RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 PI4KBQ9UBF8 816 aa6.41□□□□□ -1.38
PROM1-211ENST00000511153 ARPP21Q9UBL0 812 aaPredicted RBP6.41□□□□□ -1.38
PROM1-211ENST00000511153 SERPINB13Q9UIV8 391 aa6.41□□□□□ -1.38
PROM1-211ENST00000511153 ISY1Q9ULR0 285 aaKnown RBP6.41□□□□□ -1.38
PROM1-211ENST00000511153 RAD50Q92878 1312 aa6.41□□□□□ -1.38
PROM1-211ENST00000511153 RPAP1Q9BWH6 1393 aaPredicted RBP6.41□□□□□ -1.38
PROM1-211ENST00000511153 ATAD5Q96QE3 1844 aa6.41□□□□□ -1.38
PROM1-211ENST00000511153 PHF20L1A8MW92 1017 aa6.4□□□□□ -1.38
PROM1-211ENST00000511153 PPP1R12BO60237 982 aaPredicted RBP6.4□□□□□ -1.38
PROM1-211ENST00000511153 AOC2O75106 756 aa6.4□□□□□ -1.38
PROM1-211ENST00000511153 TFAP4Q01664 338 aa6.4□□□□□ -1.38
PROM1-211ENST00000511153 VGLL4Q14135 290 aa6.4□□□□□ -1.38
PROM1-211ENST00000511153 SEPT2Q15019 361 aa6.4□□□□□ -1.38
PROM1-211ENST00000511153 IMMTQ16891 758 aaKnown RBP6.4□□□□□ -1.38
PROM1-211ENST00000511153 CERKLQ49MI3 558 aaPredicted RBP6.4□□□□□ -1.38
PROM1-211ENST00000511153 FKBP1CQ5VVH2 108 aa6.4□□□□□ -1.38
PROM1-211ENST00000511153 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.4□□□□□ -1.38
PROM1-211ENST00000511153 RASGRP2Q7LDG7 609 aa6.4□□□□□ -1.38
PROM1-211ENST00000511153 ARMC9Q7Z3E5 817 aa6.4□□□□□ -1.38
PROM1-211ENST00000511153 IL27Q8NEV9 243 aa6.4□□□□□ -1.38
PROM1-211ENST00000511153 MAP4K1Q92918 833 aa6.4□□□□□ -1.38
PROM1-211ENST00000511153 ZIC5Q96T25 663 aa6.4□□□□□ -1.38
PROM1-211ENST00000511153 SENP2Q9HC62 589 aa6.4□□□□□ -1.38
PROM1-211ENST00000511153 RBM27Q9P2N5 1060 aaKnown RBP6.4□□□□□ -1.38
PROM1-211ENST00000511153 NAP1L2Q9ULW6 460 aaPredicted RBP6.4□□□□□ -1.38
PROM1-211ENST00000511153 VPS9D1Q9Y2B5 631 aa6.4□□□□□ -1.38
PROM1-211ENST00000511153 PASKQ96RG2 1323 aa6.4□□□□□ -1.38
PROM1-211ENST00000511153 ATRNL1Q5VV63 1379 aa6.4□□□□□ -1.38
PROM1-211ENST00000511153 LAMA4Q16363 1823 aa6.4□□□□□ -1.38
PROM1-211ENST00000511153 TRIM75PA6NK02 468 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 TSPY2A6NKD2 308 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 TMEM88BA6NKF7 163 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 E7EWF7 191 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 KDM4AO75164 1064 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 REC8O95072 547 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 TSPY3P0CV98 308 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 TSPY8P0CW00 308 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 RASA1P20936 1047 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 GJA5P36382 358 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 IREB2P48200 963 aaKnown RBP6.4□□□□□ -1.39
PROM1-211ENST00000511153 MMP14P50281 582 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 ZNF157P51786 506 aaPredicted RBP6.4□□□□□ -1.39
PROM1-211ENST00000511153 ABCB5Q2M3G0 1257 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 AKNAD1Q5T1N1 836 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 DCAF15Q66K64 600 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 MFSD6Q6ZSS7 791 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 C16orf86Q6ZW13 317 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 CYB5R4Q7L1T6 521 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 ZNF444Q8N0Y2 327 aaPredicted RBP6.4□□□□□ -1.39
PROM1-211ENST00000511153 LRRC47Q8N1G4 583 aaKnown RBP6.4□□□□□ -1.39
PROM1-211ENST00000511153 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.4□□□□□ -1.39
PROM1-211ENST00000511153 ACER1Q8TDN7 264 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 OPTNQ96CV9 577 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 KLRG1Q96E93 195 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 SLC10A4Q96EP9 437 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 JAKMIP1Q96N16 626 aaKnown RBP6.4□□□□□ -1.39
PROM1-211ENST00000511153 USP26Q9BXU7 913 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 UPF3BQ9BZI7 483 aaKnown RBP6.4□□□□□ -1.39
PROM1-211ENST00000511153 FAM117AQ9C073 453 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 DHX36Q9H2U1 1008 aaKnown RBP6.4□□□□□ -1.39
PROM1-211ENST00000511153 SNX14Q9Y5W7 946 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 CSADQ9Y600 493 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 SNCAIPQ9Y6H5 919 aa6.4□□□□□ -1.39
PROM1-211ENST00000511153 RCCD1A6NED2 376 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 PPFIA3O75145 1194 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 OATP04181 439 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 SLC3A2P08195 630 aaKnown RBP6.39□□□□□ -1.39
PROM1-211ENST00000511153 GUCY1A2P33402 732 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 CAP2P40123 477 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 ECE1P42892 770 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 APLP1P51693 650 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 GABPAQ06546 454 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 FSTL1Q12841 308 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 NECTIN1Q15223 517 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 ALX1Q15699 326 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 SBK1Q52WX2 424 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 PACS2Q86VP3 889 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 CERS3Q8IU89 383 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 FOXP4Q8IVH2 680 aaPredicted RBP6.39□□□□□ -1.39
PROM1-211ENST00000511153 SPICE1Q8N0Z3 855 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.39□□□□□ -1.39
PROM1-211ENST00000511153 TMUB1Q9BVT8 246 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 BACH2Q9BYV9 841 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 PICK1Q9NRD5 415 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 ZSWIM5Q9P217 1185 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 CLIP2Q9UDT6 1046 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 CTNNA3Q9UI47 895 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 ZBTB21Q9ULJ3 1066 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 PPP2R3BQ9Y5P8 575 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 ZHX2Q9Y6X8 837 aa6.39□□□□□ -1.39
PROM1-211ENST00000511153 PAPPA2Q9BXP8 1791 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 PCNTO95613 3336 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 DOCK1Q14185 1865 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 A0A1W2PRG0 241 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 PEX10O60683 326 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 RXRAP19793 462 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 CASTP20810 708 aaKnown RBP6.38□□□□□ -1.39
PROM1-211ENST00000511153 HSPA4P34932 840 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 PDE4BQ07343 736 aa6.38□□□□□ -1.39
PROM1-211ENST00000511153 SPP2Q13103 211 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms