RNA–Protein interactions for RNA: ENST00000494511.5

PMP22-206, Transcript of peripheral myelin protein 22, humanhuman

TSL 1 (best) BASIC

Gene PMP22, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-206ENST00000494511 RNF208Q9H0X6 261 aa17.25■□□□□ 0.35
PMP22-206ENST00000494511 PORCNQ9H237 461 aa17.25■□□□□ 0.35
PMP22-206ENST00000494511 PLXNB2O15031 1838 aa17.24■□□□□ 0.35
PMP22-206ENST00000494511 PRDM1O75626 825 aa17.24■□□□□ 0.35
PMP22-206ENST00000494511 CNMDO75829 334 aa17.24■□□□□ 0.35
PMP22-206ENST00000494511 INHAP05111 366 aa17.24■□□□□ 0.35
PMP22-206ENST00000494511 EEF2P13639 858 aaKnown RBP17.24■□□□□ 0.35
PMP22-206ENST00000494511 RASA1P20936 1047 aa17.24■□□□□ 0.35
PMP22-206ENST00000494511 SAMD1Q6SPF0 538 aaPredicted RBP17.24■□□□□ 0.35
PMP22-206ENST00000494511 CHD1LQ86WJ1 897 aa17.24■□□□□ 0.35
PMP22-206ENST00000494511 NACAP1Q9BZK3 213 aa17.24■□□□□ 0.35
PMP22-206ENST00000494511 UNC93B1Q9H1C4 597 aa17.24■□□□□ 0.35
PMP22-206ENST00000494511 CWC22Q9HCG8 908 aaKnown RBP17.24■□□□□ 0.35
PMP22-206ENST00000494511 GJD2Q9UKL4 321 aa17.24■□□□□ 0.35
PMP22-206ENST00000494511 TMX2Q9Y320 296 aa17.24■□□□□ 0.35
PMP22-206ENST00000494511 RABGAP1Q9Y3P9 1069 aa17.24■□□□□ 0.35
PMP22-206ENST00000494511 CEP290O15078 2479 aa17.24■□□□□ 0.35
PMP22-206ENST00000494511 SPDYE16A6NNV3 312 aaPredicted RBP17.23■□□□□ 0.35
PMP22-206ENST00000494511 TRIM6-TRIM34B2RNG4 842 aa17.23■□□□□ 0.35
PMP22-206ENST00000494511 RAD21O60216 631 aa17.23■□□□□ 0.35
PMP22-206ENST00000494511 CYP2B6P20813 491 aa17.23■□□□□ 0.35
PMP22-206ENST00000494511 NUCB1Q02818 461 aa17.23■□□□□ 0.35
PMP22-206ENST00000494511 WDR78Q5VTH9 848 aa17.23■□□□□ 0.35
PMP22-206ENST00000494511 PXYLP1Q8TE99 480 aa17.23■□□□□ 0.35
PMP22-206ENST00000494511 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.23■□□□□ 0.35
PMP22-206ENST00000494511 NAPBQ9H115 298 aa17.23■□□□□ 0.35
PMP22-206ENST00000494511 SH2D4AQ9H788 454 aa17.23■□□□□ 0.35
PMP22-206ENST00000494511 VCPKMTQ9H867 229 aa17.23■□□□□ 0.35
PMP22-206ENST00000494511 KANSL2Q9H9L4 492 aa17.23■□□□□ 0.35
PMP22-206ENST00000494511 BTBD7Q9P203 1132 aa17.23■□□□□ 0.35
PMP22-206ENST00000494511 MAPK4P31152 587 aa17.22■□□□□ 0.35
PMP22-206ENST00000494511 FXR1P51114 621 aaKnown RBP eCLIP17.22■□□□□ 0.35
PMP22-206ENST00000494511 RILPL2Q969X0 211 aa17.22■□□□□ 0.35
PMP22-206ENST00000494511 ROBO3Q96MS0 1386 aa17.22■□□□□ 0.35
PMP22-206ENST00000494511 TRIM32Q13049 653 aa17.21■□□□□ 0.35
PMP22-206ENST00000494511 COG2Q14746 738 aa17.21■□□□□ 0.35
PMP22-206ENST00000494511 GPR142Q7Z601 462 aa17.21■□□□□ 0.35
PMP22-206ENST00000494511 PLEKHH3Q7Z736 793 aa17.21■□□□□ 0.35
PMP22-206ENST00000494511 PLEKHM2Q8IWE5 1019 aa17.21■□□□□ 0.35
PMP22-206ENST00000494511 LPAR1Q92633 364 aa17.21■□□□□ 0.35
PMP22-206ENST00000494511 SHISA4Q96DD7 197 aa17.21■□□□□ 0.35
PMP22-206ENST00000494511 FAM227BQ96M60 508 aa17.21■□□□□ 0.35
PMP22-206ENST00000494511 NUDT12Q9BQG2 462 aa17.21■□□□□ 0.35
PMP22-206ENST00000494511 RLFQ13129 1914 aa17.21■□□□□ 0.35
PMP22-206ENST00000494511 GREB1LQ9C091 1923 aaPredicted RBP17.21■□□□□ 0.35
PMP22-206ENST00000494511 A0A0D9SFI3 127 aa17.2■□□□□ 0.34
PMP22-206ENST00000494511 FOXP2O15409 715 aa17.2■□□□□ 0.34
PMP22-206ENST00000494511 FLOT1O75955 427 aa17.2■□□□□ 0.34
PMP22-206ENST00000494511 GJB1P08034 283 aa17.2■□□□□ 0.34
PMP22-206ENST00000494511 CCNA1P78396 465 aa17.2■□□□□ 0.34
PMP22-206ENST00000494511 VPS53Q5VIR6 699 aa17.2■□□□□ 0.34
PMP22-206ENST00000494511 LBX2Q6XYB7 198 aa17.2■□□□□ 0.34
PMP22-206ENST00000494511 ZNF444Q8N0Y2 327 aaPredicted RBP17.2■□□□□ 0.34
PMP22-206ENST00000494511 HOXC10Q9NYD6 342 aa17.2■□□□□ 0.34
PMP22-206ENST00000494511 HMGCRP04035 888 aa17.19■□□□□ 0.34
PMP22-206ENST00000494511 CTDSPL2Q05D32 466 aa17.19■□□□□ 0.34
PMP22-206ENST00000494511 PPARAQ07869 468 aa17.19■□□□□ 0.34
PMP22-206ENST00000494511 NMIQ13287 307 aaPredicted RBP17.19■□□□□ 0.34
PMP22-206ENST00000494511 SOCS4Q8WXH5 440 aa17.19■□□□□ 0.34
PMP22-206ENST00000494511 TRIB2Q92519 343 aa17.19■□□□□ 0.34
PMP22-206ENST00000494511 ATG4CQ96DT6 458 aa17.19■□□□□ 0.34
PMP22-206ENST00000494511 ZNF287Q9HBT7 754 aa17.19■□□□□ 0.34
PMP22-206ENST00000494511 GOPCQ9HD26 462 aa17.19■□□□□ 0.34
PMP22-206ENST00000494511 HELLSQ9NRZ9 838 aa17.19■□□□□ 0.34
PMP22-206ENST00000494511 MYH4Q9Y623 1939 aa17.19■□□□□ 0.34
PMP22-206ENST00000494511 WDR46O15213 610 aaKnown RBP17.18■□□□□ 0.34
PMP22-206ENST00000494511 SLC3A2P08195 630 aaKnown RBP17.18■□□□□ 0.34
PMP22-206ENST00000494511 DSG3P32926 999 aa17.18■□□□□ 0.34
PMP22-206ENST00000494511 GJA8P48165 433 aa17.18■□□□□ 0.34
PMP22-206ENST00000494511 PDE4BQ07343 736 aa17.18■□□□□ 0.34
PMP22-206ENST00000494511 PLS1Q14651 629 aa17.18■□□□□ 0.34
PMP22-206ENST00000494511 FAM47AQ5JRC9 791 aa17.18■□□□□ 0.34
PMP22-206ENST00000494511 MORN1Q5T089 497 aa17.18■□□□□ 0.34
PMP22-206ENST00000494511 FAM83BQ5T0W9 1011 aa17.18■□□□□ 0.34
PMP22-206ENST00000494511 NKX2-3Q8TAU0 364 aa17.18■□□□□ 0.34
PMP22-206ENST00000494511 U2AF1L4Q8WU68 220 aaKnown RBP17.18■□□□□ 0.34
PMP22-206ENST00000494511 DEFB118Q96PH6 123 aa17.18■□□□□ 0.34
PMP22-206ENST00000494511 INCENPQ9NQS7 918 aa17.18■□□□□ 0.34
PMP22-206ENST00000494511 FBXO28Q9NVF7 368 aa17.18■□□□□ 0.34
PMP22-206ENST00000494511 CLIP2Q9UDT6 1046 aa17.18■□□□□ 0.34
PMP22-206ENST00000494511 PARP14Q460N5 1801 aa17.17■□□□□ 0.34
PMP22-206ENST00000494511 RGS2P41220 211 aa17.17■□□□□ 0.34
PMP22-206ENST00000494511 CCL14Q16627 93 aa17.17■□□□□ 0.34
PMP22-206ENST00000494511 MCMDC2Q4G0Z9 681 aa17.17■□□□□ 0.34
PMP22-206ENST00000494511 USP6NLQ92738 828 aa17.17■□□□□ 0.34
PMP22-206ENST00000494511 NUP88Q99567 741 aaPredicted RBP17.17■□□□□ 0.34
PMP22-206ENST00000494511 MOV10L1Q9BXT6 1211 aaKnown RBP17.17■□□□□ 0.34
PMP22-206ENST00000494511 NYAP2Q9P242 653 aa17.17■□□□□ 0.34
PMP22-206ENST00000494511 COLQQ9Y215 455 aaPredicted RBP17.17■□□□□ 0.34
PMP22-206ENST00000494511 IGKV6D-41A0A0C4DH26 115 aa17.16■□□□□ 0.34
PMP22-206ENST00000494511 SGPL1O95470 568 aa17.16■□□□□ 0.34
PMP22-206ENST00000494511 TFRCP02786 760 aaKnown RBP17.16■□□□□ 0.34
PMP22-206ENST00000494511 TSPY3P0CV98 308 aa17.16■□□□□ 0.34
PMP22-206ENST00000494511 TSPY8P0CW00 308 aa17.16■□□□□ 0.34
PMP22-206ENST00000494511 ZKSCAN1P17029 563 aaPredicted RBP17.16■□□□□ 0.34
PMP22-206ENST00000494511 TFAP4Q01664 338 aa17.16■□□□□ 0.34
PMP22-206ENST00000494511 MAP2K5Q13163 448 aa17.16■□□□□ 0.34
PMP22-206ENST00000494511 ZNF589Q86UQ0 364 aaPredicted RBP17.16■□□□□ 0.34
PMP22-206ENST00000494511 CEP95Q96GE4 821 aa17.16■□□□□ 0.34
PMP22-206ENST00000494511 SPATC1LQ9H0A9 340 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 236.3 ms