RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 LPAR1Q92633 364 aa23.59■■□□□ 1.37
SMC4-222ENST00000490207 TANGO6Q9C0B7 1094 aa23.59■■□□□ 1.37
SMC4-222ENST00000490207 NAPBQ9H115 298 aa23.59■■□□□ 1.37
SMC4-222ENST00000490207 KANSL2Q9H9L4 492 aa23.59■■□□□ 1.37
SMC4-222ENST00000490207 MKNK2Q9HBH9 465 aa23.59■■□□□ 1.37
SMC4-222ENST00000490207 RABGAP1Q9Y3P9 1069 aa23.59■■□□□ 1.37
SMC4-222ENST00000490207 SPDYE16A6NNV3 312 aaPredicted RBP23.58■■□□□ 1.37
SMC4-222ENST00000490207 CNMDO75829 334 aa23.58■■□□□ 1.37
SMC4-222ENST00000490207 MAPK4P31152 587 aa23.58■■□□□ 1.37
SMC4-222ENST00000490207 ATP2B2Q01814 1243 aa23.58■■□□□ 1.37
SMC4-222ENST00000490207 Q3C1V9 767 aa23.58■■□□□ 1.37
SMC4-222ENST00000490207 KIAA1755Q5JYT7 1200 aa23.58■■□□□ 1.37
SMC4-222ENST00000490207 CCAR1Q8IX12 1150 aaKnown RBP23.58■■□□□ 1.37
SMC4-222ENST00000490207 VCPKMTQ9H867 229 aa23.58■■□□□ 1.37
SMC4-222ENST00000490207 INHAP05111 366 aa23.57■■□□□ 1.36
SMC4-222ENST00000490207 CCL5P13501 91 aa23.57■■□□□ 1.36
SMC4-222ENST00000490207 EEF2P13639 858 aaKnown RBP23.57■■□□□ 1.36
SMC4-222ENST00000490207 IRX6P78412 446 aaPredicted RBP23.57■■□□□ 1.36
SMC4-222ENST00000490207 SOCS4Q8WXH5 440 aa23.57■■□□□ 1.36
SMC4-222ENST00000490207 PORCNQ9H237 461 aa23.57■■□□□ 1.36
SMC4-222ENST00000490207 ZNF287Q9HBT7 754 aa23.57■■□□□ 1.36
SMC4-222ENST00000490207 GJD2Q9UKL4 321 aa23.57■■□□□ 1.36
SMC4-222ENST00000490207 TRIM6-TRIM34B2RNG4 842 aa23.56■■□□□ 1.36
SMC4-222ENST00000490207 WDR46O15213 610 aaKnown RBP23.56■■□□□ 1.36
SMC4-222ENST00000490207 CCNA1P78396 465 aa23.56■■□□□ 1.36
SMC4-222ENST00000490207 SPICE1Q8N0Z3 855 aa23.56■■□□□ 1.36
SMC4-222ENST00000490207 CWC22Q9HCG8 908 aaKnown RBP23.56■■□□□ 1.36
SMC4-222ENST00000490207 HELLSQ9NRZ9 838 aa23.56■■□□□ 1.36
SMC4-222ENST00000490207 COL11A1P12107 1806 aaPredicted RBP23.55■■□□□ 1.36
SMC4-222ENST00000490207 GPR142Q7Z601 462 aa23.55■■□□□ 1.36
SMC4-222ENST00000490207 PLEKHM2Q8IWE5 1019 aa23.55■■□□□ 1.36
SMC4-222ENST00000490207 NUDT12Q9BQG2 462 aa23.55■■□□□ 1.36
SMC4-222ENST00000490207 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.55■■□□□ 1.36
SMC4-222ENST00000490207 RNF208Q9H0X6 261 aa23.55■■□□□ 1.36
SMC4-222ENST00000490207 PDE4DIPQ5VU43 2346 aa23.55■■□□□ 1.36
SMC4-222ENST00000490207 A0A0D9SFI3 127 aa23.54■■□□□ 1.36
SMC4-222ENST00000490207 FOXP2O15409 715 aa23.54■■□□□ 1.36
SMC4-222ENST00000490207 PRDM1O75626 825 aa23.54■■□□□ 1.36
SMC4-222ENST00000490207 PPARAQ07869 468 aa23.54■■□□□ 1.36
SMC4-222ENST00000490207 COG2Q14746 738 aa23.54■■□□□ 1.36
SMC4-222ENST00000490207 PLEKHH3Q7Z736 793 aa23.54■■□□□ 1.36
SMC4-222ENST00000490207 TICAM2Q86XR7 235 aa23.54■■□□□ 1.36
SMC4-222ENST00000490207 RILPL2Q969X0 211 aa23.54■■□□□ 1.36
SMC4-222ENST00000490207 UNC93B1Q9H1C4 597 aa23.54■■□□□ 1.36
SMC4-222ENST00000490207 OSBPL3Q9H4L5 887 aa23.54■■□□□ 1.36
SMC4-222ENST00000490207 GOPCQ9HD26 462 aa23.54■■□□□ 1.36
SMC4-222ENST00000490207 BTBD7Q9P203 1132 aa23.54■■□□□ 1.36
SMC4-222ENST00000490207 FLOT1O75955 427 aa23.53■■□□□ 1.36
SMC4-222ENST00000490207 HMGCRP04035 888 aa23.53■■□□□ 1.36
SMC4-222ENST00000490207 SLC3A2P08195 630 aaKnown RBP23.53■■□□□ 1.36
SMC4-222ENST00000490207 CYP2B6P20813 491 aa23.53■■□□□ 1.36
SMC4-222ENST00000490207 PDE4BQ07343 736 aa23.53■■□□□ 1.36
SMC4-222ENST00000490207 ZNF444Q8N0Y2 327 aaPredicted RBP23.53■■□□□ 1.36
SMC4-222ENST00000490207 SHISA4Q96DD7 197 aa23.53■■□□□ 1.36
SMC4-222ENST00000490207 FAM227BQ96M60 508 aa23.53■■□□□ 1.36
SMC4-222ENST00000490207 HOXC10Q9NYD6 342 aa23.53■■□□□ 1.36
SMC4-222ENST00000490207 PLIN4Q96Q06 1357 aa23.52■■□□□ 1.36
SMC4-222ENST00000490207 ZNF236Q9UL36 1845 aa23.52■■□□□ 1.36
SMC4-222ENST00000490207 RAD21O60216 631 aa23.52■■□□□ 1.36
SMC4-222ENST00000490207 GJB1P08034 283 aa23.52■■□□□ 1.36
SMC4-222ENST00000490207 VPS53Q5VIR6 699 aa23.52■■□□□ 1.36
SMC4-222ENST00000490207 WDR78Q5VTH9 848 aa23.52■■□□□ 1.36
SMC4-222ENST00000490207 NKX2-3Q8TAU0 364 aa23.52■■□□□ 1.36
SMC4-222ENST00000490207 NYAP2Q9P242 653 aa23.52■■□□□ 1.36
SMC4-222ENST00000490207 MKI67P46013 3256 aaKnown RBP23.51■■□□□ 1.35
SMC4-222ENST00000490207 IGKV6D-41A0A0C4DH26 115 aa23.51■■□□□ 1.35
SMC4-222ENST00000490207 DSG3P32926 999 aa23.51■■□□□ 1.35
SMC4-222ENST00000490207 GJA8P48165 433 aa23.51■■□□□ 1.35
SMC4-222ENST00000490207 NMIQ13287 307 aaPredicted RBP23.51■■□□□ 1.35
SMC4-222ENST00000490207 MCMDC2Q4G0Z9 681 aa23.51■■□□□ 1.35
SMC4-222ENST00000490207 RGS2P41220 211 aa23.5■■□□□ 1.35
SMC4-222ENST00000490207 MORN1Q5T089 497 aa23.5■■□□□ 1.35
SMC4-222ENST00000490207 SAMD1Q6SPF0 538 aaPredicted RBP23.5■■□□□ 1.35
SMC4-222ENST00000490207 MB21D1Q8N884 522 aa23.5■■□□□ 1.35
SMC4-222ENST00000490207 TRIB2Q92519 343 aa23.5■■□□□ 1.35
SMC4-222ENST00000490207 ATG4CQ96DT6 458 aa23.5■■□□□ 1.35
SMC4-222ENST00000490207 APBA2Q99767 749 aa23.5■■□□□ 1.35
SMC4-222ENST00000490207 TSPY3P0CV98 308 aa23.49■■□□□ 1.35
SMC4-222ENST00000490207 TSPY8P0CW00 308 aa23.49■■□□□ 1.35
SMC4-222ENST00000490207 XRCC5P13010 732 aaKnown RBP23.49■■□□□ 1.35
SMC4-222ENST00000490207 U2AF1L4Q8WU68 220 aaKnown RBP23.49■■□□□ 1.35
SMC4-222ENST00000490207 USP6NLQ92738 828 aa23.49■■□□□ 1.35
SMC4-222ENST00000490207 IVNS1ABPQ9Y6Y0 642 aa23.49■■□□□ 1.35
SMC4-222ENST00000490207 CCDC171Q6TFL3 1326 aa23.49■■□□□ 1.35
SMC4-222ENST00000490207 LAMA4Q16363 1823 aa23.48■■□□□ 1.35
SMC4-222ENST00000490207 ZKSCAN1P17029 563 aaPredicted RBP23.48■■□□□ 1.35
SMC4-222ENST00000490207 TRIM32Q13049 653 aa23.48■■□□□ 1.35
SMC4-222ENST00000490207 FAM83BQ5T0W9 1011 aa23.48■■□□□ 1.35
SMC4-222ENST00000490207 ZNF589Q86UQ0 364 aaPredicted RBP23.48■■□□□ 1.35
SMC4-222ENST00000490207 TRMT44Q8IYL2 757 aaKnown RBP23.48■■□□□ 1.35
SMC4-222ENST00000490207 CEP95Q96GE4 821 aa23.48■■□□□ 1.35
SMC4-222ENST00000490207 MOV10L1Q9BXT6 1211 aaKnown RBP23.48■■□□□ 1.35
SMC4-222ENST00000490207 SPATC1LQ9H0A9 340 aa23.48■■□□□ 1.35
SMC4-222ENST00000490207 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.48■■□□□ 1.35
SMC4-222ENST00000490207 PAK6Q9NQU5 681 aaPredicted RBP23.48■■□□□ 1.35
SMC4-222ENST00000490207 SDSP20132 328 aa23.47■■□□□ 1.35
SMC4-222ENST00000490207 PTPREP23469 700 aa23.47■■□□□ 1.35
SMC4-222ENST00000490207 CTDSPL2Q05D32 466 aa23.47■■□□□ 1.35
SMC4-222ENST00000490207 MAP2K5Q13163 448 aa23.47■■□□□ 1.35
SMC4-222ENST00000490207 ALX1Q15699 326 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms