RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 NAPBQ9H115 298 aa20.3■□□□□ 0.84
HSPG2-209ENST00000480900 VCPKMTQ9H867 229 aa20.3■□□□□ 0.84
HSPG2-209ENST00000480900 MKNK2Q9HBH9 465 aa20.3■□□□□ 0.84
HSPG2-209ENST00000480900 HELLSQ9NRZ9 838 aa20.3■□□□□ 0.84
HSPG2-209ENST00000480900 MKI67P46013 3256 aaKnown RBP20.3■□□□□ 0.84
HSPG2-209ENST00000480900 COL11A1P12107 1806 aaPredicted RBP20.3■□□□□ 0.84
HSPG2-209ENST00000480900 SPDYE16A6NNV3 312 aaPredicted RBP20.29■□□□□ 0.84
HSPG2-209ENST00000480900 PEX10O60683 326 aa20.29■□□□□ 0.84
HSPG2-209ENST00000480900 MYCP01106 439 aaPredicted RBP20.29■□□□□ 0.84
HSPG2-209ENST00000480900 EEF2P13639 858 aaKnown RBP20.29■□□□□ 0.84
HSPG2-209ENST00000480900 UBXN2AP68543 259 aa20.29■□□□□ 0.84
HSPG2-209ENST00000480900 BIN2Q9UBW5 565 aaPredicted RBP20.29■□□□□ 0.84
HSPG2-209ENST00000480900 GJD2Q9UKL4 321 aa20.29■□□□□ 0.84
HSPG2-209ENST00000480900 CNMDO75829 334 aa20.28■□□□□ 0.84
HSPG2-209ENST00000480900 CCNA1P78396 465 aa20.28■□□□□ 0.84
HSPG2-209ENST00000480900 MTFR1Q15390 333 aa20.28■□□□□ 0.84
HSPG2-209ENST00000480900 Q3C1V9 767 aa20.28■□□□□ 0.84
HSPG2-209ENST00000480900 KIAA1755Q5JYT7 1200 aa20.28■□□□□ 0.84
HSPG2-209ENST00000480900 CCDC129Q6ZRS4 1044 aa20.28■□□□□ 0.84
HSPG2-209ENST00000480900 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.28■□□□□ 0.84
HSPG2-209ENST00000480900 TANGO6Q9C0B7 1094 aa20.28■□□□□ 0.84
HSPG2-209ENST00000480900 TRIM6-TRIM34B2RNG4 842 aa20.27■□□□□ 0.84
HSPG2-209ENST00000480900 WDR46O15213 610 aaKnown RBP20.27■□□□□ 0.84
HSPG2-209ENST00000480900 FOXP2O15409 715 aa20.27■□□□□ 0.84
HSPG2-209ENST00000480900 SLC3A2P08195 630 aaKnown RBP20.27■□□□□ 0.84
HSPG2-209ENST00000480900 ELNP15502 786 aa20.27■□□□□ 0.84
HSPG2-209ENST00000480900 EN2P19622 333 aaPredicted RBP20.27■□□□□ 0.84
HSPG2-209ENST00000480900 IRX6P78412 446 aaPredicted RBP20.27■□□□□ 0.84
HSPG2-209ENST00000480900 COG2Q14746 738 aa20.27■□□□□ 0.84
HSPG2-209ENST00000480900 CCAR1Q8IX12 1150 aaKnown RBP20.27■□□□□ 0.84
HSPG2-209ENST00000480900 STK11IPQ8N1F8 1099 aa20.27■□□□□ 0.84
HSPG2-209ENST00000480900 SOCS4Q8WXH5 440 aa20.27■□□□□ 0.84
HSPG2-209ENST00000480900 PORCNQ9H237 461 aa20.27■□□□□ 0.84
HSPG2-209ENST00000480900 HOXC10Q9NYD6 342 aa20.27■□□□□ 0.84
HSPG2-209ENST00000480900 PLIN4Q96Q06 1357 aa20.26■□□□□ 0.83
HSPG2-209ENST00000480900 A0A0D9SFI3 127 aa20.26■□□□□ 0.83
HSPG2-209ENST00000480900 INHAP05111 366 aa20.26■□□□□ 0.83
HSPG2-209ENST00000480900 CCL5P13501 91 aa20.26■□□□□ 0.83
HSPG2-209ENST00000480900 ATP2B2Q01814 1243 aa20.26■□□□□ 0.83
HSPG2-209ENST00000480900 PDE4BQ07343 736 aa20.26■□□□□ 0.83
HSPG2-209ENST00000480900 PPARAQ07869 468 aa20.26■□□□□ 0.83
HSPG2-209ENST00000480900 MCMDC2Q4G0Z9 681 aa20.26■□□□□ 0.83
HSPG2-209ENST00000480900 SPICE1Q8N0Z3 855 aa20.26■□□□□ 0.83
HSPG2-209ENST00000480900 FAM227BQ96M60 508 aa20.26■□□□□ 0.83
HSPG2-209ENST00000480900 GOPCQ9HD26 462 aa20.26■□□□□ 0.83
HSPG2-209ENST00000480900 NYAP2Q9P242 653 aa20.26■□□□□ 0.83
HSPG2-209ENST00000480900 ZNFX1Q9P2E3 1918 aaKnown RBP20.25■□□□□ 0.83
HSPG2-209ENST00000480900 CEP290O15078 2479 aa20.25■□□□□ 0.83
HSPG2-209ENST00000480900 ALX1Q15699 326 aa20.25■□□□□ 0.83
HSPG2-209ENST00000480900 GPR142Q7Z601 462 aa20.25■□□□□ 0.83
HSPG2-209ENST00000480900 ZNF444Q8N0Y2 327 aaPredicted RBP20.25■□□□□ 0.83
HSPG2-209ENST00000480900 NKX2-3Q8TAU0 364 aa20.25■□□□□ 0.83
HSPG2-209ENST00000480900 RILPL2Q969X0 211 aa20.25■□□□□ 0.83
HSPG2-209ENST00000480900 NUDT12Q9BQG2 462 aa20.25■□□□□ 0.83
HSPG2-209ENST00000480900 BTBD7Q9P203 1132 aa20.25■□□□□ 0.83
HSPG2-209ENST00000480900 IGKV6D-41A0A0C4DH26 115 aa20.24■□□□□ 0.83
HSPG2-209ENST00000480900 PRDM1O75626 825 aa20.24■□□□□ 0.83
HSPG2-209ENST00000480900 FLOT1O75955 427 aa20.24■□□□□ 0.83
HSPG2-209ENST00000480900 HMGCRP04035 888 aa20.24■□□□□ 0.83
HSPG2-209ENST00000480900 GJB1P08034 283 aa20.24■□□□□ 0.83
HSPG2-209ENST00000480900 NMIQ13287 307 aaPredicted RBP20.24■□□□□ 0.83
HSPG2-209ENST00000480900 PLEKHH3Q7Z736 793 aa20.24■□□□□ 0.83
HSPG2-209ENST00000480900 MB21D1Q8N884 522 aa20.24■□□□□ 0.83
HSPG2-209ENST00000480900 RNF208Q9H0X6 261 aa20.24■□□□□ 0.83
HSPG2-209ENST00000480900 ZNF236Q9UL36 1845 aa20.24■□□□□ 0.83
HSPG2-209ENST00000480900 XRCC5P13010 732 aaKnown RBP20.23■□□□□ 0.83
HSPG2-209ENST00000480900 DSG3P32926 999 aa20.23■□□□□ 0.83
HSPG2-209ENST00000480900 MORN1Q5T089 497 aa20.23■□□□□ 0.83
HSPG2-209ENST00000480900 VPS53Q5VIR6 699 aa20.23■□□□□ 0.83
HSPG2-209ENST00000480900 USP6NLQ92738 828 aa20.23■□□□□ 0.83
HSPG2-209ENST00000480900 UNC93B1Q9H1C4 597 aa20.23■□□□□ 0.83
HSPG2-209ENST00000480900 LAMA4Q16363 1823 aa20.23■□□□□ 0.83
HSPG2-209ENST00000480900 SDSP20132 328 aa20.22■□□□□ 0.83
HSPG2-209ENST00000480900 GJA8P48165 433 aa20.22■□□□□ 0.83
HSPG2-209ENST00000480900 NEDD1Q8NHV4 660 aa20.22■□□□□ 0.83
HSPG2-209ENST00000480900 CWC22Q9HCG8 908 aaKnown RBP20.22■□□□□ 0.83
HSPG2-209ENST00000480900 ANAPC4Q9UJX5 808 aa20.22■□□□□ 0.83
HSPG2-209ENST00000480900 SYNPO2Q9UMS6 1093 aa20.22■□□□□ 0.83
HSPG2-209ENST00000480900 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.22■□□□□ 0.83
HSPG2-209ENST00000480900 ZMYM6O95789 1325 aa20.22■□□□□ 0.83
HSPG2-209ENST00000480900 CCDC171Q6TFL3 1326 aa20.22■□□□□ 0.83
HSPG2-209ENST00000480900 TSPY3P0CV98 308 aa20.21■□□□□ 0.83
HSPG2-209ENST00000480900 TSPY8P0CW00 308 aa20.21■□□□□ 0.83
HSPG2-209ENST00000480900 CYP2B6P20813 491 aa20.21■□□□□ 0.83
HSPG2-209ENST00000480900 RGS2P41220 211 aa20.21■□□□□ 0.83
HSPG2-209ENST00000480900 ZNF589Q86UQ0 364 aaPredicted RBP20.21■□□□□ 0.83
HSPG2-209ENST00000480900 TRMT44Q8IYL2 757 aaKnown RBP20.21■□□□□ 0.83
HSPG2-209ENST00000480900 TRIB2Q92519 343 aa20.21■□□□□ 0.83
HSPG2-209ENST00000480900 MKL1Q969V6 931 aa20.21■□□□□ 0.83
HSPG2-209ENST00000480900 SHISA4Q96DD7 197 aa20.21■□□□□ 0.83
HSPG2-209ENST00000480900 CEP95Q96GE4 821 aa20.21■□□□□ 0.83
HSPG2-209ENST00000480900 APBA2Q99767 749 aa20.21■□□□□ 0.83
HSPG2-209ENST00000480900 MTMR4Q9NYA4 1195 aa20.21■□□□□ 0.83
HSPG2-209ENST00000480900 IVNS1ABPQ9Y6Y0 642 aa20.21■□□□□ 0.83
HSPG2-209ENST00000480900 SLC15A5A6NIM6 579 aa20.2■□□□□ 0.82
HSPG2-209ENST00000480900 RAD21O60216 631 aa20.2■□□□□ 0.82
HSPG2-209ENST00000480900 TTLL1O95922 423 aa20.2■□□□□ 0.82
HSPG2-209ENST00000480900 HSPD1P10809 573 aaKnown RBP20.2■□□□□ 0.82
HSPG2-209ENST00000480900 MFAP1P55081 439 aaKnown RBP20.2■□□□□ 0.82
HSPG2-209ENST00000480900 CTDSPL2Q05D32 466 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms