RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 SWAP70Q9UH65 585 aa22.26■■□□□ 1.15
HDAC6-231ENST00000488905 IVNS1ABPQ9Y6Y0 642 aa22.26■■□□□ 1.15
HDAC6-231ENST00000488905 MBD4O95243 580 aa22.25■■□□□ 1.15
HDAC6-231ENST00000488905 COL6A1P12109 1028 aa22.25■■□□□ 1.15
HDAC6-231ENST00000488905 GDF15Q99988 308 aa22.25■■□□□ 1.15
HDAC6-231ENST00000488905 BOLA2Q9H3K6 86 aa22.25■■□□□ 1.15
HDAC6-231ENST00000488905 FLRT1Q9NZU1 646 aa22.25■■□□□ 1.15
HDAC6-231ENST00000488905 ZNFX1Q9P2E3 1918 aaKnown RBP22.25■■□□□ 1.15
HDAC6-231ENST00000488905 SOX1O00570 391 aaPredicted RBP22.24■■□□□ 1.15
HDAC6-231ENST00000488905 HOXC6P09630 235 aa22.24■■□□□ 1.15
HDAC6-231ENST00000488905 ATP5JP18859 108 aa22.24■■□□□ 1.15
HDAC6-231ENST00000488905 MFSD14CQ5VZR4 134 aa22.24■■□□□ 1.15
HDAC6-231ENST00000488905 TANGO6Q9C0B7 1094 aa22.24■■□□□ 1.15
HDAC6-231ENST00000488905 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.24■■□□□ 1.157e-8■■□□□ 14.5
HDAC6-231ENST00000488905 CHMP4BQ9H444 224 aaKnown RBP22.24■■□□□ 1.15
HDAC6-231ENST00000488905 GREB1LQ9C091 1923 aaPredicted RBP22.23■■□□□ 1.15
HDAC6-231ENST00000488905 PRKAB2O43741 272 aa22.23■■□□□ 1.15
HDAC6-231ENST00000488905 SYN1P17600 705 aa22.23■■□□□ 1.15
HDAC6-231ENST00000488905 BMP8BP34820 402 aa22.23■■□□□ 1.15
HDAC6-231ENST00000488905 SLFNL1Q499Z3 407 aa22.23■■□□□ 1.15
HDAC6-231ENST00000488905 DYNLL2Q96FJ2 89 aa22.23■■□□□ 1.15
HDAC6-231ENST00000488905 HAUS7Q99871 368 aa22.23■■□□□ 1.15
HDAC6-231ENST00000488905 ATP8A2Q9NTI2 1148 aa22.23■■□□□ 1.15
HDAC6-231ENST00000488905 COG2Q14746 738 aa22.22■■□□□ 1.15
HDAC6-231ENST00000488905 CLEC10AQ8IUN9 316 aa22.22■■□□□ 1.15
HDAC6-231ENST00000488905 PLXNA1Q9UIW2 1896 aa22.22■■□□□ 1.15
HDAC6-231ENST00000488905 AKR1B1P15121 316 aa22.21■■□□□ 1.15
HDAC6-231ENST00000488905 MAGEA10P43363 369 aaPredicted RBP22.21■■□□□ 1.15
HDAC6-231ENST00000488905 ATP2B2Q01814 1243 aa22.21■■□□□ 1.15
HDAC6-231ENST00000488905 ICA1Q05084 483 aa22.21■■□□□ 1.15
HDAC6-231ENST00000488905 NPLOC4Q8TAT6 608 aa22.21■■□□□ 1.15
HDAC6-231ENST00000488905 LPAR1Q92633 364 aa22.21■■□□□ 1.15
HDAC6-231ENST00000488905 LRCH3Q96II8 777 aa22.21■■□□□ 1.15
HDAC6-231ENST00000488905 MOV10L1Q9BXT6 1211 aaKnown RBP22.21■■□□□ 1.15
HDAC6-231ENST00000488905 SPATC1LQ9H0A9 340 aa22.21■■□□□ 1.15
HDAC6-231ENST00000488905 ARHGEF10LQ9HCE6 1279 aa22.21■■□□□ 1.15
HDAC6-231ENST00000488905 HOXC10Q9NYD6 342 aa22.21■■□□□ 1.15
HDAC6-231ENST00000488905 RCAN3Q9UKA8 241 aa22.21■■□□□ 1.15
HDAC6-231ENST00000488905 KIAA1755Q5JYT7 1200 aa22.2■■□□□ 1.14
HDAC6-231ENST00000488905 AMOTL1Q8IY63 956 aa22.2■■□□□ 1.14
HDAC6-231ENST00000488905 SH2D4AQ9H788 454 aa22.2■■□□□ 1.14
HDAC6-231ENST00000488905 DDX20Q9UHI6 824 aaKnown RBP22.2■■□□□ 1.14
HDAC6-231ENST00000488905 MSCO60682 206 aa22.19■■□□□ 1.14
HDAC6-231ENST00000488905 CHGBP05060 677 aa22.19■■□□□ 1.14
HDAC6-231ENST00000488905 ADORA2AP29274 412 aa22.19■■□□□ 1.14
HDAC6-231ENST00000488905 UBE3CQ15386 1083 aa22.19■■□□□ 1.14
HDAC6-231ENST00000488905 LRRC26Q2I0M4 334 aa22.19■■□□□ 1.14
HDAC6-231ENST00000488905 C12orf60Q5U649 245 aa22.19■■□□□ 1.14
HDAC6-231ENST00000488905 MB21D1Q8N884 522 aa22.19■■□□□ 1.14
HDAC6-231ENST00000488905 SHCBP1Q8NEM2 672 aa22.19■■□□□ 1.14
HDAC6-231ENST00000488905 LRRCC1Q9C099 1032 aa22.19■■□□□ 1.14
HDAC6-231ENST00000488905 VCPKMTQ9H867 229 aa22.19■■□□□ 1.14
HDAC6-231ENST00000488905 MYH4Q9Y623 1939 aa22.18■■□□□ 1.14
HDAC6-231ENST00000488905 LTBP2Q14767 1821 aa22.18■■□□□ 1.14
HDAC6-231ENST00000488905 CYP2D7A0A087X1C5 515 aa22.18■■□□□ 1.14
HDAC6-231ENST00000488905 SMIM22K7EJ46 135 aa22.18■■□□□ 1.14
HDAC6-231ENST00000488905 FLOT1O75955 427 aa22.18■■□□□ 1.14
HDAC6-231ENST00000488905 IGHA2P01877 340 aa22.18■■□□□ 1.14
HDAC6-231ENST00000488905 CYP2C19P33261 490 aa22.18■■□□□ 1.14
HDAC6-231ENST00000488905 C16orf86Q6ZW13 317 aa22.18■■□□□ 1.14
HDAC6-231ENST00000488905 SPICE1Q8N0Z3 855 aa22.18■■□□□ 1.14
HDAC6-231ENST00000488905 DDRGK1Q96HY6 314 aa22.18■■□□□ 1.14
HDAC6-231ENST00000488905 CCDC17Q96LX7 622 aa22.18■■□□□ 1.14
HDAC6-231ENST00000488905 TMX2Q9Y320 296 aa22.18■■□□□ 1.14
HDAC6-231ENST00000488905 USP17L12C9JPN9 530 aa22.17■■□□□ 1.14
HDAC6-231ENST00000488905 USP17L21D6R901 530 aa22.17■■□□□ 1.14
HDAC6-231ENST00000488905 STRNO43815 780 aa22.17■■□□□ 1.14
HDAC6-231ENST00000488905 CYBAP13498 195 aa22.17■■□□□ 1.14
HDAC6-231ENST00000488905 ERCC3P19447 782 aa22.17■■□□□ 1.14
HDAC6-231ENST00000488905 CNGA1P29973 690 aa22.17■■□□□ 1.14
HDAC6-231ENST00000488905 DSG3P32926 999 aa22.17■■□□□ 1.14
HDAC6-231ENST00000488905 CDK8P49336 464 aa22.17■■□□□ 1.14
HDAC6-231ENST00000488905 DPP9Q86TI2 863 aa22.17■■□□□ 1.14
HDAC6-231ENST00000488905 SIAH1Q8IUQ4 282 aa22.17■■□□□ 1.14
HDAC6-231ENST00000488905 TRPV1Q8NER1 839 aa22.17■■□□□ 1.14
HDAC6-231ENST00000488905 WDR46O15213 610 aaKnown RBP22.16■■□□□ 1.14
HDAC6-231ENST00000488905 C20orf194Q5TEA3 1177 aa22.16■■□□□ 1.14
HDAC6-231ENST00000488905 OLFML2BQ68BL8 750 aa22.16■■□□□ 1.14
HDAC6-231ENST00000488905 ZSCAN25Q6NSZ9 544 aa22.16■■□□□ 1.14
HDAC6-231ENST00000488905 TDHQ8IZJ6 230 aa22.16■■□□□ 1.14
HDAC6-231ENST00000488905 ATG4CQ96DT6 458 aa22.16■■□□□ 1.14
HDAC6-231ENST00000488905 SLC4A4Q9Y6R1 1079 aa22.16■■□□□ 1.14
HDAC6-231ENST00000488905 A0A0C4DFX4 3053 aa22.16■■□□□ 1.14
HDAC6-231ENST00000488905 SMCHD1A6NHR9 2005 aa22.15■■□□□ 1.14
HDAC6-231ENST00000488905 SMARCA5O60264 1052 aaPredicted RBP22.15■■□□□ 1.14
HDAC6-231ENST00000488905 PLS1Q14651 629 aa22.15■■□□□ 1.14
HDAC6-231ENST00000488905 PUS7LQ9H0K6 701 aaKnown RBP22.15■■□□□ 1.14
HDAC6-231ENST00000488905 MROH8Q9H579 483 aa22.15■■□□□ 1.14
HDAC6-231ENST00000488905 DNM1LO00429 736 aa22.14■■□□□ 1.13
HDAC6-231ENST00000488905 LRIT3Q3SXY7 679 aa22.14■■□□□ 1.13
HDAC6-231ENST00000488905 NCAPG2Q86XI2 1143 aa22.14■■□□□ 1.13
HDAC6-231ENST00000488905 ABRAQ8N0Z2 381 aa22.14■■□□□ 1.13
HDAC6-231ENST00000488905 UBE2OQ9C0C9 1292 aaKnown RBP22.14■■□□□ 1.13
HDAC6-231ENST00000488905 SENP6Q9GZR1 1112 aaPredicted RBP22.14■■□□□ 1.13
HDAC6-231ENST00000488905 ARPP21Q9UBL0 812 aaPredicted RBP22.14■■□□□ 1.13
HDAC6-231ENST00000488905 COBLO75128 1261 aa22.13■■□□□ 1.13
HDAC6-231ENST00000488905 EEF2P13639 858 aaKnown RBP22.13■■□□□ 1.13
HDAC6-231ENST00000488905 CTR9Q6PD62 1173 aa22.13■■□□□ 1.13
HDAC6-231ENST00000488905 SAMD1Q6SPF0 538 aaPredicted RBP22.13■■□□□ 1.13
HDAC6-231ENST00000488905 SLC5A4Q9NY91 659 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms