RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 SHISA4Q96DD7 197 aa19.28■□□□□ 0.68
NR1H3-227ENST00000498548 TANGO6Q9C0B7 1094 aa19.28■□□□□ 0.68
NR1H3-227ENST00000498548 MKNK2Q9HBH9 465 aa19.28■□□□□ 0.68
NR1H3-227ENST00000498548 TMX2Q9Y320 296 aa19.28■□□□□ 0.68
NR1H3-227ENST00000498548 RABGAP1Q9Y3P9 1069 aa19.28■□□□□ 0.68
NR1H3-227ENST00000498548 SPDYE16A6NNV3 312 aaPredicted RBP19.27■□□□□ 0.68
NR1H3-227ENST00000498548 GNAT2P19087 354 aa19.27■□□□□ 0.68
NR1H3-227ENST00000498548 IRX6P78412 446 aaPredicted RBP19.27■□□□□ 0.68
NR1H3-227ENST00000498548 AAMPQ13685 434 aa19.27■□□□□ 0.68
NR1H3-227ENST00000498548 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.27■□□□□ 0.68
NR1H3-227ENST00000498548 PRDM1O75626 825 aa19.26■□□□□ 0.67
NR1H3-227ENST00000498548 GJB1P08034 283 aa19.26■□□□□ 0.67
NR1H3-227ENST00000498548 RASA1P20936 1047 aa19.26■□□□□ 0.67
NR1H3-227ENST00000498548 MAPK4P31152 587 aa19.26■□□□□ 0.67
NR1H3-227ENST00000498548 COG2Q14746 738 aa19.26■□□□□ 0.67
NR1H3-227ENST00000498548 WDR78Q5VTH9 848 aa19.26■□□□□ 0.67
NR1H3-227ENST00000498548 GPR142Q7Z601 462 aa19.26■□□□□ 0.67
NR1H3-227ENST00000498548 PLEKHH3Q7Z736 793 aa19.26■□□□□ 0.67
NR1H3-227ENST00000498548 SMC5Q8IY18 1101 aa19.26■□□□□ 0.67
NR1H3-227ENST00000498548 EVI5LQ96CN4 794 aa19.26■□□□□ 0.67
NR1H3-227ENST00000498548 NUDT12Q9BQG2 462 aa19.26■□□□□ 0.67
NR1H3-227ENST00000498548 VCPKMTQ9H867 229 aa19.26■□□□□ 0.67
NR1H3-227ENST00000498548 CWC22Q9HCG8 908 aaKnown RBP19.26■□□□□ 0.67
NR1H3-227ENST00000498548 PDE4DIPQ5VU43 2346 aa19.26■□□□□ 0.67
NR1H3-227ENST00000498548 RLFQ13129 1914 aa19.25■□□□□ 0.67
NR1H3-227ENST00000498548 RAD21O60216 631 aa19.25■□□□□ 0.67
NR1H3-227ENST00000498548 GJA8P48165 433 aa19.25■□□□□ 0.67
NR1H3-227ENST00000498548 KANSL2Q9H9L4 492 aa19.25■□□□□ 0.67
NR1H3-227ENST00000498548 LBX2Q6XYB7 198 aa19.24■□□□□ 0.67
NR1H3-227ENST00000498548 U2AF1L4Q8WU68 220 aaKnown RBP19.24■□□□□ 0.67
NR1H3-227ENST00000498548 TRIB2Q92519 343 aa19.24■□□□□ 0.67
NR1H3-227ENST00000498548 DEFB118Q96PH6 123 aa19.24■□□□□ 0.67
NR1H3-227ENST00000498548 HOXC10Q9NYD6 342 aa19.24■□□□□ 0.67
NR1H3-227ENST00000498548 MKI67P46013 3256 aaKnown RBP19.23■□□□□ 0.67
NR1H3-227ENST00000498548 TRIM6-TRIM34B2RNG4 842 aa19.23■□□□□ 0.67
NR1H3-227ENST00000498548 FLOT1O75955 427 aa19.23■□□□□ 0.67
NR1H3-227ENST00000498548 SGPL1O95470 568 aa19.23■□□□□ 0.67
NR1H3-227ENST00000498548 DSG3P32926 999 aa19.23■□□□□ 0.67
NR1H3-227ENST00000498548 CCL14Q16627 93 aa19.23■□□□□ 0.67
NR1H3-227ENST00000498548 MORN1Q5T089 497 aa19.23■□□□□ 0.67
NR1H3-227ENST00000498548 VPS53Q5VIR6 699 aa19.23■□□□□ 0.67
NR1H3-227ENST00000498548 PRPF38BQ5VTL8 546 aaKnown RBP19.23■□□□□ 0.67
NR1H3-227ENST00000498548 CHD1LQ86WJ1 897 aa19.23■□□□□ 0.67
NR1H3-227ENST00000498548 ZNF444Q8N0Y2 327 aaPredicted RBP19.23■□□□□ 0.67
NR1H3-227ENST00000498548 NKX2-3Q8TAU0 364 aa19.23■□□□□ 0.67
NR1H3-227ENST00000498548 USP6NLQ92738 828 aa19.23■□□□□ 0.67
NR1H3-227ENST00000498548 RILPL2Q969X0 211 aa19.23■□□□□ 0.67
NR1H3-227ENST00000498548 ATG4CQ96DT6 458 aa19.23■□□□□ 0.67
NR1H3-227ENST00000498548 NACAP1Q9BZK3 213 aa19.23■□□□□ 0.67
NR1H3-227ENST00000498548 NAPBQ9H115 298 aa19.23■□□□□ 0.67
NR1H3-227ENST00000498548 SH2D4AQ9H788 454 aa19.23■□□□□ 0.67
NR1H3-227ENST00000498548 GREB1LQ9C091 1923 aaPredicted RBP19.23■□□□□ 0.67
NR1H3-227ENST00000498548 ROBO3Q96MS0 1386 aa19.22■□□□□ 0.67
NR1H3-227ENST00000498548 FOXP2O15409 715 aa19.22■□□□□ 0.67
NR1H3-227ENST00000498548 TFRCP02786 760 aaKnown RBP19.22■□□□□ 0.67
NR1H3-227ENST00000498548 HMGCRP04035 888 aa19.22■□□□□ 0.67
NR1H3-227ENST00000498548 CCNA1P78396 465 aa19.22■□□□□ 0.67
NR1H3-227ENST00000498548 SOCS4Q8WXH5 440 aa19.22■□□□□ 0.67
NR1H3-227ENST00000498548 LPAR1Q92633 364 aa19.22■□□□□ 0.67
NR1H3-227ENST00000498548 FAM227BQ96M60 508 aa19.22■□□□□ 0.67
NR1H3-227ENST00000498548 INCENPQ9NQS7 918 aa19.22■□□□□ 0.67
NR1H3-227ENST00000498548 FBXO28Q9NVF7 368 aa19.22■□□□□ 0.67
NR1H3-227ENST00000498548 PARP14Q460N5 1801 aa19.21■□□□□ 0.67
NR1H3-227ENST00000498548 WDR46O15213 610 aaKnown RBP19.21■□□□□ 0.67
NR1H3-227ENST00000498548 PTPREP23469 700 aa19.21■□□□□ 0.67
NR1H3-227ENST00000498548 NUCB1Q02818 461 aa19.21■□□□□ 0.67
NR1H3-227ENST00000498548 CTDSPL2Q05D32 466 aa19.21■□□□□ 0.67
NR1H3-227ENST00000498548 PPARAQ07869 468 aa19.21■□□□□ 0.67
NR1H3-227ENST00000498548 PLS1Q14651 629 aa19.21■□□□□ 0.67
NR1H3-227ENST00000498548 FAM47AQ5JRC9 791 aa19.21■□□□□ 0.67
NR1H3-227ENST00000498548 PLEKHM2Q8IWE5 1019 aa19.21■□□□□ 0.67
NR1H3-227ENST00000498548 MOV10L1Q9BXT6 1211 aaKnown RBP19.21■□□□□ 0.67
NR1H3-227ENST00000498548 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.21■□□□□ 0.67
NR1H3-227ENST00000498548 CLIP2Q9UDT6 1046 aa19.21■□□□□ 0.67
NR1H3-227ENST00000498548 MYH4Q9Y623 1939 aa19.21■□□□□ 0.67
NR1H3-227ENST00000498548 A0A0D9SFI3 127 aa19.2■□□□□ 0.66
NR1H3-227ENST00000498548 RGS2P41220 211 aa19.2■□□□□ 0.66
NR1H3-227ENST00000498548 MAP2K5Q13163 448 aa19.2■□□□□ 0.66
NR1H3-227ENST00000498548 FAM83BQ5T0W9 1011 aa19.2■□□□□ 0.66
NR1H3-227ENST00000498548 NUP88Q99567 741 aaPredicted RBP19.2■□□□□ 0.66
NR1H3-227ENST00000498548 GOPCQ9HD26 462 aa19.2■□□□□ 0.66
NR1H3-227ENST00000498548 HMX1Q9NP08 348 aaPredicted RBP19.2■□□□□ 0.66
NR1H3-227ENST00000498548 PAK6Q9NQU5 681 aaPredicted RBP19.2■□□□□ 0.66
NR1H3-227ENST00000498548 HELLSQ9NRZ9 838 aa19.2■□□□□ 0.66
NR1H3-227ENST00000498548 COL11A1P12107 1806 aaPredicted RBP19.2■□□□□ 0.66
NR1H3-227ENST00000498548 IGKV6D-41A0A0C4DH26 115 aa19.19■□□□□ 0.66
NR1H3-227ENST00000498548 XRCC5P13010 732 aaKnown RBP19.19■□□□□ 0.66
NR1H3-227ENST00000498548 ZKSCAN1P17029 563 aaPredicted RBP19.19■□□□□ 0.66
NR1H3-227ENST00000498548 NMIQ13287 307 aaPredicted RBP19.19■□□□□ 0.66
NR1H3-227ENST00000498548 NPLOC4Q8TAT6 608 aa19.19■□□□□ 0.66
NR1H3-227ENST00000498548 SPATC1LQ9H0A9 340 aa19.19■□□□□ 0.66
NR1H3-227ENST00000498548 NYAP2Q9P242 653 aa19.19■□□□□ 0.66
NR1H3-227ENST00000498548 TACC3Q9Y6A5 838 aa19.19■□□□□ 0.66
NR1H3-227ENST00000498548 RPTORQ8N122 1335 aa19.19■□□□□ 0.66
NR1H3-227ENST00000498548 SLC15A5A6NIM6 579 aa19.18■□□□□ 0.66
NR1H3-227ENST00000498548 PRKAR2AP13861 404 aaKnown RBP19.18■□□□□ 0.66
NR1H3-227ENST00000498548 ERCC3P19447 782 aa19.18■□□□□ 0.66
NR1H3-227ENST00000498548 TFAP4Q01664 338 aa19.18■□□□□ 0.66
NR1H3-227ENST00000498548 CACNB2Q08289 660 aaPredicted RBP19.18■□□□□ 0.66
NR1H3-227ENST00000498548 MCMDC2Q4G0Z9 681 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms