RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 CHD9Q3L8U1 2897 aa13.15□□□□□ -0.3
PTP4A2-206ENST00000489313 TTC28Q96AY4 2481 aa13.15□□□□□ -0.3
PTP4A2-206ENST00000489313 GUCY1A2P33402 732 aa13.15□□□□□ -0.3
PTP4A2-206ENST00000489313 RTP1P59025 263 aa13.15□□□□□ -0.3
PTP4A2-206ENST00000489313 GJC2Q5T442 439 aaPredicted RBP13.15□□□□□ -0.3
PTP4A2-206ENST00000489313 ANO1Q5XXA6 986 aa13.15□□□□□ -0.3
PTP4A2-206ENST00000489313 ZKSCAN2Q63HK3 967 aa13.15□□□□□ -0.3
PTP4A2-206ENST00000489313 LBX2Q6XYB7 198 aa13.15□□□□□ -0.3
PTP4A2-206ENST00000489313 CABP5Q9NP86 173 aa13.15□□□□□ -0.3
PTP4A2-206ENST00000489313 NOP58Q9Y2X3 529 aaKnown RBP13.15□□□□□ -0.3
PTP4A2-206ENST00000489313 DNM1LO00429 736 aa13.14□□□□□ -0.31
PTP4A2-206ENST00000489313 MSCO60682 206 aa13.14□□□□□ -0.31
PTP4A2-206ENST00000489313 MAP3K12Q12852 859 aa13.14□□□□□ -0.31
PTP4A2-206ENST00000489313 SEPT2Q15019 361 aa13.14□□□□□ -0.31
PTP4A2-206ENST00000489313 CERS3Q8IU89 383 aa13.14□□□□□ -0.31
PTP4A2-206ENST00000489313 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.14□□□□□ -0.31
PTP4A2-206ENST00000489313 COL25A1Q9BXS0 654 aaPredicted RBP13.14□□□□□ -0.31
PTP4A2-206ENST00000489313 ATP11BQ9Y2G3 1177 aa13.14□□□□□ -0.31
PTP4A2-206ENST00000489313 ZNF236Q9UL36 1845 aa13.14□□□□□ -0.31
PTP4A2-206ENST00000489313 A0A1W2PRG0 241 aa13.13□□□□□ -0.31
PTP4A2-206ENST00000489313 IGHA2P01877 340 aa13.13□□□□□ -0.31
PTP4A2-206ENST00000489313 POLR3DP05423 398 aaPredicted RBP13.13□□□□□ -0.31
PTP4A2-206ENST00000489313 CYBAP13498 195 aa13.13□□□□□ -0.31
PTP4A2-206ENST00000489313 ADORA2AP29274 412 aa13.13□□□□□ -0.31
PTP4A2-206ENST00000489313 FAM109BQ6ICB4 259 aaPredicted RBP13.13□□□□□ -0.31
PTP4A2-206ENST00000489313 DPP9Q86TI2 863 aa13.13□□□□□ -0.31
PTP4A2-206ENST00000489313 RIOK1Q9BRS2 568 aaKnown RBP13.13□□□□□ -0.31
PTP4A2-206ENST00000489313 MOV10L1Q9BXT6 1211 aaKnown RBP13.13□□□□□ -0.31
PTP4A2-206ENST00000489313 PRKAG2Q9UGJ0 569 aa13.13□□□□□ -0.31
PTP4A2-206ENST00000489313 MYH8P13535 1937 aa13.13□□□□□ -0.31
PTP4A2-206ENST00000489313 MPHOSPH10O00566 681 aaKnown RBP13.12□□□□□ -0.31
PTP4A2-206ENST00000489313 MYCNP04198 464 aaPredicted RBP13.12□□□□□ -0.31
PTP4A2-206ENST00000489313 TANGO6Q9C0B7 1094 aa13.12□□□□□ -0.31
PTP4A2-206ENST00000489313 A0A0G2JMZ2 1700 aa13.12□□□□□ -0.31
PTP4A2-206ENST00000489313 ZNFX1Q9P2E3 1918 aaKnown RBP13.12□□□□□ -0.31
PTP4A2-206ENST00000489313 SMCHD1A6NHR9 2005 aa13.12□□□□□ -0.31
PTP4A2-206ENST00000489313 MUC3AQ02505 3323 aa13.12□□□□□ -0.31
PTP4A2-206ENST00000489313 MAGEB6P1A0A0J9YX57 407 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 COG2Q14746 738 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 ZNF697Q5TEC3 545 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 AACSQ86V21 672 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 ITPRIPQ8IWB1 547 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 SPATC1LQ9H0A9 340 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 PRDM5Q9NQX1 630 aaPredicted RBP13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 EXOC6BQ9Y2D4 811 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 KBTBD13C9JR72 458 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 COBLO75128 1261 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 RLBP1P12271 317 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 ERCC3P19447 782 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 GABPAQ06546 454 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 SHHQ15465 462 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 KIAA1755Q5JYT7 1200 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 PRAMEF19Q5SWL8 479 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 C9orf50Q5SZB4 431 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 OLFML2BQ68BL8 750 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 SLC39A5Q6ZMH5 540 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 FTSJ3Q8IY81 847 aaKnown RBP13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 ARRDC4Q8NCT1 418 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 MCM9Q9NXL9 1143 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 HOXC10Q9NYD6 342 aa13.11□□□□□ -0.31
PTP4A2-206ENST00000489313 COL11A1P12107 1806 aaPredicted RBP13.1□□□□□ -0.31
PTP4A2-206ENST00000489313 PARP14Q460N5 1801 aa13.1□□□□□ -0.31
PTP4A2-206ENST00000489313 STRNO43815 780 aa13.1□□□□□ -0.31
PTP4A2-206ENST00000489313 CYP2D6P10635 497 aa13.1□□□□□ -0.31
PTP4A2-206ENST00000489313 ADCYAP1R1P41586 468 aa13.1□□□□□ -0.31
PTP4A2-206ENST00000489313 PLS1Q14651 629 aa13.1□□□□□ -0.31
PTP4A2-206ENST00000489313 TRIM60Q495X7 471 aa13.1□□□□□ -0.31
PTP4A2-206ENST00000489313 CLEC10AQ8IUN9 316 aa13.1□□□□□ -0.31
PTP4A2-206ENST00000489313 SLC44A5Q8NCS7 719 aa13.1□□□□□ -0.31
PTP4A2-206ENST00000489313 BADQ92934 168 aa13.1□□□□□ -0.31
PTP4A2-206ENST00000489313 FERMT2Q96AC1 680 aa13.1□□□□□ -0.31
PTP4A2-206ENST00000489313 CRNKL1Q9BZJ0 848 aaKnown RBP13.1□□□□□ -0.31
PTP4A2-206ENST00000489313 BAZ2AQ9UIF9 1905 aaKnown RBP13.09□□□□□ -0.31
PTP4A2-206ENST00000489313 SEPT4O43236 478 aa13.09□□□□□ -0.31
PTP4A2-206ENST00000489313 PDE6AP16499 860 aa13.09□□□□□ -0.31
PTP4A2-206ENST00000489313 SLC9C2Q5TAH2 1124 aa13.09□□□□□ -0.31
PTP4A2-206ENST00000489313 CEP85Q6P2H3 762 aa13.09□□□□□ -0.31
PTP4A2-206ENST00000489313 SH3RF1Q7Z6J0 888 aa13.09□□□□□ -0.31
PTP4A2-206ENST00000489313 NCAPG2Q86XI2 1143 aa13.09□□□□□ -0.31
PTP4A2-206ENST00000489313 SHCBP1Q8NEM2 672 aa13.09□□□□□ -0.31
PTP4A2-206ENST00000489313 SDR42E1Q8WUS8 393 aa13.09□□□□□ -0.31
PTP4A2-206ENST00000489313 CDX2Q99626 313 aaPredicted RBP13.09□□□□□ -0.31
PTP4A2-206ENST00000489313 IL1RAPL2Q9NP60 686 aa13.09□□□□□ -0.31
PTP4A2-206ENST00000489313 REV3LO60673 3130 aa13.09□□□□□ -0.31
PTP4A2-206ENST00000489313 CCER2I3L3R5 266 aa13.08□□□□□ -0.32
PTP4A2-206ENST00000489313 LRRC41Q15345 812 aa13.08□□□□□ -0.32
PTP4A2-206ENST00000489313 FAM47AQ5JRC9 791 aa13.08□□□□□ -0.32
PTP4A2-206ENST00000489313 TMED8Q6PL24 325 aaPredicted RBP13.08□□□□□ -0.32
PTP4A2-206ENST00000489313 SPICE1Q8N0Z3 855 aa13.08□□□□□ -0.32
PTP4A2-206ENST00000489313 ATG4CQ96DT6 458 aa13.08□□□□□ -0.32
PTP4A2-206ENST00000489313 DYNLL2Q96FJ2 89 aa13.08□□□□□ -0.32
PTP4A2-206ENST00000489313 PDLIM7Q9NR12 457 aa13.08□□□□□ -0.32
PTP4A2-206ENST00000489313 CHD7Q9P2D1 2997 aa13.08□□□□□ -0.32
PTP4A2-206ENST00000489313 PLXNA1Q9UIW2 1896 aa13.08□□□□□ -0.32
PTP4A2-206ENST00000489313 ZNF532Q9HCE3 1301 aa13.08□□□□□ -0.32
PTP4A2-206ENST00000489313 TRIM43BA6NCK2 446 aa13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 FLOT1O75955 427 aa13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 SNX17Q15036 470 aa13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 TMEM179Q6ZVK1 233 aa13.07□□□□□ -0.32
PTP4A2-206ENST00000489313 LCORLQ8N3X6 602 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms