RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 CNTNAP5Q8WYK1 1306 aa9.99□□□□□ -0.81
NUDCD3-209ENST00000487118 TCP10L2B9ZVM9 353 aa9.98□□□□□ -0.81
NUDCD3-209ENST00000487118 PRPF3O43395 683 aaKnown RBP9.98□□□□□ -0.81
NUDCD3-209ENST00000487118 MYO1BO43795 1136 aa9.98□□□□□ -0.81
NUDCD3-209ENST00000487118 PPFIA3O75145 1194 aa9.98□□□□□ -0.81
NUDCD3-209ENST00000487118 PLEKHA8P1O95397 391 aa9.98□□□□□ -0.81
NUDCD3-209ENST00000487118 DEXIO95424 95 aa9.98□□□□□ -0.81
NUDCD3-209ENST00000487118 GNAQP50148 359 aa9.98□□□□□ -0.81
NUDCD3-209ENST00000487118 SKOR2Q2VWA4 1001 aaPredicted RBP9.98□□□□□ -0.81
NUDCD3-209ENST00000487118 NBPF9Q3BBW0 867 aa9.98□□□□□ -0.81
NUDCD3-209ENST00000487118 FERMT3Q86UX7 667 aa9.98□□□□□ -0.81
NUDCD3-209ENST00000487118 ZSCAN29Q8IWY8 852 aaPredicted RBP9.98□□□□□ -0.81
NUDCD3-209ENST00000487118 MICALL2Q8IY33 904 aa9.98□□□□□ -0.81
NUDCD3-209ENST00000487118 AIFM3Q96NN9 605 aa9.98□□□□□ -0.81
NUDCD3-209ENST00000487118 STX8Q9UNK0 236 aa9.98□□□□□ -0.81
NUDCD3-209ENST00000487118 PALM3A6NDB9 673 aaPredicted RBP9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 TRAK2O60296 914 aa9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 TBC1D12O60347 775 aa9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 DDNO94850 711 aaPredicted RBP9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 TTLL1O95922 423 aa9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 SLURP2P0DP57 97 aa9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 GUCY1A2P33402 732 aa9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 FOSBP53539 338 aa9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 GUCY1B3Q02153 619 aa9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 MAP3K10Q02779 954 aa9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 DNM1Q05193 864 aaKnown RBP9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 PKN1Q16512 942 aa9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 CERKLQ49MI3 558 aaPredicted RBP9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 KRT40Q6A162 431 aa9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 GPC2Q8N158 579 aa9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 SRBD1Q8N5C6 995 aaKnown RBP9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 CSRNP1Q96S65 589 aa9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 LZTS2Q9BRK4 669 aa9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 TRIM34Q9BYJ4 488 aa9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 MAD2L2Q9UI95 211 aa9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 CNOT7Q9UIV1 285 aaKnown RBP9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 CNPY2Q9Y2B0 182 aa9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 GJA3Q9Y6H8 435 aa9.97□□□□□ -0.81
NUDCD3-209ENST00000487118 MYH15Q9Y2K3 1946 aa9.96□□□□□ -0.81
NUDCD3-209ENST00000487118 FAM196BA6NMK8 535 aa9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 UBE2Q2LH0YL09 131 aa9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 PRPF40AO75400 957 aaKnown RBP9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 EGFRP00533 1210 aa9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 SNHG28P0DPA3 235 aa9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 SMARCA1P28370 1054 aa9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 TNNI2P48788 182 aa9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 KRT85P78386 507 aa9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 KIF23Q02241 960 aaPredicted RBP9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 DGKZQ13574 1117 aa9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 CSPP1Q1MSJ5 1256 aa9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 KIF4BQ2VIQ3 1234 aa9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 ATL3Q6DD88 541 aa9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 OTUD7BQ6GQQ9 843 aa9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 TMEM179Q6ZVK1 233 aa9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 BRAPQ7Z569 592 aa9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 CMTR1Q8N1G2 835 aaKnown RBP9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 MKL1Q969V6 931 aa9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 VEZTQ9HBM0 779 aa9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 GJB4Q9NTQ9 266 aa9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 GPRC5DQ9NZD1 345 aa9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 NYAP2Q9P242 653 aa9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 RBM27Q9P2N5 1060 aaKnown RBP9.96□□□□□ -0.82
NUDCD3-209ENST00000487118 H7C1D1 291 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 PDHBP11177 359 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 AKAP17AQ02040 695 aaKnown RBP9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 GRM1Q13255 1194 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 TNFAIP1Q13829 316 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 TRIM29Q14134 588 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 RRP1BQ14684 758 aaKnown RBP9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 ABCB5Q2M3G0 1257 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 SLC35G1Q2M3R5 365 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 KLHL40Q2TBA0 621 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 FOXD4L6Q3SYB3 417 aaPredicted RBP9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 ASPRV1Q53RT3 343 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 FAM173BQ6P4H8 233 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 FOXD4L3Q6VB84 417 aaPredicted RBP9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 SAMD7Q7Z3H4 446 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 USP48Q86UV5 1035 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 STAG2Q8N3U4 1231 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 CCDC82Q8N4S0 544 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 TEPSINQ96N21 525 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 BEGAINQ9BUH8 593 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 SPZ1Q9BXG8 430 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 TMEM39BQ9GZU3 492 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 KANSL2Q9H9L4 492 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 SYNPO2Q9UMS6 1093 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 V9GY48 417 aaPredicted RBP9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 ELP1O95163 1332 aa9.95□□□□□ -0.82
NUDCD3-209ENST00000487118 PDE4DIPQ5VU43 2346 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 CASP8AP2Q9UKL3 1982 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 SCN4AP35499 1836 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 KIF28PB7ZC32 967 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 MPHOSPH10O00566 681 aaKnown RBP9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 FIBPO43427 364 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 CYTH3O43739 400 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 MBD3O95983 291 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 MMP1P03956 469 aa9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 PARP1P09874 1014 aaKnown RBP9.94□□□□□ -0.82
NUDCD3-209ENST00000487118 U2AF2P26368 475 aaKnown RBP eCLIP9.94□□□□□ -0.822e-6■■□□□ 13.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms