RNA–Protein interactions for RNA: ENST00000488215.5

RERE-214, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 962 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-214ENST00000488215 SUPT16HQ9Y5B9 1047 aaKnown RBP11.69□□□□□ -0.54
RERE-214ENST00000488215 BRCA2P51587 3418 aa11.68□□□□□ -0.54
RERE-214ENST00000488215 PDE4DIPQ5VU43 2346 aa11.68□□□□□ -0.54
RERE-214ENST00000488215 TRIM6-TRIM34B2RNG4 842 aa11.68□□□□□ -0.54
RERE-214ENST00000488215 HMGCRP04035 888 aa11.68□□□□□ -0.54
RERE-214ENST00000488215 EEF2P13639 858 aaKnown RBP11.68□□□□□ -0.54
RERE-214ENST00000488215 CYP2B6P20813 491 aa11.68□□□□□ -0.54
RERE-214ENST00000488215 CCNA1P78396 465 aa11.68□□□□□ -0.54
RERE-214ENST00000488215 Q3C1V9 767 aa11.68□□□□□ -0.54
RERE-214ENST00000488215 SBK1Q52WX2 424 aa11.68□□□□□ -0.54
RERE-214ENST00000488215 KIAA1755Q5JYT7 1200 aa11.68□□□□□ -0.54
RERE-214ENST00000488215 ZMYM1Q5SVZ6 1142 aa11.68□□□□□ -0.54
RERE-214ENST00000488215 PRPF38BQ5VTL8 546 aaKnown RBP11.68□□□□□ -0.54
RERE-214ENST00000488215 POTEEQ6S8J3 1075 aa11.68□□□□□ -0.54
RERE-214ENST00000488215 GPR142Q7Z601 462 aa11.68□□□□□ -0.54
RERE-214ENST00000488215 LPAR1Q92633 364 aa11.68□□□□□ -0.54
RERE-214ENST00000488215 EVI5LQ96CN4 794 aa11.68□□□□□ -0.54
RERE-214ENST00000488215 NUDT12Q9BQG2 462 aa11.68□□□□□ -0.54
RERE-214ENST00000488215 TMX2Q9Y320 296 aa11.68□□□□□ -0.54
RERE-214ENST00000488215 RABGAP1Q9Y3P9 1069 aa11.68□□□□□ -0.54
RERE-214ENST00000488215 RLFQ13129 1914 aa11.67□□□□□ -0.54
RERE-214ENST00000488215 MYH4Q9Y623 1939 aa11.67□□□□□ -0.54
RERE-214ENST00000488215 WDR46O15213 610 aaKnown RBP11.67□□□□□ -0.54
RERE-214ENST00000488215 PRDM1O75626 825 aa11.67□□□□□ -0.54
RERE-214ENST00000488215 CNMDO75829 334 aa11.67□□□□□ -0.54
RERE-214ENST00000488215 FLOT1O75955 427 aa11.67□□□□□ -0.54
RERE-214ENST00000488215 GJB1P08034 283 aa11.67□□□□□ -0.54
RERE-214ENST00000488215 RASA1P20936 1047 aa11.67□□□□□ -0.54
RERE-214ENST00000488215 IRX6P78412 446 aaPredicted RBP11.67□□□□□ -0.54
RERE-214ENST00000488215 PLEKHH3Q7Z736 793 aa11.67□□□□□ -0.54
RERE-214ENST00000488215 SMC5Q8IY18 1101 aa11.67□□□□□ -0.54
RERE-214ENST00000488215 IFNL3Q8IZI9 196 aa11.67□□□□□ -0.54
RERE-214ENST00000488215 NKX2-3Q8TAU0 364 aa11.67□□□□□ -0.54
RERE-214ENST00000488215 U2AF1L4Q8WU68 220 aaKnown RBP11.67□□□□□ -0.54
RERE-214ENST00000488215 VCPKMTQ9H867 229 aa11.67□□□□□ -0.54
RERE-214ENST00000488215 KANSL2Q9H9L4 492 aa11.67□□□□□ -0.54
RERE-214ENST00000488215 GOPCQ9HD26 462 aa11.67□□□□□ -0.54
RERE-214ENST00000488215 BTBD7Q9P203 1132 aa11.67□□□□□ -0.54
RERE-214ENST00000488215 STAP2Q9UGK3 403 aa11.67□□□□□ -0.54
RERE-214ENST00000488215 GJD2Q9UKL4 321 aa11.67□□□□□ -0.54
RERE-214ENST00000488215 COL11A1P12107 1806 aaPredicted RBP11.66□□□□□ -0.54
RERE-214ENST00000488215 PATL2C9JE40 543 aaKnown RBP11.66□□□□□ -0.54
RERE-214ENST00000488215 IGHDP01880 384 aa11.66□□□□□ -0.54
RERE-214ENST00000488215 ZKSCAN1P17029 563 aaPredicted RBP11.66□□□□□ -0.54
RERE-214ENST00000488215 RGS2P41220 211 aa11.66□□□□□ -0.54
RERE-214ENST00000488215 GJA8P48165 433 aa11.66□□□□□ -0.54
RERE-214ENST00000488215 PPARAQ07869 468 aa11.66□□□□□ -0.54
RERE-214ENST00000488215 TRIM32Q13049 653 aa11.66□□□□□ -0.54
RERE-214ENST00000488215 PLS1Q14651 629 aa11.66□□□□□ -0.54
RERE-214ENST00000488215 COG2Q14746 738 aa11.66□□□□□ -0.54
RERE-214ENST00000488215 LBX2Q6XYB7 198 aa11.66□□□□□ -0.54
RERE-214ENST00000488215 CHD1LQ86WJ1 897 aa11.66□□□□□ -0.54
RERE-214ENST00000488215 SIAH1Q8IUQ4 282 aa11.66□□□□□ -0.54
RERE-214ENST00000488215 TRIB2Q92519 343 aa11.66□□□□□ -0.54
RERE-214ENST00000488215 RILPL2Q969X0 211 aa11.66□□□□□ -0.54
RERE-214ENST00000488215 ATG4CQ96DT6 458 aa11.66□□□□□ -0.54
RERE-214ENST00000488215 DEFB118Q96PH6 123 aa11.66□□□□□ -0.54
RERE-214ENST00000488215 APBA2Q99767 749 aa11.66□□□□□ -0.54
RERE-214ENST00000488215 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.66□□□□□ -0.546e-9■■■■■ 50.5
RERE-214ENST00000488215 ZNF287Q9HBT7 754 aa11.66□□□□□ -0.54
RERE-214ENST00000488215 IVNS1ABPQ9Y6Y0 642 aa11.66□□□□□ -0.54
RERE-214ENST00000488215 ZNF236Q9UL36 1845 aa11.65□□□□□ -0.54
RERE-214ENST00000488215 A0A0D9SFI3 127 aa11.65□□□□□ -0.54
RERE-214ENST00000488215 SLC3A2P08195 630 aaKnown RBP11.65□□□□□ -0.54
RERE-214ENST00000488215 PDE4BQ07343 736 aa11.65□□□□□ -0.54
RERE-214ENST00000488215 ZNF444Q8N0Y2 327 aaPredicted RBP11.65□□□□□ -0.54
RERE-214ENST00000488215 FAM227BQ96M60 508 aa11.65□□□□□ -0.54
RERE-214ENST00000488215 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.65□□□□□ -0.54
RERE-214ENST00000488215 FARP2O94887 1054 aaPredicted RBP11.64□□□□□ -0.55
RERE-214ENST00000488215 TSPY3P0CV98 308 aa11.64□□□□□ -0.55
RERE-214ENST00000488215 TSPY8P0CW00 308 aa11.64□□□□□ -0.55
RERE-214ENST00000488215 PRKAR2AP13861 404 aaKnown RBP11.64□□□□□ -0.55
RERE-214ENST00000488215 DSG3P32926 999 aa11.64□□□□□ -0.55
RERE-214ENST00000488215 NUCB1Q02818 461 aa11.64□□□□□ -0.55
RERE-214ENST00000488215 MAP2K5Q13163 448 aa11.64□□□□□ -0.55
RERE-214ENST00000488215 CCL14Q16627 93 aa11.64□□□□□ -0.55
RERE-214ENST00000488215 FAM83BQ5T0W9 1011 aa11.64□□□□□ -0.55
RERE-214ENST00000488215 VPS53Q5VIR6 699 aa11.64□□□□□ -0.55
RERE-214ENST00000488215 LRRC47Q8N1G4 583 aaKnown RBP11.64□□□□□ -0.55
RERE-214ENST00000488215 NUP88Q99567 741 aaPredicted RBP11.64□□□□□ -0.55
RERE-214ENST00000488215 MOV10L1Q9BXT6 1211 aaKnown RBP11.64□□□□□ -0.55
RERE-214ENST00000488215 SPATC1LQ9H0A9 340 aa11.64□□□□□ -0.55
RERE-214ENST00000488215 PAK6Q9NQU5 681 aaPredicted RBP11.64□□□□□ -0.55
RERE-214ENST00000488215 FBXO28Q9NVF7 368 aa11.64□□□□□ -0.55
RERE-214ENST00000488215 HOXC10Q9NYD6 342 aa11.64□□□□□ -0.55
RERE-214ENST00000488215 ISY1Q9ULR0 285 aaKnown RBP11.64□□□□□ -0.55
RERE-214ENST00000488215 PLIN4Q96Q06 1357 aa11.64□□□□□ -0.55
RERE-214ENST00000488215 FRMPD3Q5JV73 1810 aa11.63□□□□□ -0.55
RERE-214ENST00000488215 FOXP2O15409 715 aa11.63□□□□□ -0.55
RERE-214ENST00000488215 SGPL1O95470 568 aa11.63□□□□□ -0.55
RERE-214ENST00000488215 TFRCP02786 760 aaKnown RBP11.63□□□□□ -0.55
RERE-214ENST00000488215 XRCC5P13010 732 aaKnown RBP11.63□□□□□ -0.55
RERE-214ENST00000488215 PTPREP23469 700 aa11.63□□□□□ -0.55
RERE-214ENST00000488215 CTDSPL2Q05D32 466 aa11.63□□□□□ -0.55
RERE-214ENST00000488215 NMIQ13287 307 aaPredicted RBP11.63□□□□□ -0.55
RERE-214ENST00000488215 FAM47AQ5JRC9 791 aa11.63□□□□□ -0.55
RERE-214ENST00000488215 MORN1Q5T089 497 aa11.63□□□□□ -0.55
RERE-214ENST00000488215 NCAPG2Q86XI2 1143 aa11.63□□□□□ -0.55
RERE-214ENST00000488215 MB21D1Q8N884 522 aa11.63□□□□□ -0.55
RERE-214ENST00000488215 CEP95Q96GE4 821 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 282.6 ms