.74■□□□□ 0.75
VSX1-207ENST00000557285 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.74■□□□□ 0.75
VSX1-207ENST00000557285 VCPKMTQ9H867 229 aa19.74■□□□□ 0.75
VSX1-207ENST00000557285 GJD2Q9UKL4 321 aa19.74■□□□□ 0.75
VSX1-207ENST00000557285 RABGAP1Q9Y3P9 1069 aa19.74■□□□□ 0.75
VSX1-207ENST00000557285 CCNA1P78396 465 aa19.73■□□□□ 0.75
VSX1-207ENST00000557285 COG2Q14746 738 aa19.73■□□□□ 0.75
VSX1-207ENST00000557285 GPR142Q7Z601 462 aa19.73■□□□□ 0.75
VSX1-207ENST00000557285 ZNF444Q8N0Y2 327 aaPredicted RBP19.73■□□□□ 0.75
VSX1-207ENST00000557285 LPAR1Q92633 364 aa19.73■□□□□ 0.75
VSX1-207ENST00000557285 NUDT12Q9BQG2 462 aa19.73■□□□□ 0.75
VSX1-207ENST00000557285 A0A0D9SFI3 127 aa19.72■□□□□ 0.75
VSX1-207ENST00000557285 PPARAQ07869 468 aa19.72■□□□□ 0.75
VSX1-207ENST00000557285 TRIM32Q13049 653 aa19.72■□□□□ 0.75
VSX1-207ENST00000557285 PLS1Q14651 629 aa19.72■□□□□ 0.75
VSX1-207ENST00000557285 VPS53Q5VIR6 699 aa19.72■□□□□ 0.75
VSX1-207ENST00000557285 PLEKHH3Q7Z736 793 aa19.72■□□□□ 0.75
VSX1-207ENST00000557285 PLEKHM2Q8IWE5 1019 aa19.72■□□□□ 0.75
VSX1-207ENST00000557285 SOCS4Q8WXH5 440 aa19.72■□□□□ 0.75
VSX1-207ENST00000557285 SHISA4Q96DD7 197 aa19.72■□□□□ 0.75
VSX1-207ENST00000557285 GOPCQ9HD26 462 aa19.72■□□□□ 0.75
VSX1-207ENST00000557285 GREB1LQ9C091 1923 aaPredicted RBP19.72■□□□□ 0.75
VSX1-207ENST00000557285 MYH4Q9Y623 1939 aa19.72■□□□□ 0.75
VSX1-207ENST00000557285 RLFQ13129 1914 aa19.71■□□□□ 0.75
VSX1-207ENST00000557285 SLC3A2P08195 630 aaKnown RBP19.71■□□□□ 0.75
VSX1-207ENST00000557285 CTDSPL2Q05D32 466 aa19.71■□□□□ 0.75
VSX1-207ENST00000557285 NMIQ13287 307 aaPredicted RBP19.71■□□□□ 0.75
VSX1-207ENST00000557285 FAM47AQ5JRC9 791 aa19.71■□□□□ 0.75
VSX1-207ENST00000557285 ATG4CQ96DT6 458 aa19.71■□□□□ 0.75
VSX1-207ENST00000557285 ZNF287Q9HBT7 754 aa19.71■□□□□ 0.75
VSX1-207ENST00000557285 HOXC10Q9NYD6 342 aa19.71■□□□□ 0.75
VSX1-207ENST00000557285 WDR46O15213 610 aaKnown RBP19.7■□□□□ 0.74
VSX1-207ENST00000557285 FOXP2O15409 715 aa19.7■□□□□ 0.74
VSX1-207ENST00000557285 HMGCRP04035 888 aa19.7■□□□□ 0.74
VSX1-207ENST00000557285 GJB1P08034 283 aa19.7■□□□□ 0.74
VSX1-207ENST00000557285 PDE4BQ07343 736 aa19.7■□□□□ 0.74
VSX1-207ENST00000557285 FAM83BQ5T0W9 1011 aa19.7■□□□□ 0.74
VSX1-207ENST00000557285 TRIB2Q92519 343 aa19.7■□□□□ 0.74
VSX1-207ENST00000557285 DEFB118Q96PH6 123 aa19.7■□□□□ 0.74
VSX1-207ENST00000557285 NUP88Q99567 741 aaPredicted RBP19.7■□□□□ 0.74
VSX1-207ENST00000557285 HELLSQ9NRZ9 838 aa19.7■□□□□ 0.74
VSX1-207ENST00000557285 FBXO28Q9NVF7 368 aa19.7■□□□□ 0.74
VSX1-207ENST00000557285 CLIP2Q9UDT6 1046 aa19.7■□□□□ 0.74
VSX1-207ENST00000557285 PARP14Q460N5 1801 aa19.69■□□□□ 0.74
VSX1-207ENST00000557285 TSPY3P0CV98 308 aa19.69■□□□□ 0.74
VSX1-207ENST00000557285 TSPY8P0CW00 308 aa19.69■□□□□ 0.74
VSX1-207ENST00000557285 ZKSCAN1P17029 563 aaPredicted RBP19.69■□□□□ 0.74
VSX1-207ENST00000557285 RGS2P41220 211 aa19.69■□□□□ 0.74
VSX1-207ENST00000557285 GJA8P48165 433 aa19.69■□□□□ 0.74
VSX1-207ENST00000557285 MCMDC2Q4G0Z9 681 aa19.69■□□□□ 0.74
VSX1-207ENST00000557285 LBX2Q6XYB7 198 aa19.69■□□□□ 0.74
VSX1-207ENST00000557285 NKX2-3Q8TAU0 364 aa19.69■□□□□ 0.74
VSX1-207ENST00000557285 U2AF1L4Q8WU68 220 aaKnown RBP19.69■□□□□ 0.74
VSX1-207ENST00000557285 CHMP4CQ96CF2 233 aa19.69■□□□□ 0.74
VSX1-207ENST00000557285 CEP95Q96GE4 821 aa19.69■□□□□ 0.74
VSX1-207ENST00000557285 INCENPQ9NQS7 918 aa19.69■□□□□ 0.74
VSX1-207ENST00000557285 IVNS1ABPQ9Y6Y0 642 aa19.69■□□□□ 0.74
VSX1-207ENST00000557285 COL11A1P12107 1806 aaPredicted RBP19.69■□□□□ 0.74
VSX1-207ENST00000557285 A0A0G2JMZ2 1700 aa19.68■□□□□ 0.74
VSX1-207ENST00000557285 TFRCP02786 760 aaKnown RBP19.68■□□□□ 0.74
VSX1-207ENST00000557285 DSG3P32926 999 aa19.68■□□□□ 0.74
VSX1-207ENST00000557285 TFAP4Q01664 338 aa19.68■□□□□ 0.74
VSX1-207ENST00000557285 CCL14Q16627 93 aa19.68■□□□□ 0.74
VSX1-207ENST00000557285 MORN1Q5T089 497 aa19.68■□□□□ 0.74
VSX1-207ENST00000557285 ZNF589Q86UQ0 364 aaPredicted RBP19.68■□□□□ 0.74
VSX1-207ENST00000557285 LRRC47Q8N1G4 583 aaKnown RBP19.68■□□□□ 0.74
VSX1-207ENST00000557285 MOV10L1Q9BXT6 1211 aaKnown RBP19.68■□□□□ 0.74
VSX1-207ENST00000557285 SPATC1LQ9H0A9 340 aa19.68■□□□□ 0.74
VSX1-207ENST00000557285 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.68■□□□□ 0.74
VSX1-207ENST00000557285 ISY1Q9ULR0 285 aaKnown RBP19.68■□□□□ 0.74
VSX1-207ENST00000557285 APBA2Q99767 749 aa19.67■□□□□ 0.74
VSX1-207ENST00000557285 NYAP2Q9P242 653 aa19.67■□□□□ 0.74
VSX1-207ENST00000557285 SGPL1O95470 568 aa19.66■□□□□ 0.74
VSX1-207ENST00000557285 NDUFB10O96000 172 aa19.66■□□□□ 0.74
VSX1-207ENST00000557285 PRKAR2AP13861 404 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms