RNA–Protein interactions for RNA: ENST00000544299.5

CHERP-202, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-202ENST00000544299 CERKLQ49MI3 558 aaPredicted RBP21■□□□□ 0.95
CHERP-202ENST00000544299 TRIM34Q9BYJ4 488 aa21■□□□□ 0.95
CHERP-202ENST00000544299 GZF1Q9H116 711 aaPredicted RBP21■□□□□ 0.95
CHERP-202ENST00000544299 ZSCAN16Q9H4T2 348 aaPredicted RBP21■□□□□ 0.95
CHERP-202ENST00000544299 MYH4Q9Y623 1939 aa21■□□□□ 0.95
CHERP-202ENST00000544299 PALM3A6NDB9 673 aaPredicted RBP21■□□□□ 0.95
CHERP-202ENST00000544299 KIF5BP33176 963 aa21■□□□□ 0.95
CHERP-202ENST00000544299 KIF4BQ2VIQ3 1234 aa21■□□□□ 0.95
CHERP-202ENST00000544299 KRT40Q6A162 431 aa21■□□□□ 0.95
CHERP-202ENST00000544299 GPC2Q8N158 579 aa21■□□□□ 0.95
CHERP-202ENST00000544299 SHISA4Q96DD7 197 aa21■□□□□ 0.95
CHERP-202ENST00000544299 HERC5Q9UII4 1024 aaKnown RBP21■□□□□ 0.95
CHERP-202ENST00000544299 MPHOSPH10O00566 681 aaKnown RBP20.99■□□□□ 0.95
CHERP-202ENST00000544299 PRPF40AO75400 957 aaKnown RBP20.99■□□□□ 0.95
CHERP-202ENST00000544299 TTLL1O95922 423 aa20.99■□□□□ 0.95
CHERP-202ENST00000544299 WASF1Q92558 559 aa20.99■□□□□ 0.95
CHERP-202ENST00000544299 GPRC5DQ9NZD1 345 aa20.99■□□□□ 0.95
CHERP-202ENST00000544299 KIF28PB7ZC32 967 aa20.98■□□□□ 0.95
CHERP-202ENST00000544299 KIF23Q02241 960 aaPredicted RBP20.98■□□□□ 0.95
CHERP-202ENST00000544299 LRRC47Q8N1G4 583 aaKnown RBP20.98■□□□□ 0.95
CHERP-202ENST00000544299 RNF181Q9P0P0 153 aa20.98■□□□□ 0.95
CHERP-202ENST00000544299 V9GY48 417 aaPredicted RBP20.98■□□□□ 0.95
CHERP-202ENST00000544299 hCG_1642624A0A1W2PR95 340 aa20.97■□□□□ 0.95
CHERP-202ENST00000544299 GDF11O95390 407 aa20.97■□□□□ 0.95
CHERP-202ENST00000544299 USP48Q86UV5 1035 aa20.97■□□□□ 0.95
CHERP-202ENST00000544299 TRPM4Q8TD43 1214 aa20.97■□□□□ 0.95
CHERP-202ENST00000544299 TEPSINQ96N21 525 aa20.97■□□□□ 0.95
CHERP-202ENST00000544299 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.97■□□□□ 0.95
CHERP-202ENST00000544299 CLIP2Q9UDT6 1046 aa20.97■□□□□ 0.95
CHERP-202ENST00000544299 SCAF8Q9UPN6 1271 aaKnown RBP20.97■□□□□ 0.95
CHERP-202ENST00000544299 MTMR7Q9Y216 660 aa20.97■□□□□ 0.95
CHERP-202ENST00000544299 RASA3Q14644 834 aa20.97■□□□□ 0.95
CHERP-202ENST00000544299 SEPT2Q15019 361 aa20.97■□□□□ 0.95
CHERP-202ENST00000544299 SIAH1Q8IUQ4 282 aa20.97■□□□□ 0.95
CHERP-202ENST00000544299 BAZ2BQ9UIF8 2168 aaKnown RBP20.96■□□□□ 0.95
CHERP-202ENST00000544299 USP17L5A8MUK1 530 aa20.96■□□□□ 0.95
CHERP-202ENST00000544299 FIBPO43427 364 aa20.96■□□□□ 0.95
CHERP-202ENST00000544299 TBC1D12O60347 775 aa20.96■□□□□ 0.95
CHERP-202ENST00000544299 SNHG28P0DPA3 235 aa20.96■□□□□ 0.95
CHERP-202ENST00000544299 GNAQP50148 359 aa20.96■□□□□ 0.95
CHERP-202ENST00000544299 MAP3K10Q02779 954 aa20.96■□□□□ 0.95
CHERP-202ENST00000544299 ABCB5Q2M3G0 1257 aa20.96■□□□□ 0.95
CHERP-202ENST00000544299 TMEM179Q6ZVK1 233 aa20.96■□□□□ 0.95
CHERP-202ENST00000544299 NYAP2Q9P242 653 aa20.96■□□□□ 0.95
CHERP-202ENST00000544299 HACL1Q9UJ83 578 aa20.96■□□□□ 0.95
CHERP-202ENST00000544299 H7C1D1 291 aa20.95■□□□□ 0.94
CHERP-202ENST00000544299 CYTH3O43739 400 aa20.95■□□□□ 0.94
CHERP-202ENST00000544299 PDHBP11177 359 aa20.95■□□□□ 0.94
CHERP-202ENST00000544299 NCLP19338 710 aaKnown RBP20.95■□□□□ 0.94
CHERP-202ENST00000544299 KRT85P78386 507 aa20.95■□□□□ 0.94
CHERP-202ENST00000544299 C9orf131Q5VYM1 1079 aa20.95■□□□□ 0.94
CHERP-202ENST00000544299 USP17L2Q6R6M4 530 aa20.95■□□□□ 0.94
CHERP-202ENST00000544299 KANSL2Q9H9L4 492 aa20.95■□□□□ 0.94
CHERP-202ENST00000544299 GH2P01242 217 aa20.95■□□□□ 0.94
CHERP-202ENST00000544299 PARP1P09874 1014 aaKnown RBP20.95■□□□□ 0.94
CHERP-202ENST00000544299 GOLGA8HP0CJ92 632 aa20.95■□□□□ 0.94
CHERP-202ENST00000544299 EPS15P42566 896 aa20.95■□□□□ 0.94
CHERP-202ENST00000544299 TNNI2P48788 182 aa20.95■□□□□ 0.94
CHERP-202ENST00000544299 AKAP17AQ02040 695 aaKnown RBP20.95■□□□□ 0.94
CHERP-202ENST00000544299 CSPP1Q1MSJ5 1256 aa20.95■□□□□ 0.94
CHERP-202ENST00000544299 PPP4R3BQ5MIZ7 849 aa20.95■□□□□ 0.94
CHERP-202ENST00000544299 MKL1Q969V6 931 aa20.95■□□□□ 0.94
CHERP-202ENST00000544299 GADD45BO75293 160 aaPredicted RBP20.94■□□□□ 0.94
CHERP-202ENST00000544299 EEF2P13639 858 aaKnown RBP20.94■□□□□ 0.94
CHERP-202ENST00000544299 ZNF445P59923 1031 aa20.94■□□□□ 0.94
CHERP-202ENST00000544299 TNFAIP1Q13829 316 aa20.94■□□□□ 0.94
CHERP-202ENST00000544299 GPT2Q8TD30 523 aa20.94■□□□□ 0.94
CHERP-202ENST00000544299 LZTS2Q9BRK4 669 aa20.94■□□□□ 0.94
CHERP-202ENST00000544299 GRPEL1Q9HAV7 217 aa20.94■□□□□ 0.94
CHERP-202ENST00000544299 TFIP11Q9UBB9 837 aaKnown RBP20.94■□□□□ 0.94
CHERP-202ENST00000544299 KCNJ14Q9UNX9 436 aa20.94■□□□□ 0.94
CHERP-202ENST00000544299 KLRF2D3W0D1 207 aa20.93■□□□□ 0.94
CHERP-202ENST00000544299 DDNO94850 711 aaPredicted RBP20.93■□□□□ 0.94
CHERP-202ENST00000544299 MMP1P03956 469 aa20.93■□□□□ 0.94
CHERP-202ENST00000544299 VEGFAP15692 232 aaPredicted RBP20.93■□□□□ 0.94
CHERP-202ENST00000544299 TRIM29Q14134 588 aa20.93■□□□□ 0.94
CHERP-202ENST00000544299 SPZ1Q9BXG8 430 aa20.93■□□□□ 0.94
CHERP-202ENST00000544299 CPVLQ9H3G5 476 aa20.93■□□□□ 0.94
CHERP-202ENST00000544299 VPS54Q9P1Q0 977 aa20.93■□□□□ 0.94
CHERP-202ENST00000544299 HIRAP54198 1017 aaPredicted RBP20.92■□□□□ 0.94
CHERP-202ENST00000544299 ICA1Q05084 483 aa20.92■□□□□ 0.94
CHERP-202ENST00000544299 PFKFB3Q16875 520 aaPredicted RBP20.92■□□□□ 0.94
CHERP-202ENST00000544299 MIGA2Q7L4E1 593 aa20.92■□□□□ 0.94
CHERP-202ENST00000544299 BRAPQ7Z569 592 aa20.92■□□□□ 0.94
CHERP-202ENST00000544299 SYAP1Q96A49 352 aaPredicted RBP20.92■□□□□ 0.94
CHERP-202ENST00000544299 SCG2P13521 617 aa20.92■□□□□ 0.94
CHERP-202ENST00000544299 U2AF2P26368 475 aaKnown RBP eCLIP20.92■□□□□ 0.94
CHERP-202ENST00000544299 ATP2B2Q01814 1243 aa20.92■□□□□ 0.94
CHERP-202ENST00000544299 PIBF1Q8WXW3 757 aa20.92■□□□□ 0.94
CHERP-202ENST00000544299 FTOQ9C0B1 505 aaKnown RBP eCLIP20.92■□□□□ 0.94
CHERP-202ENST00000544299 RBM27Q9P2N5 1060 aaKnown RBP20.92■□□□□ 0.94
CHERP-202ENST00000544299 FRMPD2Q68DX3 1309 aaPredicted RBP20.92■□□□□ 0.94
CHERP-202ENST00000544299 XRCC6P12956 609 aaKnown RBP eCLIP20.91■□□□□ 0.94
CHERP-202ENST00000544299 ZNF543Q08ER8 600 aa20.91■□□□□ 0.94
CHERP-202ENST00000544299 ASPRV1Q53RT3 343 aa20.91■□□□□ 0.94
CHERP-202ENST00000544299 LEO1Q8WVC0 666 aaPredicted RBP20.91■□□□□ 0.94
CHERP-202ENST00000544299 PHF20Q9BVI0 1012 aa20.91■□□□□ 0.94
CHERP-202ENST00000544299 SMARCA1P28370 1054 aa20.9■□□□□ 0.94
CHERP-202ENST00000544299 NPY5RQ15761 445 aa20.9■□□□□ 0.94
CHERP-202ENST00000544299 ANGEL2Q5VTE6 544 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms