RNA–Protein interactions for RNA: ENST00000494414.1

GPATCH4-207, Transcript of G-patch domain containing 4, humanhuman

TSL 5

Gene GPATCH4, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-207ENST00000494414 BACE1P56817 501 aa10.01□□□□□ -0.81
GPATCH4-207ENST00000494414 TTC22Q5TAA0 569 aa10.01□□□□□ -0.81
GPATCH4-207ENST00000494414 C17orf99Q6UX52 265 aa10.01□□□□□ -0.81
GPATCH4-207ENST00000494414 SIAH1Q8IUQ4 282 aa10.01□□□□□ -0.81
GPATCH4-207ENST00000494414 SLC44A5Q8NCS7 719 aa10.01□□□□□ -0.81
GPATCH4-207ENST00000494414 CHMP5Q9NZZ3 219 aa10.01□□□□□ -0.81
GPATCH4-207ENST00000494414 ANAPC4Q9UJX5 808 aa10.01□□□□□ -0.81
GPATCH4-207ENST00000494414 ISY1Q9ULR0 285 aaKnown RBP10.01□□□□□ -0.81
GPATCH4-207ENST00000494414 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.01□□□□□ -0.81
GPATCH4-207ENST00000494414 SLC4A4Q9Y6R1 1079 aa10.01□□□□□ -0.81
GPATCH4-207ENST00000494414 ZHX2Q9Y6X8 837 aa10.01□□□□□ -0.81
GPATCH4-207ENST00000494414 BRCA2P51587 3418 aa10.01□□□□□ -0.81
GPATCH4-207ENST00000494414 FRMPD3Q5JV73 1810 aa10□□□□□ -0.81
GPATCH4-207ENST00000494414 CYP2D7A0A087X1C5 515 aa10□□□□□ -0.81
GPATCH4-207ENST00000494414 PATL2C9JE40 543 aaKnown RBP10□□□□□ -0.81
GPATCH4-207ENST00000494414 USP17L12C9JPN9 530 aa10□□□□□ -0.81
GPATCH4-207ENST00000494414 USP17L21D6R901 530 aa10□□□□□ -0.81
GPATCH4-207ENST00000494414 GDF11O95390 407 aa10□□□□□ -0.81
GPATCH4-207ENST00000494414 SLC34A2O95436 690 aa10□□□□□ -0.81
GPATCH4-207ENST00000494414 GH2P01242 217 aa10□□□□□ -0.81
GPATCH4-207ENST00000494414 HOXA7P31268 230 aaPredicted RBP10□□□□□ -0.81
GPATCH4-207ENST00000494414 OTUD7BQ6GQQ9 843 aa10□□□□□ -0.81
GPATCH4-207ENST00000494414 POTEEQ6S8J3 1075 aa10□□□□□ -0.81
GPATCH4-207ENST00000494414 FASTKD5Q7L8L6 764 aaKnown RBP10□□□□□ -0.81
GPATCH4-207ENST00000494414 ZNF589Q86UQ0 364 aaPredicted RBP10□□□□□ -0.81
GPATCH4-207ENST00000494414 HSCBQ8IWL3 235 aa10□□□□□ -0.81
GPATCH4-207ENST00000494414 IFNL3Q8IZI9 196 aa10□□□□□ -0.81
GPATCH4-207ENST00000494414 CRACR2BQ8N4Y2 399 aaPredicted RBP10□□□□□ -0.81
GPATCH4-207ENST00000494414 FAM227BQ96M60 508 aa10□□□□□ -0.81
GPATCH4-207ENST00000494414 C22orf23Q9BZE7 217 aa10□□□□□ -0.81
GPATCH4-207ENST00000494414 KIAA1683Q9H0B3 1180 aa10□□□□□ -0.81
GPATCH4-207ENST00000494414 AS3MTQ9HBK9 375 aa10□□□□□ -0.81
GPATCH4-207ENST00000494414 A0A1W2PRG0 241 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 C19orf81C9J6K1 198 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 PDHXO00330 501 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 FKTNO75072 461 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 AKR1B1P15121 316 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 SDSP20132 328 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 RASA1P20936 1047 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 CDK8P49336 464 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 SPP2Q13103 211 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 NMIQ13287 307 aaPredicted RBP9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 CAMK2BQ13554 666 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 TAF1CQ15572 869 aaPredicted RBP9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 CERKLQ49MI3 558 aaPredicted RBP9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 TREML2Q5T2D2 321 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 VPS53Q5VIR6 699 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 LBX2Q6XYB7 198 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 TMEM179Q6ZVK1 233 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 CTU1Q7Z7A3 348 aaKnown RBP9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 DYNLL2Q96FJ2 89 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 CCDC17Q96LX7 622 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 PARK7Q99497 189 aaKnown RBP9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 NBPF3Q9H094 633 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 IL25Q9H293 177 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 EMILIN3Q9NT22 766 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 TACC3Q9Y6A5 838 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 CCDC171Q6TFL3 1326 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 RAD50Q92878 1312 aa9.99□□□□□ -0.81
GPATCH4-207ENST00000494414 TRIM75PA6NK02 468 aa9.98□□□□□ -0.81
GPATCH4-207ENST00000494414 POLR3DP05423 398 aaPredicted RBP9.98□□□□□ -0.81
GPATCH4-207ENST00000494414 CTGFP29279 349 aa9.98□□□□□ -0.81
GPATCH4-207ENST00000494414 DGKZQ13574 1117 aa9.98□□□□□ -0.81
GPATCH4-207ENST00000494414 MTMR2Q13614 643 aa9.98□□□□□ -0.81
GPATCH4-207ENST00000494414 ABCB5Q2M3G0 1257 aa9.98□□□□□ -0.81
GPATCH4-207ENST00000494414 SLC4A8Q2Y0W8 1093 aa9.98□□□□□ -0.81
GPATCH4-207ENST00000494414 MCMDC2Q4G0Z9 681 aa9.98□□□□□ -0.81
GPATCH4-207ENST00000494414 CCDC129Q6ZRS4 1044 aa9.98□□□□□ -0.81
GPATCH4-207ENST00000494414 ZFYVE28Q9HCC9 887 aa9.98□□□□□ -0.81
GPATCH4-207ENST00000494414 MORF4L1Q9UBU8 362 aa9.98□□□□□ -0.81
GPATCH4-207ENST00000494414 SYNPO2Q9UMS6 1093 aa9.98□□□□□ -0.81
GPATCH4-207ENST00000494414 PCDHGA4Q9Y5G9 962 aa9.98□□□□□ -0.81
GPATCH4-207ENST00000494414 TNRC18O15417 2968 aaPredicted RBP9.98□□□□□ -0.81
GPATCH4-207ENST00000494414 LCTP09848 1927 aa9.97□□□□□ -0.81
GPATCH4-207ENST00000494414 LRRC37A2A6NM11 1700 aa9.97□□□□□ -0.81
GPATCH4-207ENST00000494414 DDX11L8A8MPP1 907 aa9.97□□□□□ -0.81
GPATCH4-207ENST00000494414 USP17L10C9JJH3 530 aa9.97□□□□□ -0.81
GPATCH4-207ENST00000494414 DPYSL4O14531 572 aa9.97□□□□□ -0.81
GPATCH4-207ENST00000494414 ORC4O43929 436 aa9.97□□□□□ -0.81
GPATCH4-207ENST00000494414 HMGCS2P54868 508 aa9.97□□□□□ -0.81
GPATCH4-207ENST00000494414 LACTBP83111 547 aaPredicted RBP9.97□□□□□ -0.81
GPATCH4-207ENST00000494414 SEPT2Q15019 361 aa9.97□□□□□ -0.81
GPATCH4-207ENST00000494414 ARSIQ5FYB1 569 aa9.97□□□□□ -0.81
GPATCH4-207ENST00000494414 OTOP1Q7RTM1 612 aa9.97□□□□□ -0.81
GPATCH4-207ENST00000494414 KCNV2Q8TDN2 545 aa9.97□□□□□ -0.81
GPATCH4-207ENST00000494414 ACER1Q8TDN7 264 aa9.97□□□□□ -0.81
GPATCH4-207ENST00000494414 PTCD2Q8WV60 388 aaKnown RBP9.97□□□□□ -0.81
GPATCH4-207ENST00000494414 ERO1AQ96HE7 468 aa9.97□□□□□ -0.81
GPATCH4-207ENST00000494414 MCOLN1Q9GZU1 580 aa9.97□□□□□ -0.81
GPATCH4-207ENST00000494414 ZSWIM6Q9HCJ5 1215 aa9.97□□□□□ -0.81
GPATCH4-207ENST00000494414 TMX2Q9Y320 296 aa9.97□□□□□ -0.81
GPATCH4-207ENST00000494414 PLXNA1Q9UIW2 1896 aa9.97□□□□□ -0.81
GPATCH4-207ENST00000494414 HIP1O00291 1037 aa9.96□□□□□ -0.82
GPATCH4-207ENST00000494414 HSPD1P10809 573 aaKnown RBP9.96□□□□□ -0.82
GPATCH4-207ENST00000494414 VCAM1P19320 739 aa9.96□□□□□ -0.82
GPATCH4-207ENST00000494414 SP3Q02447 781 aa9.96□□□□□ -0.82
GPATCH4-207ENST00000494414 PPARAQ07869 468 aa9.96□□□□□ -0.82
GPATCH4-207ENST00000494414 PKN2Q16513 984 aaKnown RBP9.96□□□□□ -0.82
GPATCH4-207ENST00000494414 FAM110CQ1W6H9 321 aa9.96□□□□□ -0.82
GPATCH4-207ENST00000494414 SKOR2Q2VWA4 1001 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms