RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 TICAM2Q86XR7 235 aa16.83■□□□□ 0.28
COMMD3-208ENST00000470045 RPAP3Q9H6T3 665 aaPredicted RBP16.83■□□□□ 0.28
COMMD3-208ENST00000470045 ARHGEF10LQ9HCE6 1279 aa16.83■□□□□ 0.28
COMMD3-208ENST00000470045 GJD2Q9UKL4 321 aa16.83■□□□□ 0.28
COMMD3-208ENST00000470045 MYH4Q9Y623 1939 aa16.82■□□□□ 0.28
COMMD3-208ENST00000470045 SPDYE16A6NNV3 312 aaPredicted RBP16.82■□□□□ 0.28
COMMD3-208ENST00000470045 FOXP2O15409 715 aa16.82■□□□□ 0.28
COMMD3-208ENST00000470045 CNMDO75829 334 aa16.82■□□□□ 0.28
COMMD3-208ENST00000470045 MYCNP04198 464 aaPredicted RBP16.82■□□□□ 0.28
COMMD3-208ENST00000470045 EN2P19622 333 aaPredicted RBP16.82■□□□□ 0.28
COMMD3-208ENST00000470045 TDO2P48775 406 aa16.82■□□□□ 0.28
COMMD3-208ENST00000470045 MTFR1Q15390 333 aa16.82■□□□□ 0.28
COMMD3-208ENST00000470045 KIAA1755Q5JYT7 1200 aa16.82■□□□□ 0.28
COMMD3-208ENST00000470045 CHD1LQ86WJ1 897 aa16.82■□□□□ 0.28
COMMD3-208ENST00000470045 IFNL3Q8IZI9 196 aa16.82■□□□□ 0.28
COMMD3-208ENST00000470045 LPAR1Q92633 364 aa16.82■□□□□ 0.28
COMMD3-208ENST00000470045 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.82■□□□□ 0.28
COMMD3-208ENST00000470045 OSBPL3Q9H4L5 887 aa16.82■□□□□ 0.28
COMMD3-208ENST00000470045 SH2D4AQ9H788 454 aa16.82■□□□□ 0.28
COMMD3-208ENST00000470045 RABGAP1Q9Y3P9 1069 aa16.82■□□□□ 0.28
COMMD3-208ENST00000470045 ZNF236Q9UL36 1845 aa16.82■□□□□ 0.28
COMMD3-208ENST00000470045 ELNP15502 786 aa16.81■□□□□ 0.28
COMMD3-208ENST00000470045 MAPK4P31152 587 aa16.81■□□□□ 0.28
COMMD3-208ENST00000470045 Q3C1V9 767 aa16.81■□□□□ 0.28
COMMD3-208ENST00000470045 PAGR1Q9BTK6 254 aa16.81■□□□□ 0.28
COMMD3-208ENST00000470045 PORCNQ9H237 461 aa16.81■□□□□ 0.28
COMMD3-208ENST00000470045 VCPKMTQ9H867 229 aa16.81■□□□□ 0.28
COMMD3-208ENST00000470045 KANSL2Q9H9L4 492 aa16.81■□□□□ 0.28
COMMD3-208ENST00000470045 PLIN4Q96Q06 1357 aa16.8■□□□□ 0.28
COMMD3-208ENST00000470045 COL11A1P12107 1806 aaPredicted RBP16.8■□□□□ 0.28
COMMD3-208ENST00000470045 MINDY4BA8MYZ0 360 aa16.8■□□□□ 0.28
COMMD3-208ENST00000470045 MYCP01106 439 aaPredicted RBP16.8■□□□□ 0.28
COMMD3-208ENST00000470045 CCL5P13501 91 aa16.8■□□□□ 0.28
COMMD3-208ENST00000470045 EEF2P13639 858 aaKnown RBP16.8■□□□□ 0.28
COMMD3-208ENST00000470045 UBXN2AP68543 259 aa16.8■□□□□ 0.28
COMMD3-208ENST00000470045 B4GALNT3Q6L9W6 998 aa16.8■□□□□ 0.28
COMMD3-208ENST00000470045 PLEKHM2Q8IWE5 1019 aa16.8■□□□□ 0.28
COMMD3-208ENST00000470045 SHISA4Q96DD7 197 aa16.8■□□□□ 0.28
COMMD3-208ENST00000470045 NACAP1Q9BZK3 213 aa16.8■□□□□ 0.28
COMMD3-208ENST00000470045 MKI67P46013 3256 aaKnown RBP16.8■□□□□ 0.28
COMMD3-208ENST00000470045 IGKV6D-41A0A0C4DH26 115 aa16.79■□□□□ 0.28
COMMD3-208ENST00000470045 APPP05067 770 aa16.79■□□□□ 0.28
COMMD3-208ENST00000470045 INHAP05111 366 aa16.79■□□□□ 0.28
COMMD3-208ENST00000470045 GJB1P08034 283 aa16.79■□□□□ 0.28
COMMD3-208ENST00000470045 CCDC129Q6ZRS4 1044 aa16.79■□□□□ 0.28
COMMD3-208ENST00000470045 SOCS4Q8WXH5 440 aa16.79■□□□□ 0.28
COMMD3-208ENST00000470045 USP6NLQ92738 828 aa16.79■□□□□ 0.28
COMMD3-208ENST00000470045 HELLSQ9NRZ9 838 aa16.79■□□□□ 0.28
COMMD3-208ENST00000470045 BTBD7Q9P203 1132 aa16.79■□□□□ 0.28
COMMD3-208ENST00000470045 WDR46O15213 610 aaKnown RBP16.78■□□□□ 0.28
COMMD3-208ENST00000470045 COG2Q14746 738 aa16.78■□□□□ 0.28
COMMD3-208ENST00000470045 GPR142Q7Z601 462 aa16.78■□□□□ 0.28
COMMD3-208ENST00000470045 TANGO6Q9C0B7 1094 aa16.78■□□□□ 0.28
COMMD3-208ENST00000470045 NAPBQ9H115 298 aa16.78■□□□□ 0.28
COMMD3-208ENST00000470045 MKNK2Q9HBH9 465 aa16.78■□□□□ 0.28
COMMD3-208ENST00000470045 ZNF287Q9HBT7 754 aa16.78■□□□□ 0.28
COMMD3-208ENST00000470045 NYAP2Q9P242 653 aa16.78■□□□□ 0.28
COMMD3-208ENST00000470045 BIN2Q9UBW5 565 aaPredicted RBP16.78■□□□□ 0.28
COMMD3-208ENST00000470045 A0A0D9SFI3 127 aa16.77■□□□□ 0.28
COMMD3-208ENST00000470045 HMGCRP04035 888 aa16.77■□□□□ 0.28
COMMD3-208ENST00000470045 XRCC5P13010 732 aaKnown RBP16.77■□□□□ 0.28
COMMD3-208ENST00000470045 GJA8P48165 433 aa16.77■□□□□ 0.28
COMMD3-208ENST00000470045 CCNA1P78396 465 aa16.77■□□□□ 0.28
COMMD3-208ENST00000470045 PPARAQ07869 468 aa16.77■□□□□ 0.28
COMMD3-208ENST00000470045 MORN1Q5T089 497 aa16.77■□□□□ 0.28
COMMD3-208ENST00000470045 SPICE1Q8N0Z3 855 aa16.77■□□□□ 0.28
COMMD3-208ENST00000470045 NKX2-3Q8TAU0 364 aa16.77■□□□□ 0.28
COMMD3-208ENST00000470045 FAM227BQ96M60 508 aa16.77■□□□□ 0.28
COMMD3-208ENST00000470045 NUDT12Q9BQG2 462 aa16.77■□□□□ 0.28
COMMD3-208ENST00000470045 UNC93B1Q9H1C4 597 aa16.77■□□□□ 0.28
COMMD3-208ENST00000470045 HOXC10Q9NYD6 342 aa16.77■□□□□ 0.28
COMMD3-208ENST00000470045 LAMA4Q16363 1823 aa16.77■□□□□ 0.27
COMMD3-208ENST00000470045 ALX1Q15699 326 aa16.76■□□□□ 0.27
COMMD3-208ENST00000470045 VPS53Q5VIR6 699 aa16.76■□□□□ 0.27
COMMD3-208ENST00000470045 PLEKHH3Q7Z736 793 aa16.76■□□□□ 0.27
COMMD3-208ENST00000470045 STK11IPQ8N1F8 1099 aa16.76■□□□□ 0.27
COMMD3-208ENST00000470045 MB21D1Q8N884 522 aa16.76■□□□□ 0.27
COMMD3-208ENST00000470045 TRIB2Q92519 343 aa16.76■□□□□ 0.27
COMMD3-208ENST00000470045 RNF208Q9H0X6 261 aa16.76■□□□□ 0.27
COMMD3-208ENST00000470045 GOPCQ9HD26 462 aa16.76■□□□□ 0.27
COMMD3-208ENST00000470045 PAK6Q9NQU5 681 aaPredicted RBP16.76■□□□□ 0.27
COMMD3-208ENST00000470045 SYNPO2Q9UMS6 1093 aa16.76■□□□□ 0.27
COMMD3-208ENST00000470045 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.76■□□□□ 0.27
COMMD3-208ENST00000470045 ZMYM6O95789 1325 aa16.75■□□□□ 0.27
COMMD3-208ENST00000470045 PRDM1O75626 825 aa16.75■□□□□ 0.27
COMMD3-208ENST00000470045 MCMDC2Q4G0Z9 681 aa16.75■□□□□ 0.27
COMMD3-208ENST00000470045 UBE2Q1Q7Z7E8 422 aa16.75■□□□□ 0.27
COMMD3-208ENST00000470045 ANAPC4Q9UJX5 808 aa16.75■□□□□ 0.27
COMMD3-208ENST00000470045 ADAMTS5Q9UNA0 930 aa16.75■□□□□ 0.27
COMMD3-208ENST00000470045 TRIM6-TRIM34B2RNG4 842 aa16.74■□□□□ 0.27
COMMD3-208ENST00000470045 FLOT1O75955 427 aa16.74■□□□□ 0.27
COMMD3-208ENST00000470045 SLC3A2P08195 630 aaKnown RBP16.74■□□□□ 0.27
COMMD3-208ENST00000470045 CAPN2P17655 700 aa16.74■□□□□ 0.27
COMMD3-208ENST00000470045 RGS2P41220 211 aa16.74■□□□□ 0.27
COMMD3-208ENST00000470045 FXR2P51116 673 aaKnown RBP eCLIP16.74■□□□□ 0.27
COMMD3-208ENST00000470045 ATP2B2Q01814 1243 aa16.74■□□□□ 0.27
COMMD3-208ENST00000470045 PDE4BQ07343 736 aa16.74■□□□□ 0.27
COMMD3-208ENST00000470045 NMIQ13287 307 aaPredicted RBP16.74■□□□□ 0.27
COMMD3-208ENST00000470045 MAP3K21Q5TCX8 1036 aa16.74■□□□□ 0.27
COMMD3-208ENST00000470045 PRPF38BQ5VTL8 546 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms