RNA–Protein interactions for RNA: ENST00000504168.5

TSPAN17-205, Transcript of tetraspanin 17, humanhuman

TSL 5

Gene TSPAN17, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-205ENST00000504168 SPDYE16A6NNV3 312 aaPredicted RBP28.55■■■□□ 2.16
TSPAN17-205ENST00000504168 RASA1P20936 1047 aa28.55■■■□□ 2.16
TSPAN17-205ENST00000504168 UBXN2AP68543 259 aa28.55■■■□□ 2.16
TSPAN17-205ENST00000504168 NUCB1Q02818 461 aa28.55■■■□□ 2.16
TSPAN17-205ENST00000504168 CHD1LQ86WJ1 897 aa28.55■■■□□ 2.16
TSPAN17-205ENST00000504168 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.55■■■□□ 2.16
TSPAN17-205ENST00000504168 PORCNQ9H237 461 aa28.55■■■□□ 2.16
TSPAN17-205ENST00000504168 SH2D4AQ9H788 454 aa28.55■■■□□ 2.16
TSPAN17-205ENST00000504168 CCL5P13501 91 aa28.54■■■□□ 2.16
TSPAN17-205ENST00000504168 CCDC129Q6ZRS4 1044 aa28.54■■■□□ 2.16
TSPAN17-205ENST00000504168 VCPKMTQ9H867 229 aa28.54■■■□□ 2.16
TSPAN17-205ENST00000504168 KANSL2Q9H9L4 492 aa28.54■■■□□ 2.16
TSPAN17-205ENST00000504168 FOXP2O15409 715 aa28.53■■■□□ 2.16
TSPAN17-205ENST00000504168 INHAP05111 366 aa28.53■■■□□ 2.16
TSPAN17-205ENST00000504168 EEF2P13639 858 aaKnown RBP28.53■■■□□ 2.16
TSPAN17-205ENST00000504168 MAPK4P31152 587 aa28.53■■■□□ 2.16
TSPAN17-205ENST00000504168 LPAR1Q92633 364 aa28.53■■■□□ 2.16
TSPAN17-205ENST00000504168 NACAP1Q9BZK3 213 aa28.53■■■□□ 2.16
TSPAN17-205ENST00000504168 MKNK2Q9HBH9 465 aa28.53■■■□□ 2.16
TSPAN17-205ENST00000504168 SHISA4Q96DD7 197 aa28.52■■■□□ 2.16
TSPAN17-205ENST00000504168 TANGO6Q9C0B7 1094 aa28.52■■■□□ 2.16
TSPAN17-205ENST00000504168 BTBD7Q9P203 1132 aa28.52■■■□□ 2.16
TSPAN17-205ENST00000504168 COL11A1P12107 1806 aaPredicted RBP28.52■■■□□ 2.16
TSPAN17-205ENST00000504168 ATP2B2Q01814 1243 aa28.51■■■□□ 2.15
TSPAN17-205ENST00000504168 GPR142Q7Z601 462 aa28.51■■■□□ 2.15
TSPAN17-205ENST00000504168 PLEKHM2Q8IWE5 1019 aa28.51■■■□□ 2.15
TSPAN17-205ENST00000504168 SPICE1Q8N0Z3 855 aa28.51■■■□□ 2.15
TSPAN17-205ENST00000504168 RNF208Q9H0X6 261 aa28.51■■■□□ 2.15
TSPAN17-205ENST00000504168 NAPBQ9H115 298 aa28.51■■■□□ 2.15
TSPAN17-205ENST00000504168 UNC93B1Q9H1C4 597 aa28.51■■■□□ 2.15
TSPAN17-205ENST00000504168 GJB1P08034 283 aa28.5■■■□□ 2.15
TSPAN17-205ENST00000504168 COG2Q14746 738 aa28.5■■■□□ 2.15
TSPAN17-205ENST00000504168 PRDM1O75626 825 aa28.49■■■□□ 2.15
TSPAN17-205ENST00000504168 IRX6P78412 446 aaPredicted RBP28.49■■■□□ 2.15
TSPAN17-205ENST00000504168 SOCS4Q8WXH5 440 aa28.49■■■□□ 2.15
TSPAN17-205ENST00000504168 NUDT12Q9BQG2 462 aa28.49■■■□□ 2.15
TSPAN17-205ENST00000504168 OSBPL3Q9H4L5 887 aa28.49■■■□□ 2.15
TSPAN17-205ENST00000504168 HELLSQ9NRZ9 838 aa28.49■■■□□ 2.15
TSPAN17-205ENST00000504168 WDR46O15213 610 aaKnown RBP28.48■■■□□ 2.15
TSPAN17-205ENST00000504168 CCNA1P78396 465 aa28.48■■■□□ 2.15
TSPAN17-205ENST00000504168 PLEKHH3Q7Z736 793 aa28.48■■■□□ 2.15
TSPAN17-205ENST00000504168 TICAM2Q86XR7 235 aa28.48■■■□□ 2.15
TSPAN17-205ENST00000504168 CCAR1Q8IX12 1150 aaKnown RBP28.48■■■□□ 2.15
TSPAN17-205ENST00000504168 USP6NLQ92738 828 aa28.48■■■□□ 2.15
TSPAN17-205ENST00000504168 FAM227BQ96M60 508 aa28.48■■■□□ 2.15
TSPAN17-205ENST00000504168 HOXC10Q9NYD6 342 aa28.48■■■□□ 2.15
TSPAN17-205ENST00000504168 IGKV6D-41A0A0C4DH26 115 aa28.47■■■□□ 2.15
TSPAN17-205ENST00000504168 A0A0D9SFI3 127 aa28.47■■■□□ 2.15
TSPAN17-205ENST00000504168 HMGCRP04035 888 aa28.47■■■□□ 2.15
TSPAN17-205ENST00000504168 CYP2B6P20813 491 aa28.47■■■□□ 2.15
TSPAN17-205ENST00000504168 DSG3P32926 999 aa28.47■■■□□ 2.15
TSPAN17-205ENST00000504168 GJA8P48165 433 aa28.47■■■□□ 2.15
TSPAN17-205ENST00000504168 PPARAQ07869 468 aa28.47■■■□□ 2.15
TSPAN17-205ENST00000504168 MORN1Q5T089 497 aa28.47■■■□□ 2.15
TSPAN17-205ENST00000504168 VPS53Q5VIR6 699 aa28.47■■■□□ 2.15
TSPAN17-205ENST00000504168 ZNF287Q9HBT7 754 aa28.47■■■□□ 2.15
TSPAN17-205ENST00000504168 TRIM6-TRIM34B2RNG4 842 aa28.46■■■□□ 2.15
TSPAN17-205ENST00000504168 NKX2-3Q8TAU0 364 aa28.46■■■□□ 2.15
TSPAN17-205ENST00000504168 TRIB2Q92519 343 aa28.46■■■□□ 2.15
TSPAN17-205ENST00000504168 GOPCQ9HD26 462 aa28.46■■■□□ 2.15
TSPAN17-205ENST00000504168 NYAP2Q9P242 653 aa28.46■■■□□ 2.15
TSPAN17-205ENST00000504168 FLOT1O75955 427 aa28.45■■■□□ 2.14
TSPAN17-205ENST00000504168 ZNF444Q8N0Y2 327 aaPredicted RBP28.45■■■□□ 2.14
TSPAN17-205ENST00000504168 RILPL2Q969X0 211 aa28.45■■■□□ 2.14
TSPAN17-205ENST00000504168 PLIN4Q96Q06 1357 aa28.45■■■□□ 2.14
TSPAN17-205ENST00000504168 ZNF236Q9UL36 1845 aa28.44■■■□□ 2.14
TSPAN17-205ENST00000504168 XRCC5P13010 732 aaKnown RBP28.44■■■□□ 2.14
TSPAN17-205ENST00000504168 PDE4BQ07343 736 aa28.44■■■□□ 2.14
TSPAN17-205ENST00000504168 TRIM32Q13049 653 aa28.44■■■□□ 2.14
TSPAN17-205ENST00000504168 NMIQ13287 307 aaPredicted RBP28.44■■■□□ 2.14
TSPAN17-205ENST00000504168 MCMDC2Q4G0Z9 681 aa28.44■■■□□ 2.14
TSPAN17-205ENST00000504168 U2AF1L4Q8WU68 220 aaKnown RBP28.44■■■□□ 2.14
TSPAN17-205ENST00000504168 ATG4CQ96DT6 458 aa28.44■■■□□ 2.14
TSPAN17-205ENST00000504168 CWC22Q9HCG8 908 aaKnown RBP28.44■■■□□ 2.14
TSPAN17-205ENST00000504168 PAK6Q9NQU5 681 aaPredicted RBP28.44■■■□□ 2.14
TSPAN17-205ENST00000504168 SLC3A2P08195 630 aaKnown RBP28.43■■■□□ 2.14
TSPAN17-205ENST00000504168 RGS2P41220 211 aa28.43■■■□□ 2.14
TSPAN17-205ENST00000504168 WDR78Q5VTH9 848 aa28.42■■■□□ 2.14
TSPAN17-205ENST00000504168 PRPF38BQ5VTL8 546 aaKnown RBP28.42■■■□□ 2.14
TSPAN17-205ENST00000504168 ZNF589Q86UQ0 364 aaPredicted RBP28.42■■■□□ 2.14
TSPAN17-205ENST00000504168 MB21D1Q8N884 522 aa28.42■■■□□ 2.14
TSPAN17-205ENST00000504168 CEP95Q96GE4 821 aa28.42■■■□□ 2.14
TSPAN17-205ENST00000504168 MOV10L1Q9BXT6 1211 aaKnown RBP28.42■■■□□ 2.14
TSPAN17-205ENST00000504168 SPATC1LQ9H0A9 340 aa28.42■■■□□ 2.14
TSPAN17-205ENST00000504168 FBXO28Q9NVF7 368 aa28.42■■■□□ 2.14
TSPAN17-205ENST00000504168 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.42■■■□□ 2.14
TSPAN17-205ENST00000504168 ZNFX1Q9P2E3 1918 aaKnown RBP28.41■■■□□ 2.14
TSPAN17-205ENST00000504168 RAD21O60216 631 aa28.41■■■□□ 2.14
TSPAN17-205ENST00000504168 SGPL1O95470 568 aa28.41■■■□□ 2.14
TSPAN17-205ENST00000504168 PTPREP23469 700 aa28.41■■■□□ 2.14
TSPAN17-205ENST00000504168 CTDSPL2Q05D32 466 aa28.41■■■□□ 2.14
TSPAN17-205ENST00000504168 MAP2K5Q13163 448 aa28.41■■■□□ 2.14
TSPAN17-205ENST00000504168 ALX1Q15699 326 aa28.41■■■□□ 2.14
TSPAN17-205ENST00000504168 FAM83BQ5T0W9 1011 aa28.41■■■□□ 2.14
TSPAN17-205ENST00000504168 NEDD1Q8NHV4 660 aa28.41■■■□□ 2.14
TSPAN17-205ENST00000504168 DEFB118Q96PH6 123 aa28.41■■■□□ 2.14
TSPAN17-205ENST00000504168 APBA2Q99767 749 aa28.41■■■□□ 2.14
TSPAN17-205ENST00000504168 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.41■■■□□ 2.14
TSPAN17-205ENST00000504168 MTMR4Q9NYA4 1195 aa28.41■■■□□ 2.14
TSPAN17-205ENST00000504168 SLC15A5A6NIM6 579 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms