RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 SIAH1Q8IUQ4 282 aa21.84■■□□□ 1.09
CLDN11-206ENST00000486429 PLEKHM2Q8IWE5 1019 aa21.84■■□□□ 1.09
CLDN11-206ENST00000486429 CCAR1Q8IX12 1150 aaKnown RBP21.84■■□□□ 1.09
CLDN11-206ENST00000486429 PXYLP1Q8TE99 480 aa21.84■■□□□ 1.09
CLDN11-206ENST00000486429 OSBPL3Q9H4L5 887 aa21.84■■□□□ 1.09
CLDN11-206ENST00000486429 VCPKMTQ9H867 229 aa21.84■■□□□ 1.09
CLDN11-206ENST00000486429 TNRC18O15417 2968 aaPredicted RBP21.84■■□□□ 1.09
CLDN11-206ENST00000486429 A0A0G2JMZ2 1700 aa21.83■■□□□ 1.09
CLDN11-206ENST00000486429 SLC3A2P08195 630 aaKnown RBP21.83■■□□□ 1.09
CLDN11-206ENST00000486429 ELNP15502 786 aa21.83■■□□□ 1.09
CLDN11-206ENST00000486429 LBX2Q6XYB7 198 aa21.83■■□□□ 1.09
CLDN11-206ENST00000486429 RILPL2Q969X0 211 aa21.83■■□□□ 1.09
CLDN11-206ENST00000486429 A0A0D9SFI3 127 aa21.82■■□□□ 1.08
CLDN11-206ENST00000486429 WDR46O15213 610 aaKnown RBP21.82■■□□□ 1.08
CLDN11-206ENST00000486429 CCNA1P78396 465 aa21.82■■□□□ 1.08
CLDN11-206ENST00000486429 PPARAQ07869 468 aa21.82■■□□□ 1.08
CLDN11-206ENST00000486429 MTFR1Q15390 333 aa21.82■■□□□ 1.08
CLDN11-206ENST00000486429 POTEEQ6S8J3 1075 aa21.82■■□□□ 1.08
CLDN11-206ENST00000486429 SPICE1Q8N0Z3 855 aa21.82■■□□□ 1.08
CLDN11-206ENST00000486429 SOCS4Q8WXH5 440 aa21.82■■□□□ 1.08
CLDN11-206ENST00000486429 FAM227BQ96M60 508 aa21.82■■□□□ 1.08
CLDN11-206ENST00000486429 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.82■■□□□ 1.08
CLDN11-206ENST00000486429 PORCNQ9H237 461 aa21.82■■□□□ 1.08
CLDN11-206ENST00000486429 CWC22Q9HCG8 908 aaKnown RBP21.82■■□□□ 1.08
CLDN11-206ENST00000486429 DOCK3Q8IZD9 2030 aa21.81■■□□□ 1.08
CLDN11-206ENST00000486429 FOXP2O15409 715 aa21.81■■□□□ 1.08
CLDN11-206ENST00000486429 PRDM1O75626 825 aa21.81■■□□□ 1.08
CLDN11-206ENST00000486429 CNMDO75829 334 aa21.81■■□□□ 1.08
CLDN11-206ENST00000486429 INHAP05111 366 aa21.81■■□□□ 1.08
CLDN11-206ENST00000486429 EN2P19622 333 aaPredicted RBP21.81■■□□□ 1.08
CLDN11-206ENST00000486429 PDE4BQ07343 736 aa21.81■■□□□ 1.08
CLDN11-206ENST00000486429 KIAA1755Q5JYT7 1200 aa21.81■■□□□ 1.08
CLDN11-206ENST00000486429 GOPCQ9HD26 462 aa21.81■■□□□ 1.08
CLDN11-206ENST00000486429 PLXNB2O15031 1838 aa21.8■■□□□ 1.08
CLDN11-206ENST00000486429 PLIN4Q96Q06 1357 aa21.8■■□□□ 1.08
CLDN11-206ENST00000486429 CCL5P13501 91 aa21.8■■□□□ 1.08
CLDN11-206ENST00000486429 NMIQ13287 307 aaPredicted RBP21.8■■□□□ 1.08
CLDN11-206ENST00000486429 COG2Q14746 738 aa21.8■■□□□ 1.08
CLDN11-206ENST00000486429 Q3C1V9 767 aa21.8■■□□□ 1.08
CLDN11-206ENST00000486429 MCMDC2Q4G0Z9 681 aa21.8■■□□□ 1.08
CLDN11-206ENST00000486429 VPS53Q5VIR6 699 aa21.8■■□□□ 1.08
CLDN11-206ENST00000486429 ZNF444Q8N0Y2 327 aaPredicted RBP21.8■■□□□ 1.08
CLDN11-206ENST00000486429 RAD21O60216 631 aa21.79■■□□□ 1.08
CLDN11-206ENST00000486429 FLOT1O75955 427 aa21.79■■□□□ 1.08
CLDN11-206ENST00000486429 GPR142Q7Z601 462 aa21.79■■□□□ 1.08
CLDN11-206ENST00000486429 NUDT12Q9BQG2 462 aa21.79■■□□□ 1.08
CLDN11-206ENST00000486429 HOXC10Q9NYD6 342 aa21.79■■□□□ 1.08
CLDN11-206ENST00000486429 BTBD7Q9P203 1132 aa21.79■■□□□ 1.08
CLDN11-206ENST00000486429 GJD2Q9UKL4 321 aa21.79■■□□□ 1.08
CLDN11-206ENST00000486429 CCDC171Q6TFL3 1326 aa21.79■■□□□ 1.08
CLDN11-206ENST00000486429 RLFQ13129 1914 aa21.78■■□□□ 1.08
CLDN11-206ENST00000486429 PARP14Q460N5 1801 aa21.78■■□□□ 1.08
CLDN11-206ENST00000486429 PLEKHH3Q7Z736 793 aa21.78■■□□□ 1.08
CLDN11-206ENST00000486429 RNF208Q9H0X6 261 aa21.78■■□□□ 1.08
CLDN11-206ENST00000486429 NYAP2Q9P242 653 aa21.78■■□□□ 1.08
CLDN11-206ENST00000486429 PDE4DIPQ5VU43 2346 aa21.78■■□□□ 1.08
CLDN11-206ENST00000486429 IGKV6D-41A0A0C4DH26 115 aa21.77■■□□□ 1.08
CLDN11-206ENST00000486429 HMGCRP04035 888 aa21.77■■□□□ 1.08
CLDN11-206ENST00000486429 TSPY3P0CV98 308 aa21.77■■□□□ 1.08
CLDN11-206ENST00000486429 TSPY8P0CW00 308 aa21.77■■□□□ 1.08
CLDN11-206ENST00000486429 SDSP20132 328 aa21.77■■□□□ 1.08
CLDN11-206ENST00000486429 DSG3P32926 999 aa21.77■■□□□ 1.08
CLDN11-206ENST00000486429 WDR78Q5VTH9 848 aa21.77■■□□□ 1.08
CLDN11-206ENST00000486429 MB21D1Q8N884 522 aa21.77■■□□□ 1.08
CLDN11-206ENST00000486429 NKX2-3Q8TAU0 364 aa21.77■■□□□ 1.08
CLDN11-206ENST00000486429 UNC93B1Q9H1C4 597 aa21.77■■□□□ 1.08
CLDN11-206ENST00000486429 GJB1P08034 283 aa21.76■■□□□ 1.07
CLDN11-206ENST00000486429 CYP2B6P20813 491 aa21.76■■□□□ 1.07
CLDN11-206ENST00000486429 RGS2P41220 211 aa21.76■■□□□ 1.07
CLDN11-206ENST00000486429 ALX1Q15699 326 aa21.76■■□□□ 1.07
CLDN11-206ENST00000486429 SAMD1Q6SPF0 538 aaPredicted RBP21.76■■□□□ 1.07
CLDN11-206ENST00000486429 ZNF589Q86UQ0 364 aaPredicted RBP21.76■■□□□ 1.07
CLDN11-206ENST00000486429 NEDD1Q8NHV4 660 aa21.76■■□□□ 1.07
CLDN11-206ENST00000486429 ATG4CQ96DT6 458 aa21.76■■□□□ 1.07
CLDN11-206ENST00000486429 CEP95Q96GE4 821 aa21.76■■□□□ 1.07
CLDN11-206ENST00000486429 DIAPH3Q9NSV4 1193 aa21.76■■□□□ 1.07
CLDN11-206ENST00000486429 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.76■■□□□ 1.07
CLDN11-206ENST00000486429 MYH4Q9Y623 1939 aa21.76■■□□□ 1.07
CLDN11-206ENST00000486429 ZMYM6O95789 1325 aa21.76■■□□□ 1.07
CLDN11-206ENST00000486429 MFAP1P55081 439 aaKnown RBP21.75■■□□□ 1.07
CLDN11-206ENST00000486429 CTDSPL2Q05D32 466 aa21.75■■□□□ 1.07
CLDN11-206ENST00000486429 FAM83BQ5T0W9 1011 aa21.75■■□□□ 1.07
CLDN11-206ENST00000486429 TRIB2Q92519 343 aa21.75■■□□□ 1.07
CLDN11-206ENST00000486429 SHISA4Q96DD7 197 aa21.75■■□□□ 1.07
CLDN11-206ENST00000486429 APBA2Q99767 749 aa21.75■■□□□ 1.07
CLDN11-206ENST00000486429 ANAPC4Q9UJX5 808 aa21.75■■□□□ 1.07
CLDN11-206ENST00000486429 IVNS1ABPQ9Y6Y0 642 aa21.75■■□□□ 1.07
CLDN11-206ENST00000486429 HIP1O00291 1037 aa21.74■■□□□ 1.07
CLDN11-206ENST00000486429 TTLL1O95922 423 aa21.74■■□□□ 1.07
CLDN11-206ENST00000486429 HSPD1P10809 573 aaKnown RBP21.74■■□□□ 1.07
CLDN11-206ENST00000486429 XRCC5P13010 732 aaKnown RBP21.74■■□□□ 1.07
CLDN11-206ENST00000486429 ZKSCAN1P17029 563 aaPredicted RBP21.74■■□□□ 1.07
CLDN11-206ENST00000486429 PDE4AP27815 886 aa21.74■■□□□ 1.07
CLDN11-206ENST00000486429 GJA8P48165 433 aa21.74■■□□□ 1.07
CLDN11-206ENST00000486429 TFAP4Q01664 338 aa21.74■■□□□ 1.07
CLDN11-206ENST00000486429 FAM47AQ5JRC9 791 aa21.74■■□□□ 1.07
CLDN11-206ENST00000486429 MORN1Q5T089 497 aa21.74■■□□□ 1.07
CLDN11-206ENST00000486429 TRMT44Q8IYL2 757 aaKnown RBP21.74■■□□□ 1.07
CLDN11-206ENST00000486429 MOV10L1Q9BXT6 1211 aaKnown RBP21.74■■□□□ 1.07
CLDN11-206ENST00000486429 SPATC1LQ9H0A9 340 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms