RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 PDE4BQ07343 736 aa22.76■■□□□ 1.23
SPPL3-208ENST00000543854 PPARAQ07869 468 aa22.76■■□□□ 1.23
SPPL3-208ENST00000543854 MCMDC2Q4G0Z9 681 aa22.76■■□□□ 1.23
SPPL3-208ENST00000543854 SIAH1Q8IUQ4 282 aa22.76■■□□□ 1.23
SPPL3-208ENST00000543854 CCAR1Q8IX12 1150 aaKnown RBP22.76■■□□□ 1.23
SPPL3-208ENST00000543854 VCPKMTQ9H867 229 aa22.76■■□□□ 1.23
SPPL3-208ENST00000543854 RABGAP1Q9Y3P9 1069 aa22.76■■□□□ 1.23
SPPL3-208ENST00000543854 A0A0G2JMZ2 1700 aa22.75■■□□□ 1.23
SPPL3-208ENST00000543854 FOXP2O15409 715 aa22.75■■□□□ 1.23
SPPL3-208ENST00000543854 ADCY3O60266 1144 aa22.75■■□□□ 1.23
SPPL3-208ENST00000543854 PEX10O60683 326 aa22.75■■□□□ 1.23
SPPL3-208ENST00000543854 NMIQ13287 307 aaPredicted RBP22.75■■□□□ 1.23
SPPL3-208ENST00000543854 LBX2Q6XYB7 198 aa22.75■■□□□ 1.23
SPPL3-208ENST00000543854 ZNF444Q8N0Y2 327 aaPredicted RBP22.75■■□□□ 1.23
SPPL3-208ENST00000543854 SPICE1Q8N0Z3 855 aa22.75■■□□□ 1.23
SPPL3-208ENST00000543854 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.75■■□□□ 1.23
SPPL3-208ENST00000543854 GOPCQ9HD26 462 aa22.75■■□□□ 1.23
SPPL3-208ENST00000543854 BIN2Q9UBW5 565 aaPredicted RBP22.75■■□□□ 1.23
SPPL3-208ENST00000543854 DOCK3Q8IZD9 2030 aa22.75■■□□□ 1.23
SPPL3-208ENST00000543854 SPDYE16A6NNV3 312 aaPredicted RBP22.74■■□□□ 1.23
SPPL3-208ENST00000543854 WDR46O15213 610 aaKnown RBP22.74■■□□□ 1.23
SPPL3-208ENST00000543854 PRDM1O75626 825 aa22.74■■□□□ 1.23
SPPL3-208ENST00000543854 MAPK4P31152 587 aa22.74■■□□□ 1.23
SPPL3-208ENST00000543854 UBXN2AP68543 259 aa22.74■■□□□ 1.23
SPPL3-208ENST00000543854 CCNA1P78396 465 aa22.74■■□□□ 1.23
SPPL3-208ENST00000543854 KIAA1755Q5JYT7 1200 aa22.74■■□□□ 1.23
SPPL3-208ENST00000543854 VPS53Q5VIR6 699 aa22.74■■□□□ 1.23
SPPL3-208ENST00000543854 SOCS4Q8WXH5 440 aa22.74■■□□□ 1.23
SPPL3-208ENST00000543854 PLIN4Q96Q06 1357 aa22.74■■□□□ 1.23
SPPL3-208ENST00000543854 SDSP20132 328 aa22.73■■□□□ 1.23
SPPL3-208ENST00000543854 POTEEQ6S8J3 1075 aa22.73■■□□□ 1.23
SPPL3-208ENST00000543854 PXYLP1Q8TE99 480 aa22.73■■□□□ 1.23
SPPL3-208ENST00000543854 CWC22Q9HCG8 908 aaKnown RBP22.73■■□□□ 1.23
SPPL3-208ENST00000543854 DIAPH3Q9NSV4 1193 aa22.73■■□□□ 1.23
SPPL3-208ENST00000543854 CCDC171Q6TFL3 1326 aa22.73■■□□□ 1.23
SPPL3-208ENST00000543854 FLOT1O75955 427 aa22.72■■□□□ 1.23
SPPL3-208ENST00000543854 ELNP15502 786 aa22.72■■□□□ 1.23
SPPL3-208ENST00000543854 MFAP1P55081 439 aaKnown RBP22.72■■□□□ 1.23
SPPL3-208ENST00000543854 COG2Q14746 738 aa22.72■■□□□ 1.23
SPPL3-208ENST00000543854 ZNF589Q86UQ0 364 aaPredicted RBP22.72■■□□□ 1.23
SPPL3-208ENST00000543854 PORCNQ9H237 461 aa22.72■■□□□ 1.23
SPPL3-208ENST00000543854 HOXC10Q9NYD6 342 aa22.72■■□□□ 1.23
SPPL3-208ENST00000543854 PLXNB2O15031 1838 aa22.72■■□□□ 1.23
SPPL3-208ENST00000543854 PARP14Q460N5 1801 aa22.72■■□□□ 1.23
SPPL3-208ENST00000543854 TNRC18O15417 2968 aaPredicted RBP22.72■■□□□ 1.23
SPPL3-208ENST00000543854 RLFQ13129 1914 aa22.72■■□□□ 1.23
SPPL3-208ENST00000543854 MYH4Q9Y623 1939 aa22.72■■□□□ 1.23
SPPL3-208ENST00000543854 MKI67P46013 3256 aaKnown RBP22.72■■□□□ 1.23
SPPL3-208ENST00000543854 HIP1O00291 1037 aa22.71■■□□□ 1.23
SPPL3-208ENST00000543854 RAD21O60216 631 aa22.71■■□□□ 1.23
SPPL3-208ENST00000543854 CNMDO75829 334 aa22.71■■□□□ 1.23
SPPL3-208ENST00000543854 TSPY3P0CV98 308 aa22.71■■□□□ 1.23
SPPL3-208ENST00000543854 TSPY8P0CW00 308 aa22.71■■□□□ 1.23
SPPL3-208ENST00000543854 Q3C1V9 767 aa22.71■■□□□ 1.23
SPPL3-208ENST00000543854 NYAP2Q9P242 653 aa22.71■■□□□ 1.23
SPPL3-208ENST00000543854 ZMYM6O95789 1325 aa22.71■■□□□ 1.23
SPPL3-208ENST00000543854 IGKV6D-41A0A0C4DH26 115 aa22.7■■□□□ 1.22
SPPL3-208ENST00000543854 INHAP05111 366 aa22.7■■□□□ 1.22
SPPL3-208ENST00000543854 PDE4AP27815 886 aa22.7■■□□□ 1.22
SPPL3-208ENST00000543854 MTFR1Q15390 333 aa22.7■■□□□ 1.22
SPPL3-208ENST00000543854 ALX1Q15699 326 aa22.7■■□□□ 1.22
SPPL3-208ENST00000543854 GPR142Q7Z601 462 aa22.7■■□□□ 1.22
SPPL3-208ENST00000543854 CEP95Q96GE4 821 aa22.7■■□□□ 1.22
SPPL3-208ENST00000543854 NUDT12Q9BQG2 462 aa22.7■■□□□ 1.22
SPPL3-208ENST00000543854 BTBD7Q9P203 1132 aa22.7■■□□□ 1.22
SPPL3-208ENST00000543854 GJD2Q9UKL4 321 aa22.7■■□□□ 1.22
SPPL3-208ENST00000543854 CCL5P13501 91 aa22.69■■□□□ 1.22
SPPL3-208ENST00000543854 EN2P19622 333 aaPredicted RBP22.69■■□□□ 1.22
SPPL3-208ENST00000543854 PLEKHH3Q7Z736 793 aa22.69■■□□□ 1.22
SPPL3-208ENST00000543854 MB21D1Q8N884 522 aa22.69■■□□□ 1.22
SPPL3-208ENST00000543854 ANAPC4Q9UJX5 808 aa22.69■■□□□ 1.22
SPPL3-208ENST00000543854 TTLL1O95922 423 aa22.68■■□□□ 1.22
SPPL3-208ENST00000543854 HSPD1P10809 573 aaKnown RBP22.68■■□□□ 1.22
SPPL3-208ENST00000543854 CTDSPL2Q05D32 466 aa22.68■■□□□ 1.22
SPPL3-208ENST00000543854 WDR78Q5VTH9 848 aa22.68■■□□□ 1.22
SPPL3-208ENST00000543854 NEDD1Q8NHV4 660 aa22.68■■□□□ 1.22
SPPL3-208ENST00000543854 MTMR4Q9NYA4 1195 aa22.68■■□□□ 1.22
SPPL3-208ENST00000543854 SYNPO2Q9UMS6 1093 aa22.68■■□□□ 1.22
SPPL3-208ENST00000543854 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.68■■□□□ 1.22
SPPL3-208ENST00000543854 TSPY2A6NKD2 308 aa22.67■■□□□ 1.22
SPPL3-208ENST00000543854 FGAP02671 866 aa22.67■■□□□ 1.22
SPPL3-208ENST00000543854 HMGCRP04035 888 aa22.67■■□□□ 1.22
SPPL3-208ENST00000543854 DSG3P32926 999 aa22.67■■□□□ 1.22
SPPL3-208ENST00000543854 TFAP4Q01664 338 aa22.67■■□□□ 1.22
SPPL3-208ENST00000543854 FAM47AQ5JRC9 791 aa22.67■■□□□ 1.22
SPPL3-208ENST00000543854 FAM83BQ5T0W9 1011 aa22.67■■□□□ 1.22
SPPL3-208ENST00000543854 TTC22Q5TAA0 569 aa22.67■■□□□ 1.22
SPPL3-208ENST00000543854 SAMD1Q6SPF0 538 aaPredicted RBP22.67■■□□□ 1.22
SPPL3-208ENST00000543854 CWC27Q6UX04 472 aaKnown RBP22.67■■□□□ 1.22
SPPL3-208ENST00000543854 ATG4CQ96DT6 458 aa22.67■■□□□ 1.22
SPPL3-208ENST00000543854 RNF208Q9H0X6 261 aa22.67■■□□□ 1.22
SPPL3-208ENST00000543854 CLIP2Q9UDT6 1046 aa22.67■■□□□ 1.22
SPPL3-208ENST00000543854 LAMA4Q16363 1823 aa22.66■■□□□ 1.22
SPPL3-208ENST00000543854 NDUFB10O96000 172 aa22.66■■□□□ 1.22
SPPL3-208ENST00000543854 PPP4R3BQ5MIZ7 849 aa22.66■■□□□ 1.22
SPPL3-208ENST00000543854 LRRC47Q8N1G4 583 aaKnown RBP22.66■■□□□ 1.22
SPPL3-208ENST00000543854 NKX2-3Q8TAU0 364 aa22.66■■□□□ 1.22
SPPL3-208ENST00000543854 SPATC1LQ9H0A9 340 aa22.66■■□□□ 1.22
SPPL3-208ENST00000543854 IVNS1ABPQ9Y6Y0 642 aa22.66■■□□□ 1.22
SPPL3-208ENST00000543854 F5H6K3 240 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms