RNA–Protein interactions for RNA: ENST00000508918.5

LDB2-211, Transcript of LIM domain binding 2, humanhuman

TSL 5

Gene LDB2, Length 1,498 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-211ENST00000508918 SPATA32Q96LK8 384 aa15.73■□□□□ 0.11
LDB2-211ENST00000508918 ZNF396Q96N95 335 aaPredicted RBP15.73■□□□□ 0.11
LDB2-211ENST00000508918 CLIP2Q9UDT6 1046 aa15.73■□□□□ 0.11
LDB2-211ENST00000508918 GOLGB1Q14789 3259 aaKnown RBP15.73■□□□□ 0.11
LDB2-211ENST00000508918 ELP1O95163 1332 aa15.73■□□□□ 0.11
LDB2-211ENST00000508918 PALM3A6NDB9 673 aaPredicted RBP15.72■□□□□ 0.11
LDB2-211ENST00000508918 TTLL1O95922 423 aa15.72■□□□□ 0.11
LDB2-211ENST00000508918 MMP1P03956 469 aa15.72■□□□□ 0.11
LDB2-211ENST00000508918 GNL2Q13823 731 aaKnown RBP15.72■□□□□ 0.11
LDB2-211ENST00000508918 GSE1Q14687 1217 aa15.72■□□□□ 0.11
LDB2-211ENST00000508918 RBM26Q5T8P6 1007 aaKnown RBP15.72■□□□□ 0.11
LDB2-211ENST00000508918 ATL3Q6DD88 541 aa15.72■□□□□ 0.11
LDB2-211ENST00000508918 RASGRP2Q7LDG7 609 aa15.72■□□□□ 0.11
LDB2-211ENST00000508918 LEO1Q8WVC0 666 aaPredicted RBP15.72■□□□□ 0.11
LDB2-211ENST00000508918 DPF2Q92785 391 aa15.72■□□□□ 0.11
LDB2-211ENST00000508918 SYT17Q9BSW7 474 aa15.72■□□□□ 0.11
LDB2-211ENST00000508918 BAZ2BQ9UIF8 2168 aaKnown RBP15.72■□□□□ 0.11
LDB2-211ENST00000508918 CFAP45Q9UL16 551 aa15.72■□□□□ 0.11
LDB2-211ENST00000508918 KCNJ14Q9UNX9 436 aa15.72■□□□□ 0.11
LDB2-211ENST00000508918 EGFRP00533 1210 aa15.71■□□□□ 0.11
LDB2-211ENST00000508918 PARP1P09874 1014 aaKnown RBP15.71■□□□□ 0.11
LDB2-211ENST00000508918 XBP1P17861 261 aa15.71■□□□□ 0.11
LDB2-211ENST00000508918 LMNB1P20700 586 aa15.71■□□□□ 0.11
LDB2-211ENST00000508918 UBE2HP62256 183 aa15.71■□□□□ 0.11
LDB2-211ENST00000508918 SAFBQ15424 915 aaKnown RBP eCLIP15.71■□□□□ 0.11
LDB2-211ENST00000508918 PPP4R3BQ5MIZ7 849 aa15.71■□□□□ 0.11
LDB2-211ENST00000508918 CAVIN1Q6NZI2 390 aaKnown RBP15.71■□□□□ 0.11
LDB2-211ENST00000508918 FAM83AQ86UY5 434 aa15.71■□□□□ 0.11
LDB2-211ENST00000508918 LRRC47Q8N1G4 583 aaKnown RBP15.71■□□□□ 0.11
LDB2-211ENST00000508918 LZTS2Q9BRK4 669 aa15.71■□□□□ 0.11
LDB2-211ENST00000508918 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.71■□□□□ 0.11
LDB2-211ENST00000508918 RBM27Q9P2N5 1060 aaKnown RBP15.71■□□□□ 0.11
LDB2-211ENST00000508918 HERC5Q9UII4 1024 aaKnown RBP15.71■□□□□ 0.11
LDB2-211ENST00000508918 CNOT7Q9UIV1 285 aaKnown RBP15.71■□□□□ 0.11
LDB2-211ENST00000508918 USP17L5A8MUK1 530 aa15.71■□□□□ 0.1
LDB2-211ENST00000508918 GDF11O95390 407 aa15.71■□□□□ 0.1
LDB2-211ENST00000508918 GOLGA8HP0CJ92 632 aa15.71■□□□□ 0.1
LDB2-211ENST00000508918 U2AF2P26368 475 aaKnown RBP eCLIP15.71■□□□□ 0.1
LDB2-211ENST00000508918 CEBPZQ03701 1054 aaKnown RBP15.71■□□□□ 0.1
LDB2-211ENST00000508918 ABCB5Q2M3G0 1257 aa15.71■□□□□ 0.1
LDB2-211ENST00000508918 SHROOM1Q2M3G4 852 aaPredicted RBP15.71■□□□□ 0.1
LDB2-211ENST00000508918 TPRNQ4KMQ1 711 aa15.71■□□□□ 0.1
LDB2-211ENST00000508918 MYSM1Q5VVJ2 828 aa15.71■□□□□ 0.1
LDB2-211ENST00000508918 PIBF1Q8WXW3 757 aa15.71■□□□□ 0.1
LDB2-211ENST00000508918 SHISA4Q96DD7 197 aa15.71■□□□□ 0.1
LDB2-211ENST00000508918 USP28Q96RU2 1077 aa15.71■□□□□ 0.1
LDB2-211ENST00000508918 FTOQ9C0B1 505 aaKnown RBP eCLIP15.71■□□□□ 0.1
LDB2-211ENST00000508918 TMEM39BQ9GZU3 492 aa15.71■□□□□ 0.1
LDB2-211ENST00000508918 VPS54Q9P1Q0 977 aa15.71■□□□□ 0.1
LDB2-211ENST00000508918 KLRF2D3W0D1 207 aa15.7■□□□□ 0.1
LDB2-211ENST00000508918 SCG2P13521 617 aa15.7■□□□□ 0.1
LDB2-211ENST00000508918 ATP2B2Q01814 1243 aa15.7■□□□□ 0.1
LDB2-211ENST00000508918 PFKFB3Q16875 520 aaPredicted RBP15.7■□□□□ 0.1
LDB2-211ENST00000508918 SLC35G1Q2M3R5 365 aa15.7■□□□□ 0.1
LDB2-211ENST00000508918 TBC1D10BQ4KMP7 808 aaPredicted RBP15.7■□□□□ 0.1
LDB2-211ENST00000508918 USP17L2Q6R6M4 530 aa15.7■□□□□ 0.1
LDB2-211ENST00000508918 TMEM179Q6ZVK1 233 aa15.7■□□□□ 0.1
LDB2-211ENST00000508918 SAMD7Q7Z3H4 446 aa15.7■□□□□ 0.1
LDB2-211ENST00000508918 DIS3L2Q8IYB7 885 aaKnown RBP15.7■□□□□ 0.1
LDB2-211ENST00000508918 PHF20Q9BVI0 1012 aa15.7■□□□□ 0.1
LDB2-211ENST00000508918 KANSL2Q9H9L4 492 aa15.7■□□□□ 0.1
LDB2-211ENST00000508918 BTBD18B2RXH4 712 aa15.69■□□□□ 0.1
LDB2-211ENST00000508918 PDHBP11177 359 aa15.69■□□□□ 0.1
LDB2-211ENST00000508918 TNNI2P48788 182 aa15.69■□□□□ 0.1
LDB2-211ENST00000508918 SEPT2Q15019 361 aa15.69■□□□□ 0.1
LDB2-211ENST00000508918 CDAN1Q8IWY9 1227 aa15.69■□□□□ 0.1
LDB2-211ENST00000508918 RTEL1Q9NZ71 1219 aa15.69■□□□□ 0.1
LDB2-211ENST00000508918 NYAP2Q9P242 653 aa15.69■□□□□ 0.1
LDB2-211ENST00000508918 RCOR1Q9UKL0 485 aa15.69■□□□□ 0.1
LDB2-211ENST00000508918 CYTH3O43739 400 aa15.68■□□□□ 0.1
LDB2-211ENST00000508918 SNHG28P0DPA3 235 aa15.68■□□□□ 0.1
LDB2-211ENST00000508918 EEF2P13639 858 aaKnown RBP15.68■□□□□ 0.1
LDB2-211ENST00000508918 JAG1P78504 1218 aa15.68■□□□□ 0.1
LDB2-211ENST00000508918 RRP1BQ14684 758 aaKnown RBP15.68■□□□□ 0.1
LDB2-211ENST00000508918 KIF4BQ2VIQ3 1234 aa15.68■□□□□ 0.1
LDB2-211ENST00000508918 ASPRV1Q53RT3 343 aa15.68■□□□□ 0.1
LDB2-211ENST00000508918 NOSTRINQ8IVI9 506 aa15.68■□□□□ 0.1
LDB2-211ENST00000508918 SPZ1Q9BXG8 430 aa15.68■□□□□ 0.1
LDB2-211ENST00000508918 FOXP1Q9H334 677 aaPredicted RBP15.68■□□□□ 0.1
LDB2-211ENST00000508918 CPVLQ9H3G5 476 aa15.68■□□□□ 0.1
LDB2-211ENST00000508918 CABP5Q9NP86 173 aa15.68■□□□□ 0.1
LDB2-211ENST00000508918 PGAP2Q9UHJ9 254 aa15.68■□□□□ 0.1
LDB2-211ENST00000508918 FRMPD2Q68DX3 1309 aaPredicted RBP15.68■□□□□ 0.1
LDB2-211ENST00000508918 GOLGA6L4A6NEF3 574 aa15.67■□□□□ 0.1
LDB2-211ENST00000508918 H7C1D1 291 aa15.67■□□□□ 0.1
LDB2-211ENST00000508918 GH2P01242 217 aa15.67■□□□□ 0.1
LDB2-211ENST00000508918 YBX3P16989 372 aaKnown RBP eCLIP15.67■□□□□ 0.1
LDB2-211ENST00000508918 SMARCA1P28370 1054 aa15.67■□□□□ 0.1
LDB2-211ENST00000508918 ICA1Q05084 483 aa15.67■□□□□ 0.1
LDB2-211ENST00000508918 TNFAIP1Q13829 316 aa15.67■□□□□ 0.1
LDB2-211ENST00000508918 RASA3Q14644 834 aa15.67■□□□□ 0.1
LDB2-211ENST00000508918 GPC2Q8N158 579 aa15.67■□□□□ 0.1
LDB2-211ENST00000508918 OXER1Q8TDS5 423 aa15.67■□□□□ 0.1
LDB2-211ENST00000508918 MKL1Q969V6 931 aa15.67■□□□□ 0.1
LDB2-211ENST00000508918 TMEM63CQ9P1W3 806 aa15.67■□□□□ 0.1
LDB2-211ENST00000508918 CLIC4Q9Y696 253 aa15.67■□□□□ 0.1
LDB2-211ENST00000508918 TBC1D12O60347 775 aa15.66■□□□□ 0.1
LDB2-211ENST00000508918 VEGFAP15692 232 aaPredicted RBP15.66■□□□□ 0.1
LDB2-211ENST00000508918 KRT2P35908 639 aa15.66■□□□□ 0.1
LDB2-211ENST00000508918 NASPP49321 788 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms