RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 ZKSCAN1P17029 563 aaPredicted RBP21.73■■□□□ 1.07
ATG4B-221ENST00000483778 PTPREP23469 700 aa21.73■■□□□ 1.07
ATG4B-221ENST00000483778 RGS2P41220 211 aa21.73■■□□□ 1.07
ATG4B-221ENST00000483778 UBE3CQ15386 1083 aa21.73■■□□□ 1.07
ATG4B-221ENST00000483778 WDR78Q5VTH9 848 aa21.73■■□□□ 1.07
ATG4B-221ENST00000483778 LHX8Q68G74 356 aa21.73■■□□□ 1.07
ATG4B-221ENST00000483778 NPLOC4Q8TAT6 608 aa21.73■■□□□ 1.07
ATG4B-221ENST00000483778 COG2Q14746 738 aa21.72■■□□□ 1.07
ATG4B-221ENST00000483778 CTR9Q6PD62 1173 aa21.72■■□□□ 1.07
ATG4B-221ENST00000483778 TMEM179Q6ZVK1 233 aa21.72■■□□□ 1.07
ATG4B-221ENST00000483778 SPICE1Q8N0Z3 855 aa21.72■■□□□ 1.07
ATG4B-221ENST00000483778 ANKLE1Q8NAG6 615 aa21.72■■□□□ 1.07
ATG4B-221ENST00000483778 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.72■■□□□ 1.072e-6■■□□□ 13.4
ATG4B-221ENST00000483778 DCTPP1Q9H773 170 aa21.72■■□□□ 1.07
ATG4B-221ENST00000483778 STAP2Q9UGK3 403 aa21.72■■□□□ 1.07
ATG4B-221ENST00000483778 SLC4A4Q9Y6R1 1079 aa21.72■■□□□ 1.07
ATG4B-221ENST00000483778 SLC15A5A6NIM6 579 aa21.71■■□□□ 1.07
ATG4B-221ENST00000483778 CAPN2P17655 700 aa21.71■■□□□ 1.07
ATG4B-221ENST00000483778 APBA2Q99767 749 aa21.71■■□□□ 1.07
ATG4B-221ENST00000483778 MOV10L1Q9BXT6 1211 aaKnown RBP21.71■■□□□ 1.07
ATG4B-221ENST00000483778 ECHDC1Q9NTX5 307 aa21.71■■□□□ 1.07
ATG4B-221ENST00000483778 SWAP70Q9UH65 585 aa21.71■■□□□ 1.07
ATG4B-221ENST00000483778 SMCHD1A6NHR9 2005 aa21.71■■□□□ 1.07
ATG4B-221ENST00000483778 A0A0G2JMZ2 1700 aa21.71■■□□□ 1.07
ATG4B-221ENST00000483778 DNAH12Q6ZR08 3092 aa21.7■■□□□ 1.06
ATG4B-221ENST00000483778 CCNA1P78396 465 aa21.7■■□□□ 1.06
ATG4B-221ENST00000483778 C16orf86Q6ZW13 317 aa21.7■■□□□ 1.06
ATG4B-221ENST00000483778 TRMT44Q8IYL2 757 aaKnown RBP21.7■■□□□ 1.06
ATG4B-221ENST00000483778 C7orf61Q8IZ16 206 aa21.7■■□□□ 1.06
ATG4B-221ENST00000483778 STRBPQ96SI9 672 aaKnown RBP21.7■■□□□ 1.06
ATG4B-221ENST00000483778 TANGO6Q9C0B7 1094 aa21.7■■□□□ 1.06
ATG4B-221ENST00000483778 NBPF3Q9H094 633 aa21.7■■□□□ 1.06
ATG4B-221ENST00000483778 CWC22Q9HCG8 908 aaKnown RBP21.7■■□□□ 1.06
ATG4B-221ENST00000483778 TMX2Q9Y320 296 aa21.7■■□□□ 1.06
ATG4B-221ENST00000483778 PCDHB15Q9Y5E8 787 aa21.7■■□□□ 1.06
ATG4B-221ENST00000483778 PFASO15067 1338 aa21.7■■□□□ 1.06
ATG4B-221ENST00000483778 TRPV1Q8NER1 839 aa21.69■■□□□ 1.06
ATG4B-221ENST00000483778 OSBP2Q969R2 916 aa21.69■■□□□ 1.06
ATG4B-221ENST00000483778 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.69■■□□□ 1.06
ATG4B-221ENST00000483778 C11orf49Q9H6J7 331 aa21.69■■□□□ 1.06
ATG4B-221ENST00000483778 HOXC10Q9NYD6 342 aa21.69■■□□□ 1.06
ATG4B-221ENST00000483778 ZMYND8Q9ULU4 1186 aaPredicted RBP21.69■■□□□ 1.06
ATG4B-221ENST00000483778 IGHA2P01877 340 aa21.68■■□□□ 1.06
ATG4B-221ENST00000483778 GRB14Q14449 540 aa21.68■■□□□ 1.06
ATG4B-221ENST00000483778 STK11IPQ8N1F8 1099 aa21.68■■□□□ 1.06
ATG4B-221ENST00000483778 ATG4CQ96DT6 458 aa21.68■■□□□ 1.06
ATG4B-221ENST00000483778 GREB1LQ9C091 1923 aaPredicted RBP21.68■■□□□ 1.06
ATG4B-221ENST00000483778 GSG1L2A8MUP6 293 aa21.67■■□□□ 1.06
ATG4B-221ENST00000483778 GLRX3O76003 335 aaKnown RBP21.67■■□□□ 1.06
ATG4B-221ENST00000483778 HOXC6P09630 235 aa21.67■■□□□ 1.06
ATG4B-221ENST00000483778 EEF2P13639 858 aaKnown RBP21.67■■□□□ 1.06
ATG4B-221ENST00000483778 SYN1P17600 705 aa21.67■■□□□ 1.06
ATG4B-221ENST00000483778 DSG3P32926 999 aa21.67■■□□□ 1.06
ATG4B-221ENST00000483778 CYP2C19P33261 490 aa21.67■■□□□ 1.06
ATG4B-221ENST00000483778 ICA1Q05084 483 aa21.67■■□□□ 1.06
ATG4B-221ENST00000483778 SAMD1Q6SPF0 538 aaPredicted RBP21.67■■□□□ 1.06
ATG4B-221ENST00000483778 OTUD7AQ8TE49 926 aaPredicted RBP21.67■■□□□ 1.06
ATG4B-221ENST00000483778 SPATC1LQ9H0A9 340 aa21.67■■□□□ 1.06
ATG4B-221ENST00000483778 VCPKMTQ9H867 229 aa21.67■■□□□ 1.06
ATG4B-221ENST00000483778 FBXO28Q9NVF7 368 aa21.67■■□□□ 1.06
ATG4B-221ENST00000483778 COBLO75128 1261 aa21.66■■□□□ 1.06
ATG4B-221ENST00000483778 COL6A1P12109 1028 aa21.66■■□□□ 1.06
ATG4B-221ENST00000483778 ERCC3P19447 782 aa21.66■■□□□ 1.06
ATG4B-221ENST00000483778 ATP2B2Q01814 1243 aa21.66■■□□□ 1.06
ATG4B-221ENST00000483778 KBTBD3Q8NAB2 608 aa21.66■■□□□ 1.06
ATG4B-221ENST00000483778 CCDC17Q96LX7 622 aa21.66■■□□□ 1.06
ATG4B-221ENST00000483778 MYH4Q9Y623 1939 aa21.65■■□□□ 1.06
ATG4B-221ENST00000483778 SOX1O00570 391 aaPredicted RBP21.65■■□□□ 1.06
ATG4B-221ENST00000483778 FLOT1O75955 427 aa21.65■■□□□ 1.06
ATG4B-221ENST00000483778 ZSCAN25Q6NSZ9 544 aa21.65■■□□□ 1.06
ATG4B-221ENST00000483778 ARHGEF10LQ9HCE6 1279 aa21.65■■□□□ 1.06
ATG4B-221ENST00000483778 IVNS1ABPQ9Y6Y0 642 aa21.65■■□□□ 1.06
ATG4B-221ENST00000483778 ADORA2AP29274 412 aa21.64■■□□□ 1.05
ATG4B-221ENST00000483778 PLS1Q14651 629 aa21.64■■□□□ 1.05
ATG4B-221ENST00000483778 MFSD14CQ5VZR4 134 aa21.64■■□□□ 1.05
ATG4B-221ENST00000483778 LPAR1Q92633 364 aa21.64■■□□□ 1.05
ATG4B-221ENST00000483778 PLXNA1Q9UIW2 1896 aa21.64■■□□□ 1.05
ATG4B-221ENST00000483778 ZNF236Q9UL36 1845 aa21.64■■□□□ 1.05
ATG4B-221ENST00000483778 M0R2C6 588 aa21.63■■□□□ 1.05
ATG4B-221ENST00000483778 RNF113AO15541 343 aaKnown RBP21.63■■□□□ 1.05
ATG4B-221ENST00000483778 RASA1P20936 1047 aa21.63■■□□□ 1.05
ATG4B-221ENST00000483778 CNGA1P29973 690 aa21.63■■□□□ 1.05
ATG4B-221ENST00000483778 TMEM132BQ14DG7 1078 aa21.63■■□□□ 1.05
ATG4B-221ENST00000483778 LRRC26Q2I0M4 334 aa21.63■■□□□ 1.05
ATG4B-221ENST00000483778 GDF15Q99988 308 aa21.63■■□□□ 1.05
ATG4B-221ENST00000483778 EPB41L4AQ9HCS5 686 aaPredicted RBP21.63■■□□□ 1.05
ATG4B-221ENST00000483778 ADAMTS5Q9UNA0 930 aa21.63■■□□□ 1.05
ATG4B-221ENST00000483778 MINDY4BA8MYZ0 360 aa21.62■■□□□ 1.05
ATG4B-221ENST00000483778 SBK1Q52WX2 424 aa21.62■■□□□ 1.05
ATG4B-221ENST00000483778 PRAMEF19Q5SWL8 479 aa21.62■■□□□ 1.05
ATG4B-221ENST00000483778 DPP9Q86TI2 863 aa21.62■■□□□ 1.05
ATG4B-221ENST00000483778 APPBP2Q92624 585 aa21.62■■□□□ 1.05
ATG4B-221ENST00000483778 SEC62Q99442 399 aaKnown RBP21.62■■□□□ 1.05
ATG4B-221ENST00000483778 KANSL2Q9H9L4 492 aa21.62■■□□□ 1.05
ATG4B-221ENST00000483778 WDR46O15213 610 aaKnown RBP21.61■■□□□ 1.05
ATG4B-221ENST00000483778 ANO1Q5XXA6 986 aa21.61■■□□□ 1.05
ATG4B-221ENST00000483778 NCAPG2Q86XI2 1143 aa21.61■■□□□ 1.05
ATG4B-221ENST00000483778 AMOTL1Q8IY63 956 aa21.61■■□□□ 1.05
ATG4B-221ENST00000483778 SHCBP1Q8NEM2 672 aa21.61■■□□□ 1.05
ATG4B-221ENST00000483778 DDRGK1Q96HY6 314 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms