RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 Q3C1V9 767 aa18.55■□□□□ 0.56
CAPN1-213ENST00000527897 CCL5P13501 91 aa18.54■□□□□ 0.56
CAPN1-213ENST00000527897 EEF2P13639 858 aaKnown RBP18.54■□□□□ 0.56
CAPN1-213ENST00000527897 NUCB1Q02818 461 aa18.54■□□□□ 0.56
CAPN1-213ENST00000527897 IRF5Q13568 498 aa18.54■□□□□ 0.56
CAPN1-213ENST00000527897 KIAA1755Q5JYT7 1200 aa18.54■□□□□ 0.56
CAPN1-213ENST00000527897 RNF208Q9H0X6 261 aa18.54■□□□□ 0.56
CAPN1-213ENST00000527897 KANSL2Q9H9L4 492 aa18.54■□□□□ 0.56
CAPN1-213ENST00000527897 RABGAP1Q9Y3P9 1069 aa18.54■□□□□ 0.56
CAPN1-213ENST00000527897 INHAP05111 366 aa18.53■□□□□ 0.56
CAPN1-213ENST00000527897 CYP2B6P20813 491 aa18.53■□□□□ 0.56
CAPN1-213ENST00000527897 RASA1P20936 1047 aa18.53■□□□□ 0.56
CAPN1-213ENST00000527897 POTEEQ6S8J3 1075 aa18.53■□□□□ 0.56
CAPN1-213ENST00000527897 SIAH1Q8IUQ4 282 aa18.53■□□□□ 0.56
CAPN1-213ENST00000527897 ZNF444Q8N0Y2 327 aaPredicted RBP18.53■□□□□ 0.56
CAPN1-213ENST00000527897 PORCNQ9H237 461 aa18.53■□□□□ 0.56
CAPN1-213ENST00000527897 VCPKMTQ9H867 229 aa18.53■□□□□ 0.56
CAPN1-213ENST00000527897 TMX2Q9Y320 296 aa18.53■□□□□ 0.56
CAPN1-213ENST00000527897 SPDYE16A6NNV3 312 aaPredicted RBP18.52■□□□□ 0.56
CAPN1-213ENST00000527897 CNMDO75829 334 aa18.52■□□□□ 0.56
CAPN1-213ENST00000527897 MAPK4P31152 587 aa18.52■□□□□ 0.56
CAPN1-213ENST00000527897 CCNA1P78396 465 aa18.52■□□□□ 0.56
CAPN1-213ENST00000527897 PLEKHM2Q8IWE5 1019 aa18.52■□□□□ 0.56
CAPN1-213ENST00000527897 FAM227BQ96M60 508 aa18.52■□□□□ 0.56
CAPN1-213ENST00000527897 UNC93B1Q9H1C4 597 aa18.52■□□□□ 0.56
CAPN1-213ENST00000527897 ZNF287Q9HBT7 754 aa18.52■□□□□ 0.56
CAPN1-213ENST00000527897 PDE4DIPQ5VU43 2346 aa18.52■□□□□ 0.56
CAPN1-213ENST00000527897 ROBO3Q96MS0 1386 aa18.52■□□□□ 0.55
CAPN1-213ENST00000527897 FLOT1O75955 427 aa18.51■□□□□ 0.55
CAPN1-213ENST00000527897 SLC3A2P08195 630 aaKnown RBP18.51■□□□□ 0.55
CAPN1-213ENST00000527897 COG2Q14746 738 aa18.51■□□□□ 0.55
CAPN1-213ENST00000527897 GPR142Q7Z601 462 aa18.51■□□□□ 0.55
CAPN1-213ENST00000527897 PXYLP1Q8TE99 480 aa18.51■□□□□ 0.55
CAPN1-213ENST00000527897 LPAR1Q92633 364 aa18.51■□□□□ 0.55
CAPN1-213ENST00000527897 NUDT12Q9BQG2 462 aa18.51■□□□□ 0.55
CAPN1-213ENST00000527897 GOPCQ9HD26 462 aa18.51■□□□□ 0.55
CAPN1-213ENST00000527897 BTBD7Q9P203 1132 aa18.51■□□□□ 0.55
CAPN1-213ENST00000527897 GJD2Q9UKL4 321 aa18.51■□□□□ 0.55
CAPN1-213ENST00000527897 PLXNB2O15031 1838 aa18.51■□□□□ 0.55
CAPN1-213ENST00000527897 A0A0D9SFI3 127 aa18.5■□□□□ 0.55
CAPN1-213ENST00000527897 PDE4BQ07343 736 aa18.5■□□□□ 0.55
CAPN1-213ENST00000527897 PPARAQ07869 468 aa18.5■□□□□ 0.55
CAPN1-213ENST00000527897 NMIQ13287 307 aaPredicted RBP18.5■□□□□ 0.55
CAPN1-213ENST00000527897 PLS1Q14651 629 aa18.5■□□□□ 0.55
CAPN1-213ENST00000527897 VPS53Q5VIR6 699 aa18.5■□□□□ 0.55
CAPN1-213ENST00000527897 PLEKHH3Q7Z736 793 aa18.5■□□□□ 0.55
CAPN1-213ENST00000527897 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.5■□□□□ 0.55
CAPN1-213ENST00000527897 HELLSQ9NRZ9 838 aa18.5■□□□□ 0.55
CAPN1-213ENST00000527897 HOXC10Q9NYD6 342 aa18.5■□□□□ 0.55
CAPN1-213ENST00000527897 MYH4Q9Y623 1939 aa18.49■□□□□ 0.55
CAPN1-213ENST00000527897 WDR46O15213 610 aaKnown RBP18.49■□□□□ 0.55
CAPN1-213ENST00000527897 CTDSPL2Q05D32 466 aa18.49■□□□□ 0.55
CAPN1-213ENST00000527897 MCMDC2Q4G0Z9 681 aa18.49■□□□□ 0.55
CAPN1-213ENST00000527897 SOCS4Q8WXH5 440 aa18.49■□□□□ 0.55
CAPN1-213ENST00000527897 CLIP2Q9UDT6 1046 aa18.49■□□□□ 0.55
CAPN1-213ENST00000527897 GREB1LQ9C091 1923 aaPredicted RBP18.49■□□□□ 0.55
CAPN1-213ENST00000527897 HMGCRP04035 888 aa18.48■□□□□ 0.55
CAPN1-213ENST00000527897 TSPY3P0CV98 308 aa18.48■□□□□ 0.55
CAPN1-213ENST00000527897 TSPY8P0CW00 308 aa18.48■□□□□ 0.55
CAPN1-213ENST00000527897 FAM47AQ5JRC9 791 aa18.48■□□□□ 0.55
CAPN1-213ENST00000527897 LBX2Q6XYB7 198 aa18.48■□□□□ 0.55
CAPN1-213ENST00000527897 ATG4CQ96DT6 458 aa18.48■□□□□ 0.55
CAPN1-213ENST00000527897 IVNS1ABPQ9Y6Y0 642 aa18.48■□□□□ 0.55
CAPN1-213ENST00000527897 FOXP2O15409 715 aa18.47■□□□□ 0.55
CAPN1-213ENST00000527897 GJB1P08034 283 aa18.47■□□□□ 0.55
CAPN1-213ENST00000527897 DSG3P32926 999 aa18.47■□□□□ 0.55
CAPN1-213ENST00000527897 TRIM32Q13049 653 aa18.47■□□□□ 0.55
CAPN1-213ENST00000527897 FAM83BQ5T0W9 1011 aa18.47■□□□□ 0.55
CAPN1-213ENST00000527897 NKX2-3Q8TAU0 364 aa18.47■□□□□ 0.55
CAPN1-213ENST00000527897 TRIB2Q92519 343 aa18.47■□□□□ 0.55
CAPN1-213ENST00000527897 CEP95Q96GE4 821 aa18.47■□□□□ 0.55
CAPN1-213ENST00000527897 NUP88Q99567 741 aaPredicted RBP18.47■□□□□ 0.55
CAPN1-213ENST00000527897 FBXO28Q9NVF7 368 aa18.47■□□□□ 0.55
CAPN1-213ENST00000527897 ISY1Q9ULR0 285 aaKnown RBP18.47■□□□□ 0.55
CAPN1-213ENST00000527897 RLFQ13129 1914 aa18.47■□□□□ 0.55
CAPN1-213ENST00000527897 TFRCP02786 760 aaKnown RBP18.46■□□□□ 0.55
CAPN1-213ENST00000527897 ZKSCAN1P17029 563 aaPredicted RBP18.46■□□□□ 0.55
CAPN1-213ENST00000527897 SDSP20132 328 aa18.46■□□□□ 0.55
CAPN1-213ENST00000527897 RGS2P41220 211 aa18.46■□□□□ 0.55
CAPN1-213ENST00000527897 GJA8P48165 433 aa18.46■□□□□ 0.55
CAPN1-213ENST00000527897 TFAP4Q01664 338 aa18.46■□□□□ 0.55
CAPN1-213ENST00000527897 ZNF589Q86UQ0 364 aaPredicted RBP18.46■□□□□ 0.55
CAPN1-213ENST00000527897 LRRC47Q8N1G4 583 aaKnown RBP18.46■□□□□ 0.55
CAPN1-213ENST00000527897 U2AF1L4Q8WU68 220 aaKnown RBP18.46■□□□□ 0.55
CAPN1-213ENST00000527897 CHMP4CQ96CF2 233 aa18.46■□□□□ 0.55
CAPN1-213ENST00000527897 SHISA4Q96DD7 197 aa18.46■□□□□ 0.55
CAPN1-213ENST00000527897 DEFB118Q96PH6 123 aa18.46■□□□□ 0.55
CAPN1-213ENST00000527897 MOV10L1Q9BXT6 1211 aaKnown RBP18.46■□□□□ 0.55
CAPN1-213ENST00000527897 SPATC1LQ9H0A9 340 aa18.46■□□□□ 0.55
CAPN1-213ENST00000527897 OSBPL3Q9H4L5 887 aa18.46■□□□□ 0.55
CAPN1-213ENST00000527897 INCENPQ9NQS7 918 aa18.46■□□□□ 0.55
CAPN1-213ENST00000527897 TOMM22Q9NS69 142 aa18.46■□□□□ 0.55
CAPN1-213ENST00000527897 NYAP2Q9P242 653 aa18.46■□□□□ 0.55
CAPN1-213ENST00000527897 COL11A1P12107 1806 aaPredicted RBP18.45■□□□□ 0.54
CAPN1-213ENST00000527897 PARP14Q460N5 1801 aa18.45■□□□□ 0.54
CAPN1-213ENST00000527897 TSPY2A6NKD2 308 aa18.45■□□□□ 0.54
CAPN1-213ENST00000527897 F5H6K3 240 aa18.45■□□□□ 0.54
CAPN1-213ENST00000527897 KLRC3Q07444 240 aa18.45■□□□□ 0.54
CAPN1-213ENST00000527897 CCL14Q16627 93 aa18.45■□□□□ 0.54
CAPN1-213ENST00000527897 MORN1Q5T089 497 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms