RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 ELNP15502 786 aa26.91■■□□□ 1.9
PTP4A1-203ENST00000473334 MAPK4P31152 587 aa26.91■■□□□ 1.9
PTP4A1-203ENST00000473334 Q3C1V9 767 aa26.91■■□□□ 1.9
PTP4A1-203ENST00000473334 CCDC129Q6ZRS4 1044 aa26.91■■□□□ 1.9
PTP4A1-203ENST00000473334 VCPKMTQ9H867 229 aa26.91■■□□□ 1.9
PTP4A1-203ENST00000473334 ZNF287Q9HBT7 754 aa26.91■■□□□ 1.9
PTP4A1-203ENST00000473334 SPDYE16A6NNV3 312 aaPredicted RBP26.9■■□□□ 1.9
PTP4A1-203ENST00000473334 CNMDO75829 334 aa26.9■■□□□ 1.9
PTP4A1-203ENST00000473334 EEF2P13639 858 aaKnown RBP26.9■■□□□ 1.9
PTP4A1-203ENST00000473334 KIAA1755Q5JYT7 1200 aa26.9■■□□□ 1.9
PTP4A1-203ENST00000473334 PLEKHM2Q8IWE5 1019 aa26.9■■□□□ 1.9
PTP4A1-203ENST00000473334 CCAR1Q8IX12 1150 aaKnown RBP26.9■■□□□ 1.9
PTP4A1-203ENST00000473334 TANGO6Q9C0B7 1094 aa26.9■■□□□ 1.9
PTP4A1-203ENST00000473334 OSBPL3Q9H4L5 887 aa26.9■■□□□ 1.9
PTP4A1-203ENST00000473334 HELLSQ9NRZ9 838 aa26.9■■□□□ 1.9
PTP4A1-203ENST00000473334 GJD2Q9UKL4 321 aa26.9■■□□□ 1.9
PTP4A1-203ENST00000473334 RLFQ13129 1914 aa26.89■■□□□ 1.9
PTP4A1-203ENST00000473334 TRIM6-TRIM34B2RNG4 842 aa26.89■■□□□ 1.9
PTP4A1-203ENST00000473334 CCL5P13501 91 aa26.89■■□□□ 1.9
PTP4A1-203ENST00000473334 ATP2B2Q01814 1243 aa26.89■■□□□ 1.9
PTP4A1-203ENST00000473334 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.89■■□□□ 1.9
PTP4A1-203ENST00000473334 PORCNQ9H237 461 aa26.89■■□□□ 1.9
PTP4A1-203ENST00000473334 A0A0G2JMZ2 1700 aa26.89■■□□□ 1.9
PTP4A1-203ENST00000473334 INHAP05111 366 aa26.88■■□□□ 1.89
PTP4A1-203ENST00000473334 CCNA1P78396 465 aa26.88■■□□□ 1.89
PTP4A1-203ENST00000473334 IRX6P78412 446 aaPredicted RBP26.88■■□□□ 1.89
PTP4A1-203ENST00000473334 COG2Q14746 738 aa26.88■■□□□ 1.89
PTP4A1-203ENST00000473334 SPICE1Q8N0Z3 855 aa26.88■■□□□ 1.89
PTP4A1-203ENST00000473334 SOCS4Q8WXH5 440 aa26.88■■□□□ 1.89
PTP4A1-203ENST00000473334 PARP14Q460N5 1801 aa26.88■■□□□ 1.89
PTP4A1-203ENST00000473334 WDR46O15213 610 aaKnown RBP26.87■■□□□ 1.89
PTP4A1-203ENST00000473334 FOXP2O15409 715 aa26.87■■□□□ 1.89
PTP4A1-203ENST00000473334 ZNF444Q8N0Y2 327 aaPredicted RBP26.87■■□□□ 1.89
PTP4A1-203ENST00000473334 RILPL2Q969X0 211 aa26.87■■□□□ 1.89
PTP4A1-203ENST00000473334 NUDT12Q9BQG2 462 aa26.87■■□□□ 1.89
PTP4A1-203ENST00000473334 HOXC10Q9NYD6 342 aa26.87■■□□□ 1.89
PTP4A1-203ENST00000473334 BTBD7Q9P203 1132 aa26.87■■□□□ 1.89
PTP4A1-203ENST00000473334 PRDM1O75626 825 aa26.86■■□□□ 1.89
PTP4A1-203ENST00000473334 SLC3A2P08195 630 aaKnown RBP26.86■■□□□ 1.89
PTP4A1-203ENST00000473334 PPARAQ07869 468 aa26.86■■□□□ 1.89
PTP4A1-203ENST00000473334 GPR142Q7Z601 462 aa26.86■■□□□ 1.89
PTP4A1-203ENST00000473334 FAM227BQ96M60 508 aa26.86■■□□□ 1.89
PTP4A1-203ENST00000473334 RNF208Q9H0X6 261 aa26.86■■□□□ 1.89
PTP4A1-203ENST00000473334 CWC22Q9HCG8 908 aaKnown RBP26.86■■□□□ 1.89
PTP4A1-203ENST00000473334 GOPCQ9HD26 462 aa26.86■■□□□ 1.89
PTP4A1-203ENST00000473334 MKI67P46013 3256 aaKnown RBP26.86■■□□□ 1.89
PTP4A1-203ENST00000473334 MYH4Q9Y623 1939 aa26.85■■□□□ 1.89
PTP4A1-203ENST00000473334 A0A0D9SFI3 127 aa26.85■■□□□ 1.89
PTP4A1-203ENST00000473334 PDE4BQ07343 736 aa26.85■■□□□ 1.89
PTP4A1-203ENST00000473334 MCMDC2Q4G0Z9 681 aa26.85■■□□□ 1.89
PTP4A1-203ENST00000473334 PLEKHH3Q7Z736 793 aa26.85■■□□□ 1.89
PTP4A1-203ENST00000473334 NKX2-3Q8TAU0 364 aa26.85■■□□□ 1.89
PTP4A1-203ENST00000473334 NYAP2Q9P242 653 aa26.85■■□□□ 1.89
PTP4A1-203ENST00000473334 PDE4DIPQ5VU43 2346 aa26.85■■□□□ 1.89
PTP4A1-203ENST00000473334 HMGCRP04035 888 aa26.84■■□□□ 1.89
PTP4A1-203ENST00000473334 GJB1P08034 283 aa26.84■■□□□ 1.89
PTP4A1-203ENST00000473334 DSG3P32926 999 aa26.84■■□□□ 1.89
PTP4A1-203ENST00000473334 VPS53Q5VIR6 699 aa26.84■■□□□ 1.89
PTP4A1-203ENST00000473334 UNC93B1Q9H1C4 597 aa26.84■■□□□ 1.89
PTP4A1-203ENST00000473334 IGKV6D-41A0A0C4DH26 115 aa26.83■■□□□ 1.89
PTP4A1-203ENST00000473334 FLOT1O75955 427 aa26.83■■□□□ 1.89
PTP4A1-203ENST00000473334 CYP2B6P20813 491 aa26.83■■□□□ 1.89
PTP4A1-203ENST00000473334 NMIQ13287 307 aaPredicted RBP26.83■■□□□ 1.89
PTP4A1-203ENST00000473334 PLIN4Q96Q06 1357 aa26.83■■□□□ 1.88
PTP4A1-203ENST00000473334 XRCC5P13010 732 aaKnown RBP26.82■■□□□ 1.88
PTP4A1-203ENST00000473334 GJA8P48165 433 aa26.82■■□□□ 1.88
PTP4A1-203ENST00000473334 MORN1Q5T089 497 aa26.82■■□□□ 1.88
PTP4A1-203ENST00000473334 MB21D1Q8N884 522 aa26.82■■□□□ 1.88
PTP4A1-203ENST00000473334 USP6NLQ92738 828 aa26.82■■□□□ 1.88
PTP4A1-203ENST00000473334 SHISA4Q96DD7 197 aa26.82■■□□□ 1.88
PTP4A1-203ENST00000473334 RAD21O60216 631 aa26.81■■□□□ 1.88
PTP4A1-203ENST00000473334 RGS2P41220 211 aa26.81■■□□□ 1.88
PTP4A1-203ENST00000473334 ALX1Q15699 326 aa26.81■■□□□ 1.88
PTP4A1-203ENST00000473334 WDR78Q5VTH9 848 aa26.81■■□□□ 1.88
PTP4A1-203ENST00000473334 ATG4CQ96DT6 458 aa26.81■■□□□ 1.88
PTP4A1-203ENST00000473334 TSPY3P0CV98 308 aa26.8■■□□□ 1.88
PTP4A1-203ENST00000473334 TSPY8P0CW00 308 aa26.8■■□□□ 1.88
PTP4A1-203ENST00000473334 SDSP20132 328 aa26.8■■□□□ 1.88
PTP4A1-203ENST00000473334 TRMT44Q8IYL2 757 aaKnown RBP26.8■■□□□ 1.88
PTP4A1-203ENST00000473334 NEDD1Q8NHV4 660 aa26.8■■□□□ 1.88
PTP4A1-203ENST00000473334 TRIB2Q92519 343 aa26.8■■□□□ 1.88
PTP4A1-203ENST00000473334 CEP95Q96GE4 821 aa26.8■■□□□ 1.88
PTP4A1-203ENST00000473334 SPATC1LQ9H0A9 340 aa26.8■■□□□ 1.88
PTP4A1-203ENST00000473334 CLIP2Q9UDT6 1046 aa26.8■■□□□ 1.88
PTP4A1-203ENST00000473334 COL11A1P12107 1806 aaPredicted RBP26.79■■□□□ 1.88
PTP4A1-203ENST00000473334 CTDSPL2Q05D32 466 aa26.79■■□□□ 1.88
PTP4A1-203ENST00000473334 FAM83BQ5T0W9 1011 aa26.79■■□□□ 1.88
PTP4A1-203ENST00000473334 ZNF589Q86UQ0 364 aaPredicted RBP26.79■■□□□ 1.88
PTP4A1-203ENST00000473334 U2AF1L4Q8WU68 220 aaKnown RBP26.79■■□□□ 1.88
PTP4A1-203ENST00000473334 APBA2Q99767 749 aa26.79■■□□□ 1.88
PTP4A1-203ENST00000473334 MOV10L1Q9BXT6 1211 aaKnown RBP26.79■■□□□ 1.88
PTP4A1-203ENST00000473334 MTMR4Q9NYA4 1195 aa26.79■■□□□ 1.88
PTP4A1-203ENST00000473334 ANAPC4Q9UJX5 808 aa26.79■■□□□ 1.88
PTP4A1-203ENST00000473334 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.79■■□□□ 1.88
PTP4A1-203ENST00000473334 IVNS1ABPQ9Y6Y0 642 aa26.79■■□□□ 1.88
PTP4A1-203ENST00000473334 CCDC171Q6TFL3 1326 aa26.79■■□□□ 1.88
PTP4A1-203ENST00000473334 SLC15A5A6NIM6 579 aa26.78■■□□□ 1.88
PTP4A1-203ENST00000473334 HSPD1P10809 573 aaKnown RBP26.78■■□□□ 1.88
PTP4A1-203ENST00000473334 PTPREP23469 700 aa26.78■■□□□ 1.88
PTP4A1-203ENST00000473334 TFAP4Q01664 338 aa26.78■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms