RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 PMS1P54277 932 aaKnown RBP7.45□□□□□ -1.22
RFC4-212ENST00000479307 CHMP4BP1P59074 171 aa7.45□□□□□ -1.22
RFC4-212ENST00000479307 VHLLQ6RSH7 139 aa7.45□□□□□ -1.22
RFC4-212ENST00000479307 BAHD1Q8TBE0 780 aaPredicted RBP7.45□□□□□ -1.22
RFC4-212ENST00000479307 XAGE3Q8WTP9 111 aa7.45□□□□□ -1.22
RFC4-212ENST00000479307 PPP1R13LQ8WUF5 828 aa7.45□□□□□ -1.22
RFC4-212ENST00000479307 TP53INP1Q96A56 240 aa7.45□□□□□ -1.22
RFC4-212ENST00000479307 MRFAP1L1Q96HT8 127 aa7.45□□□□□ -1.22
RFC4-212ENST00000479307 SLC6A18Q96N87 628 aa7.45□□□□□ -1.22
RFC4-212ENST00000479307 SUCOQ9UBS9 1254 aaKnown RBP7.45□□□□□ -1.22
RFC4-212ENST00000479307 ZNF214Q9UL59 606 aaPredicted RBP7.45□□□□□ -1.22
RFC4-212ENST00000479307 LTBP3Q9NS15 1303 aa7.45□□□□□ -1.22
RFC4-212ENST00000479307 DIP2BQ9P265 1576 aa7.45□□□□□ -1.22
RFC4-212ENST00000479307 SYNJ2O15056 1496 aa7.44□□□□□ -1.22
RFC4-212ENST00000479307 DDAH1O94760 285 aa7.44□□□□□ -1.22
RFC4-212ENST00000479307 SLITRK5O94991 958 aa7.44□□□□□ -1.22
RFC4-212ENST00000479307 RNF4P78317 190 aa7.44□□□□□ -1.22
RFC4-212ENST00000479307 RASA3Q14644 834 aa7.44□□□□□ -1.22
RFC4-212ENST00000479307 BMS1Q14692 1282 aaKnown RBP7.44□□□□□ -1.22
RFC4-212ENST00000479307 PLA2G4EQ3MJ16 856 aa7.44□□□□□ -1.22
RFC4-212ENST00000479307 PRR23CQ6ZRP0 262 aa7.44□□□□□ -1.22
RFC4-212ENST00000479307 FAM178BQ8IXR5 827 aa7.44□□□□□ -1.22
RFC4-212ENST00000479307 DNAJB8Q8NHS0 232 aa7.44□□□□□ -1.22
RFC4-212ENST00000479307 DEPDC7Q96QD5 511 aa7.44□□□□□ -1.22
RFC4-212ENST00000479307 SRPK1Q96SB4 655 aaKnown RBP7.44□□□□□ -1.22
RFC4-212ENST00000479307 LGR6Q9HBX8 967 aa7.44□□□□□ -1.22
RFC4-212ENST00000479307 SNTG2Q9NY99 539 aa7.44□□□□□ -1.22
RFC4-212ENST00000479307 STOML1Q9UBI4 398 aa7.44□□□□□ -1.22
RFC4-212ENST00000479307 ABCC10Q5T3U5 1492 aa7.43□□□□□ -1.22
RFC4-212ENST00000479307 TOP2AP11388 1531 aaKnown RBP7.43□□□□□ -1.22
RFC4-212ENST00000479307 GJB6O95452 261 aa7.43□□□□□ -1.22
RFC4-212ENST00000479307 CYP7A1P22680 504 aa7.43□□□□□ -1.22
RFC4-212ENST00000479307 SLC7A5Q01650 507 aa7.43□□□□□ -1.22
RFC4-212ENST00000479307 CDK5R2Q13319 367 aa7.43□□□□□ -1.22
RFC4-212ENST00000479307 RASGRF1Q13972 1273 aa7.43□□□□□ -1.22
RFC4-212ENST00000479307 C6orf15Q6UXA7 325 aaPredicted RBP7.43□□□□□ -1.22
RFC4-212ENST00000479307 TMEM192Q8IY95 271 aa7.43□□□□□ -1.22
RFC4-212ENST00000479307 DUSP23Q9BVJ7 150 aa7.43□□□□□ -1.22
RFC4-212ENST00000479307 ASPNQ9BXN1 380 aa7.43□□□□□ -1.22
RFC4-212ENST00000479307 ST7Q9NRC1 585 aa7.43□□□□□ -1.22
RFC4-212ENST00000479307 FAM86C2PA6NEL3 165 aa7.42□□□□□ -1.22
RFC4-212ENST00000479307 PDPK1O15530 556 aa7.42□□□□□ -1.22
RFC4-212ENST00000479307 ZNF143P52747 638 aaPredicted RBP7.42□□□□□ -1.22
RFC4-212ENST00000479307 GNPTABQ3T906 1256 aa7.42□□□□□ -1.22
RFC4-212ENST00000479307 TOP6BLQ8N6T0 577 aa7.42□□□□□ -1.22
RFC4-212ENST00000479307 RNF141Q8WVD5 230 aa7.42□□□□□ -1.22
RFC4-212ENST00000479307 KLHL6Q8WZ60 621 aa7.42□□□□□ -1.22
RFC4-212ENST00000479307 ZNF669Q96BR6 464 aaPredicted RBP7.42□□□□□ -1.22
RFC4-212ENST00000479307 TBC1D32Q96NH3 1257 aa7.42□□□□□ -1.22
RFC4-212ENST00000479307 SPOCK3Q9BQ16 436 aa7.42□□□□□ -1.22
RFC4-212ENST00000479307 EPN3Q9H201 632 aa7.42□□□□□ -1.22
RFC4-212ENST00000479307 PIF1Q9H611 641 aa7.42□□□□□ -1.22
RFC4-212ENST00000479307 C7orf69Q9H7B7 122 aa7.42□□□□□ -1.22
RFC4-212ENST00000479307 HMX2A2RU54 273 aa7.41□□□□□ -1.22
RFC4-212ENST00000479307 GSC2O15499 205 aa7.41□□□□□ -1.22
RFC4-212ENST00000479307 NAT2P11245 290 aa7.41□□□□□ -1.22
RFC4-212ENST00000479307 CYP27A1Q02318 531 aa7.41□□□□□ -1.22
RFC4-212ENST00000479307 OGFOD3Q6PK18 319 aa7.41□□□□□ -1.22
RFC4-212ENST00000479307 EEPD1Q7L9B9 569 aa7.41□□□□□ -1.22
RFC4-212ENST00000479307 ZAR1Q86SH2 424 aa7.41□□□□□ -1.22
RFC4-212ENST00000479307 ST13P5Q8NFI4 369 aaPredicted RBP7.41□□□□□ -1.22
RFC4-212ENST00000479307 MICAL1Q8TDZ2 1067 aa7.41□□□□□ -1.22
RFC4-212ENST00000479307 GATA6Q92908 595 aa7.41□□□□□ -1.22
RFC4-212ENST00000479307 FBXL18Q96ME1 805 aa7.41□□□□□ -1.22
RFC4-212ENST00000479307 KREMEN1Q96MU8 473 aa7.41□□□□□ -1.22
RFC4-212ENST00000479307 TPSG1Q9NRR2 321 aa7.41□□□□□ -1.22
RFC4-212ENST00000479307 TPX2Q9ULW0 747 aaKnown RBP7.41□□□□□ -1.22
RFC4-212ENST00000479307 MAPKBP1O60336 1514 aa7.41□□□□□ -1.22
RFC4-212ENST00000479307 SHROOM2Q13796 1616 aa7.41□□□□□ -1.22
RFC4-212ENST00000479307 LOC105371045A0A1W2PR82 267 aa7.4□□□□□ -1.22
RFC4-212ENST00000479307 EOMESO95936 686 aa7.4□□□□□ -1.22
RFC4-212ENST00000479307 H2AFB1P0C5Y9 115 aa7.4□□□□□ -1.22
RFC4-212ENST00000479307 H2AFB2P0C5Z0 115 aa7.4□□□□□ -1.22
RFC4-212ENST00000479307 FAM87AP0C7U9 286 aa7.4□□□□□ -1.22
RFC4-212ENST00000479307 IFRD2Q12894 506 aaPredicted RBP7.4□□□□□ -1.22
RFC4-212ENST00000479307 CYP27C1Q4G0S4 372 aa7.4□□□□□ -1.22
RFC4-212ENST00000479307 ANKRD39Q53RE8 183 aa7.4□□□□□ -1.22
RFC4-212ENST00000479307 NBPF12Q5TAG4 269 aaPredicted RBP7.4□□□□□ -1.22
RFC4-212ENST00000479307 RNF43Q68DV7 783 aa7.4□□□□□ -1.22
RFC4-212ENST00000479307 KIAA1211LQ6NV74 962 aa7.4□□□□□ -1.22
RFC4-212ENST00000479307 CDH24Q86UP0 819 aa7.4□□□□□ -1.22
RFC4-212ENST00000479307 RIN3Q8TB24 985 aa7.4□□□□□ -1.22
RFC4-212ENST00000479307 VWCEQ96DN2 955 aa7.4□□□□□ -1.22
RFC4-212ENST00000479307 PRDM5Q9NQX1 630 aaPredicted RBP7.4□□□□□ -1.22
RFC4-212ENST00000479307 GTF2IRD1Q9UHL9 959 aa7.4□□□□□ -1.22
RFC4-212ENST00000479307 TMA7Q9Y2S6 64 aaKnown RBP7.4□□□□□ -1.22
RFC4-212ENST00000479307 COL17A1Q9UMD9 1497 aaPredicted RBP7.4□□□□□ -1.22
RFC4-212ENST00000479307 CEP170Q5SW79 1584 aa7.4□□□□□ -1.22
RFC4-212ENST00000479307 PBRM1Q86U86 1689 aa7.4□□□□□ -1.23
RFC4-212ENST00000479307 RAD54L2Q9Y4B4 1467 aa7.39□□□□□ -1.23
RFC4-212ENST00000479307 CCDC85CA6NKD9 419 aa7.39□□□□□ -1.23
RFC4-212ENST00000479307 B2RBV5 119 aa7.39□□□□□ -1.23
RFC4-212ENST00000479307 ITGB2P05107 769 aa7.39□□□□□ -1.23
RFC4-212ENST00000479307 KIR3DL1P43629 444 aa7.39□□□□□ -1.23
RFC4-212ENST00000479307 CPSF6Q16630 551 aaKnown RBP eCLIP7.39□□□□□ -1.232e-9■□□□□ 10.6
RFC4-212ENST00000479307 GIMAP6Q6P9H5 292 aa7.39□□□□□ -1.23
RFC4-212ENST00000479307 C22orf34Q6ZV56 151 aa7.39□□□□□ -1.23
RFC4-212ENST00000479307 PPFIBP1Q86W92 1011 aa7.39□□□□□ -1.23
RFC4-212ENST00000479307 CCDC144CPQ8IYA2 1237 aa7.39□□□□□ -1.23
RFC4-212ENST00000479307 DBNDD2Q9BQY9 259 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms