RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 LPAR1Q92633 364 aa29.26■■■□□ 2.27
SNF8-213ENST00000514929 CWC22Q9HCG8 908 aaKnown RBP29.26■■■□□ 2.27
SNF8-213ENST00000514929 GJD2Q9UKL4 321 aa29.26■■■□□ 2.27
SNF8-213ENST00000514929 EEF2P13639 858 aaKnown RBP29.25■■■□□ 2.27
SNF8-213ENST00000514929 CHD1LQ86WJ1 897 aa29.25■■■□□ 2.27
SNF8-213ENST00000514929 PORCNQ9H237 461 aa29.25■■■□□ 2.27
SNF8-213ENST00000514929 VCPKMTQ9H867 229 aa29.25■■■□□ 2.27
SNF8-213ENST00000514929 ZNF287Q9HBT7 754 aa29.25■■■□□ 2.27
SNF8-213ENST00000514929 SPDYE16A6NNV3 312 aaPredicted RBP29.24■■■□□ 2.27
SNF8-213ENST00000514929 RASA1P20936 1047 aa29.24■■■□□ 2.27
SNF8-213ENST00000514929 CCNA1P78396 465 aa29.24■■■□□ 2.27
SNF8-213ENST00000514929 COG2Q14746 738 aa29.24■■■□□ 2.27
SNF8-213ENST00000514929 LBX2Q6XYB7 198 aa29.24■■■□□ 2.27
SNF8-213ENST00000514929 SPICE1Q8N0Z3 855 aa29.24■■■□□ 2.27
SNF8-213ENST00000514929 NAPBQ9H115 298 aa29.24■■■□□ 2.27
SNF8-213ENST00000514929 CNMDO75829 334 aa29.23■■■□□ 2.27
SNF8-213ENST00000514929 NUCB1Q02818 461 aa29.23■■■□□ 2.27
SNF8-213ENST00000514929 KIAA1755Q5JYT7 1200 aa29.23■■■□□ 2.27
SNF8-213ENST00000514929 NKX2-3Q8TAU0 364 aa29.23■■■□□ 2.27
SNF8-213ENST00000514929 SOCS4Q8WXH5 440 aa29.23■■■□□ 2.27
SNF8-213ENST00000514929 NUDT12Q9BQG2 462 aa29.23■■■□□ 2.27
SNF8-213ENST00000514929 UNC93B1Q9H1C4 597 aa29.23■■■□□ 2.27
SNF8-213ENST00000514929 HOXC10Q9NYD6 342 aa29.23■■■□□ 2.27
SNF8-213ENST00000514929 TRIM6-TRIM34B2RNG4 842 aa29.22■■■□□ 2.27
SNF8-213ENST00000514929 GJB1P08034 283 aa29.22■■■□□ 2.27
SNF8-213ENST00000514929 CCDC129Q6ZRS4 1044 aa29.22■■■□□ 2.27
SNF8-213ENST00000514929 GPR142Q7Z601 462 aa29.22■■■□□ 2.27
SNF8-213ENST00000514929 PLEKHH3Q7Z736 793 aa29.22■■■□□ 2.27
SNF8-213ENST00000514929 ZNF444Q8N0Y2 327 aaPredicted RBP29.22■■■□□ 2.27
SNF8-213ENST00000514929 CYP2B6P20813 491 aa29.21■■■□□ 2.27
SNF8-213ENST00000514929 WDR78Q5VTH9 848 aa29.21■■■□□ 2.27
SNF8-213ENST00000514929 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.21■■■□□ 2.27
SNF8-213ENST00000514929 BTBD7Q9P203 1132 aa29.21■■■□□ 2.27
SNF8-213ENST00000514929 PDE4DIPQ5VU43 2346 aa29.2■■■□□ 2.27
SNF8-213ENST00000514929 WDR46O15213 610 aaKnown RBP29.2■■■□□ 2.26
SNF8-213ENST00000514929 RAD21O60216 631 aa29.2■■■□□ 2.26
SNF8-213ENST00000514929 HMGCRP04035 888 aa29.2■■■□□ 2.26
SNF8-213ENST00000514929 SLC3A2P08195 630 aaKnown RBP29.2■■■□□ 2.26
SNF8-213ENST00000514929 GJA8P48165 433 aa29.2■■■□□ 2.26
SNF8-213ENST00000514929 GOPCQ9HD26 462 aa29.2■■■□□ 2.26
SNF8-213ENST00000514929 HELLSQ9NRZ9 838 aa29.2■■■□□ 2.26
SNF8-213ENST00000514929 PLXNB2O15031 1838 aa29.2■■■□□ 2.26
SNF8-213ENST00000514929 PRDM1O75626 825 aa29.19■■■□□ 2.26
SNF8-213ENST00000514929 FLOT1O75955 427 aa29.19■■■□□ 2.26
SNF8-213ENST00000514929 RILPL2Q969X0 211 aa29.19■■■□□ 2.26
SNF8-213ENST00000514929 IRX6P78412 446 aaPredicted RBP29.18■■■□□ 2.26
SNF8-213ENST00000514929 PDE4BQ07343 736 aa29.18■■■□□ 2.26
SNF8-213ENST00000514929 PPARAQ07869 468 aa29.18■■■□□ 2.26
SNF8-213ENST00000514929 SAMD1Q6SPF0 538 aaPredicted RBP29.18■■■□□ 2.26
SNF8-213ENST00000514929 TICAM2Q86XR7 235 aa29.18■■■□□ 2.26
SNF8-213ENST00000514929 SHISA4Q96DD7 197 aa29.18■■■□□ 2.26
SNF8-213ENST00000514929 GREB1LQ9C091 1923 aaPredicted RBP29.18■■■□□ 2.26
SNF8-213ENST00000514929 RGS2P41220 211 aa29.17■■■□□ 2.26
SNF8-213ENST00000514929 PLEKHM2Q8IWE5 1019 aa29.17■■■□□ 2.26
SNF8-213ENST00000514929 U2AF1L4Q8WU68 220 aaKnown RBP29.17■■■□□ 2.26
SNF8-213ENST00000514929 MKI67P46013 3256 aaKnown RBP29.17■■■□□ 2.26
SNF8-213ENST00000514929 XRCC5P13010 732 aaKnown RBP29.16■■■□□ 2.26
SNF8-213ENST00000514929 DSG3P32926 999 aa29.16■■■□□ 2.26
SNF8-213ENST00000514929 MORN1Q5T089 497 aa29.16■■■□□ 2.26
SNF8-213ENST00000514929 PRPF38BQ5VTL8 546 aaKnown RBP29.16■■■□□ 2.26
SNF8-213ENST00000514929 TRIB2Q92519 343 aa29.16■■■□□ 2.26
SNF8-213ENST00000514929 FAM227BQ96M60 508 aa29.16■■■□□ 2.26
SNF8-213ENST00000514929 NYAP2Q9P242 653 aa29.16■■■□□ 2.26
SNF8-213ENST00000514929 IVNS1ABPQ9Y6Y0 642 aa29.16■■■□□ 2.26
SNF8-213ENST00000514929 MCMDC2Q4G0Z9 681 aa29.15■■■□□ 2.26
SNF8-213ENST00000514929 MB21D1Q8N884 522 aa29.15■■■□□ 2.26
SNF8-213ENST00000514929 USP6NLQ92738 828 aa29.15■■■□□ 2.26
SNF8-213ENST00000514929 DEFB118Q96PH6 123 aa29.15■■■□□ 2.26
SNF8-213ENST00000514929 OSBPL3Q9H4L5 887 aa29.15■■■□□ 2.26
SNF8-213ENST00000514929 A0A0D9SFI3 127 aa29.14■■■□□ 2.26
SNF8-213ENST00000514929 FOXP2O15409 715 aa29.14■■■□□ 2.26
SNF8-213ENST00000514929 SGPL1O95470 568 aa29.14■■■□□ 2.26
SNF8-213ENST00000514929 ZKSCAN1P17029 563 aaPredicted RBP29.14■■■□□ 2.26
SNF8-213ENST00000514929 VPS53Q5VIR6 699 aa29.14■■■□□ 2.26
SNF8-213ENST00000514929 TRMT44Q8IYL2 757 aaKnown RBP29.14■■■□□ 2.26
SNF8-213ENST00000514929 ATG4CQ96DT6 458 aa29.14■■■□□ 2.26
SNF8-213ENST00000514929 XRN2Q9H0D6 950 aaKnown RBP eCLIP29.14■■■□□ 2.26
SNF8-213ENST00000514929 RLFQ13129 1914 aa29.14■■■□□ 2.25
SNF8-213ENST00000514929 TSPY3P0CV98 308 aa29.13■■■□□ 2.25
SNF8-213ENST00000514929 TSPY8P0CW00 308 aa29.13■■■□□ 2.25
SNF8-213ENST00000514929 PTPREP23469 700 aa29.13■■■□□ 2.25
SNF8-213ENST00000514929 TRIM32Q13049 653 aa29.13■■■□□ 2.25
SNF8-213ENST00000514929 MAP2K5Q13163 448 aa29.13■■■□□ 2.25
SNF8-213ENST00000514929 NMIQ13287 307 aaPredicted RBP29.13■■■□□ 2.25
SNF8-213ENST00000514929 PLS1Q14651 629 aa29.13■■■□□ 2.25
SNF8-213ENST00000514929 APBA2Q99767 749 aa29.13■■■□□ 2.25
SNF8-213ENST00000514929 MOV10L1Q9BXT6 1211 aaKnown RBP29.13■■■□□ 2.25
SNF8-213ENST00000514929 SPATC1LQ9H0A9 340 aa29.13■■■□□ 2.25
SNF8-213ENST00000514929 PAK6Q9NQU5 681 aaPredicted RBP29.13■■■□□ 2.25
SNF8-213ENST00000514929 CLIP2Q9UDT6 1046 aa29.13■■■□□ 2.25
SNF8-213ENST00000514929 A0A0G2JMZ2 1700 aa29.13■■■□□ 2.25
SNF8-213ENST00000514929 IGKV6D-41A0A0C4DH26 115 aa29.12■■■□□ 2.25
SNF8-213ENST00000514929 SLC15A5A6NIM6 579 aa29.12■■■□□ 2.25
SNF8-213ENST00000514929 FAM83BQ5T0W9 1011 aa29.12■■■□□ 2.25
SNF8-213ENST00000514929 CEP95Q96GE4 821 aa29.12■■■□□ 2.25
SNF8-213ENST00000514929 HMX1Q9NP08 348 aaPredicted RBP29.12■■■□□ 2.25
SNF8-213ENST00000514929 RPTORQ8N122 1335 aa29.12■■■□□ 2.25
SNF8-213ENST00000514929 F5H6K3 240 aa29.11■■■□□ 2.25
SNF8-213ENST00000514929 TFRCP02786 760 aaKnown RBP29.11■■■□□ 2.25
SNF8-213ENST00000514929 TFAP4Q01664 338 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms