RNA–Protein interactions for RNA: ENST00000510331.1

LSM6-206, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-206ENST00000510331 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.18■■□□□ 1.14
LSM6-206ENST00000510331 TANGO6Q9C0B7 1094 aa22.18■■□□□ 1.14
LSM6-206ENST00000510331 PORCNQ9H237 461 aa22.18■■□□□ 1.14
LSM6-206ENST00000510331 COL11A1P12107 1806 aaPredicted RBP22.17■■□□□ 1.14
LSM6-206ENST00000510331 A0A0D9SFI3 127 aa22.17■■□□□ 1.14
LSM6-206ENST00000510331 PATL2C9JE40 543 aaKnown RBP22.17■■□□□ 1.14
LSM6-206ENST00000510331 PRDM1O75626 825 aa22.17■■□□□ 1.14
LSM6-206ENST00000510331 EEF2P13639 858 aaKnown RBP22.17■■□□□ 1.14
LSM6-206ENST00000510331 ATP2B2Q01814 1243 aa22.17■■□□□ 1.14
LSM6-206ENST00000510331 Q3C1V9 767 aa22.17■■□□□ 1.14
LSM6-206ENST00000510331 PLEKHM2Q8IWE5 1019 aa22.17■■□□□ 1.14
LSM6-206ENST00000510331 FAM227BQ96M60 508 aa22.17■■□□□ 1.14
LSM6-206ENST00000510331 NACAP1Q9BZK3 213 aa22.17■■□□□ 1.14
LSM6-206ENST00000510331 SH2D4AQ9H788 454 aa22.17■■□□□ 1.14
LSM6-206ENST00000510331 BIN2Q9UBW5 565 aaPredicted RBP22.17■■□□□ 1.14
LSM6-206ENST00000510331 TMX2Q9Y320 296 aa22.17■■□□□ 1.14
LSM6-206ENST00000510331 INHAP05111 366 aa22.16■■□□□ 1.14
LSM6-206ENST00000510331 VPS53Q5VIR6 699 aa22.16■■□□□ 1.14
LSM6-206ENST00000510331 NAPBQ9H115 298 aa22.16■■□□□ 1.14
LSM6-206ENST00000510331 VCPKMTQ9H867 229 aa22.16■■□□□ 1.14
LSM6-206ENST00000510331 TRIM6-TRIM34B2RNG4 842 aa22.15■■□□□ 1.14
LSM6-206ENST00000510331 CCL5P13501 91 aa22.15■■□□□ 1.14
LSM6-206ENST00000510331 LBX2Q6XYB7 198 aa22.15■■□□□ 1.14
LSM6-206ENST00000510331 PXYLP1Q8TE99 480 aa22.15■■□□□ 1.14
LSM6-206ENST00000510331 LPAR1Q92633 364 aa22.15■■□□□ 1.14
LSM6-206ENST00000510331 SHISA4Q96DD7 197 aa22.15■■□□□ 1.14
LSM6-206ENST00000510331 KANSL2Q9H9L4 492 aa22.15■■□□□ 1.14
LSM6-206ENST00000510331 MKNK2Q9HBH9 465 aa22.15■■□□□ 1.14
LSM6-206ENST00000510331 BTBD7Q9P203 1132 aa22.15■■□□□ 1.14
LSM6-206ENST00000510331 RABGAP1Q9Y3P9 1069 aa22.15■■□□□ 1.14
LSM6-206ENST00000510331 UBXN2AP68543 259 aa22.14■■□□□ 1.13
LSM6-206ENST00000510331 PPARAQ07869 468 aa22.14■■□□□ 1.13
LSM6-206ENST00000510331 UNC93B1Q9H1C4 597 aa22.14■■□□□ 1.13
LSM6-206ENST00000510331 GJD2Q9UKL4 321 aa22.14■■□□□ 1.13
LSM6-206ENST00000510331 PLIN4Q96Q06 1357 aa22.13■■□□□ 1.13
LSM6-206ENST00000510331 LAMA4Q16363 1823 aa22.13■■□□□ 1.13
LSM6-206ENST00000510331 ZNF236Q9UL36 1845 aa22.13■■□□□ 1.13
LSM6-206ENST00000510331 MAPK4P31152 587 aa22.13■■□□□ 1.13
LSM6-206ENST00000510331 NMIQ13287 307 aaPredicted RBP22.13■■□□□ 1.13
LSM6-206ENST00000510331 GPR142Q7Z601 462 aa22.13■■□□□ 1.13
LSM6-206ENST00000510331 ZNF589Q86UQ0 364 aaPredicted RBP22.13■■□□□ 1.13
LSM6-206ENST00000510331 RILPL2Q969X0 211 aa22.13■■□□□ 1.13
LSM6-206ENST00000510331 OSBPL3Q9H4L5 887 aa22.13■■□□□ 1.13
LSM6-206ENST00000510331 HELLSQ9NRZ9 838 aa22.13■■□□□ 1.13
LSM6-206ENST00000510331 WDR46O15213 610 aaKnown RBP22.12■■□□□ 1.13
LSM6-206ENST00000510331 SOCS4Q8WXH5 440 aa22.12■■□□□ 1.13
LSM6-206ENST00000510331 RNF208Q9H0X6 261 aa22.12■■□□□ 1.13
LSM6-206ENST00000510331 IGKV6D-41A0A0C4DH26 115 aa22.11■■□□□ 1.13
LSM6-206ENST00000510331 RAD21O60216 631 aa22.11■■□□□ 1.13
LSM6-206ENST00000510331 FLOT1O75955 427 aa22.11■■□□□ 1.13
LSM6-206ENST00000510331 CYP2B6P20813 491 aa22.11■■□□□ 1.13
LSM6-206ENST00000510331 PLEKHH3Q7Z736 793 aa22.11■■□□□ 1.13
LSM6-206ENST00000510331 CCAR1Q8IX12 1150 aaKnown RBP22.11■■□□□ 1.13
LSM6-206ENST00000510331 TRIB2Q92519 343 aa22.11■■□□□ 1.13
LSM6-206ENST00000510331 ATG4CQ96DT6 458 aa22.11■■□□□ 1.13
LSM6-206ENST00000510331 GOPCQ9HD26 462 aa22.11■■□□□ 1.13
LSM6-206ENST00000510331 HMGCRP04035 888 aa22.1■■□□□ 1.13
LSM6-206ENST00000510331 CCNA1P78396 465 aa22.1■■□□□ 1.13
LSM6-206ENST00000510331 CTDSPL2Q05D32 466 aa22.1■■□□□ 1.13
LSM6-206ENST00000510331 TRIM32Q13049 653 aa22.1■■□□□ 1.13
LSM6-206ENST00000510331 COG2Q14746 738 aa22.1■■□□□ 1.13
LSM6-206ENST00000510331 WDR78Q5VTH9 848 aa22.1■■□□□ 1.13
LSM6-206ENST00000510331 SAMD1Q6SPF0 538 aaPredicted RBP22.1■■□□□ 1.13
LSM6-206ENST00000510331 NUDT12Q9BQG2 462 aa22.1■■□□□ 1.13
LSM6-206ENST00000510331 ZNF287Q9HBT7 754 aa22.1■■□□□ 1.13
LSM6-206ENST00000510331 CWC22Q9HCG8 908 aaKnown RBP22.1■■□□□ 1.13
LSM6-206ENST00000510331 PDE4AP27815 886 aa22.09■■□□□ 1.13
LSM6-206ENST00000510331 MCMDC2Q4G0Z9 681 aa22.09■■□□□ 1.13
LSM6-206ENST00000510331 FAM47AQ5JRC9 791 aa22.09■■□□□ 1.13
LSM6-206ENST00000510331 MORN1Q5T089 497 aa22.09■■□□□ 1.13
LSM6-206ENST00000510331 FAM83BQ5T0W9 1011 aa22.09■■□□□ 1.13
LSM6-206ENST00000510331 CEP95Q96GE4 821 aa22.09■■□□□ 1.13
LSM6-206ENST00000510331 NUP88Q99567 741 aaPredicted RBP22.09■■□□□ 1.13
LSM6-206ENST00000510331 FBXO28Q9NVF7 368 aa22.09■■□□□ 1.13
LSM6-206ENST00000510331 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.09■■□□□ 1.13
LSM6-206ENST00000510331 TACC3Q9Y6A5 838 aa22.09■■□□□ 1.13
LSM6-206ENST00000510331 CCDC171Q6TFL3 1326 aa22.08■■□□□ 1.13
LSM6-206ENST00000510331 GJB1P08034 283 aa22.08■■□□□ 1.13
LSM6-206ENST00000510331 SLC3A2P08195 630 aaKnown RBP22.08■■□□□ 1.13
LSM6-206ENST00000510331 DSG3P32926 999 aa22.08■■□□□ 1.13
LSM6-206ENST00000510331 PDE4BQ07343 736 aa22.08■■□□□ 1.13
LSM6-206ENST00000510331 ZNF444Q8N0Y2 327 aaPredicted RBP22.08■■□□□ 1.13
LSM6-206ENST00000510331 LRRC47Q8N1G4 583 aaKnown RBP22.08■■□□□ 1.13
LSM6-206ENST00000510331 USP6NLQ92738 828 aa22.08■■□□□ 1.13
LSM6-206ENST00000510331 APBA2Q99767 749 aa22.08■■□□□ 1.13
LSM6-206ENST00000510331 NYAP2Q9P242 653 aa22.08■■□□□ 1.13
LSM6-206ENST00000510331 NDUFB10O96000 172 aa22.07■■□□□ 1.12
LSM6-206ENST00000510331 TSPY3P0CV98 308 aa22.07■■□□□ 1.12
LSM6-206ENST00000510331 TSPY8P0CW00 308 aa22.07■■□□□ 1.12
LSM6-206ENST00000510331 SDSP20132 328 aa22.07■■□□□ 1.12
LSM6-206ENST00000510331 GJA8P48165 433 aa22.07■■□□□ 1.12
LSM6-206ENST00000510331 U2AF1L4Q8WU68 220 aaKnown RBP22.07■■□□□ 1.12
LSM6-206ENST00000510331 MOV10L1Q9BXT6 1211 aaKnown RBP22.07■■□□□ 1.12
LSM6-206ENST00000510331 INCENPQ9NQS7 918 aa22.07■■□□□ 1.12
LSM6-206ENST00000510331 HOXC10Q9NYD6 342 aa22.07■■□□□ 1.12
LSM6-206ENST00000510331 FRMPD3Q5JV73 1810 aa22.07■■□□□ 1.12
LSM6-206ENST00000510331 ZKSCAN1P17029 563 aaPredicted RBP22.06■■□□□ 1.12
LSM6-206ENST00000510331 RGS2P41220 211 aa22.06■■□□□ 1.12
LSM6-206ENST00000510331 CCL14Q16627 93 aa22.06■■□□□ 1.12
LSM6-206ENST00000510331 TICAM2Q86XR7 235 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms